RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
ARPC1B-216ENST00000474880 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
ARPC1B-216ENST00000474880 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
ARPC1B-216ENST00000474880 KIAA0586Q9BVV6 1533 aa18.87■□□□□ 0.61
ARPC1B-216ENST00000474880 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
ARPC1B-216ENST00000474880 IQGAP2Q13576 1575 aa18.75■□□□□ 0.59
ARPC1B-216ENST00000474880 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
ARPC1B-216ENST00000474880 KIF13AQ9H1H9 1805 aa18.7■□□□□ 0.58
ARPC1B-216ENST00000474880 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
ARPC1B-216ENST00000474880 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
ARPC1B-216ENST00000474880 PTPRGP23470 1445 aa18.65■□□□□ 0.58
ARPC1B-216ENST00000474880 DISP1Q96F81 1524 aa18.64■□□□□ 0.57
ARPC1B-216ENST00000474880 TNIKQ9UKE5 1360 aa18.63■□□□□ 0.57
ARPC1B-216ENST00000474880 UGGT2Q9NYU1 1516 aa18.63■□□□□ 0.57
ARPC1B-216ENST00000474880 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
ARPC1B-216ENST00000474880 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
ARPC1B-216ENST00000474880 MAPKBP1O60336 1514 aa18.61■□□□□ 0.57
ARPC1B-216ENST00000474880 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
ARPC1B-216ENST00000474880 KIAA0556O60303 1618 aa18.57■□□□□ 0.56
ARPC1B-216ENST00000474880 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
ARPC1B-216ENST00000474880 DIP2BQ9P265 1576 aa18.55■□□□□ 0.56
ARPC1B-216ENST00000474880 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
ARPC1B-216ENST00000474880 EEA1Q15075 1411 aa18.54■□□□□ 0.56
ARPC1B-216ENST00000474880 FAM69CQ0P6D2 419 aa18.53■□□□□ 0.56
ARPC1B-216ENST00000474880 ABCC2Q92887 1545 aa18.53■□□□□ 0.56
ARPC1B-216ENST00000474880 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
ARPC1B-216ENST00000474880 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
ARPC1B-216ENST00000474880 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
ARPC1B-216ENST00000474880 TSPOAP1O95153 1857 aa18.49■□□□□ 0.55
ARPC1B-216ENST00000474880 GOLGA3Q08378 1498 aa18.47■□□□□ 0.55
ARPC1B-216ENST00000474880 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
ARPC1B-216ENST00000474880 ASXL2Q76L83 1435 aa18.44■□□□□ 0.54
ARPC1B-216ENST00000474880 ZCCHC11Q5TAX3 1644 aaKnown RBP18.44■□□□□ 0.54
ARPC1B-216ENST00000474880 PLB1Q6P1J6 1458 aa18.42■□□□□ 0.54
ARPC1B-216ENST00000474880 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
ARPC1B-216ENST00000474880 ABCA8O94911 1581 aa18.39■□□□□ 0.53
ARPC1B-216ENST00000474880 GLI2P10070 1586 aa18.38■□□□□ 0.53
ARPC1B-216ENST00000474880 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
ARPC1B-216ENST00000474880 PPRC1Q5VV67 1664 aaKnown RBP18.36■□□□□ 0.53
ARPC1B-216ENST00000474880 KIF21BO75037 1637 aa18.35■□□□□ 0.53
ARPC1B-216ENST00000474880 P3H3Q8IVL6 736 aa18.35■□□□□ 0.53
ARPC1B-216ENST00000474880 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.53
ARPC1B-216ENST00000474880 KDM6BO15054 1643 aa18.32■□□□□ 0.52
ARPC1B-216ENST00000474880 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
ARPC1B-216ENST00000474880 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
ARPC1B-216ENST00000474880 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.52
ARPC1B-216ENST00000474880 RAPGEF6Q8TEU7 1601 aa18.25■□□□□ 0.51
ARPC1B-216ENST00000474880 ATP10BO94823 1461 aa18.23■□□□□ 0.51
ARPC1B-216ENST00000474880 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
ARPC1B-216ENST00000474880 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
ARPC1B-216ENST00000474880 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
ARPC1B-216ENST00000474880 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
ARPC1B-216ENST00000474880 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
ARPC1B-216ENST00000474880 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
ARPC1B-216ENST00000474880 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
ARPC1B-216ENST00000474880 TEX14Q8IWB6 1497 aa18.19■□□□□ 0.5
ARPC1B-216ENST00000474880 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
ARPC1B-216ENST00000474880 COL17A1Q9UMD9 1497 aaPredicted RBP18.18■□□□□ 0.5
ARPC1B-216ENST00000474880 NUP153P49790 1475 aaKnown RBP18.16■□□□□ 0.5
ARPC1B-216ENST00000474880 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
ARPC1B-216ENST00000474880 MAGI3Q5TCQ9 1506 aa18.13■□□□□ 0.49
ARPC1B-216ENST00000474880 ABCA9Q8IUA7 1624 aa18.11■□□□□ 0.49
ARPC1B-216ENST00000474880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
ARPC1B-216ENST00000474880 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
ARPC1B-216ENST00000474880 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.49
ARPC1B-216ENST00000474880 KDM4FA0A1W2PPD8 638 aa18.04■□□□□ 0.48
ARPC1B-216ENST00000474880 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
ARPC1B-216ENST00000474880 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
ARPC1B-216ENST00000474880 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
ARPC1B-216ENST00000474880 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
ARPC1B-216ENST00000474880 HECW1Q76N89 1606 aa17.98■□□□□ 0.47
ARPC1B-216ENST00000474880 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
ARPC1B-216ENST00000474880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
ARPC1B-216ENST00000474880 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.46
ARPC1B-216ENST00000474880 NEO1Q92859 1461 aa17.95■□□□□ 0.46
ARPC1B-216ENST00000474880 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
ARPC1B-216ENST00000474880 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
ARPC1B-216ENST00000474880 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
ARPC1B-216ENST00000474880 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
ARPC1B-216ENST00000474880 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
ARPC1B-216ENST00000474880 CLIP1P30622 1438 aa17.89■□□□□ 0.46
ARPC1B-216ENST00000474880 PCF11O94913 1555 aaKnown RBP17.89■□□□□ 0.45
ARPC1B-216ENST00000474880 CFAP74Q9C0B2 1584 aa17.88■□□□□ 0.45
ARPC1B-216ENST00000474880 FANCAO15360 1455 aa17.88■□□□□ 0.45
ARPC1B-216ENST00000474880 KIF14Q15058 1648 aa17.87■□□□□ 0.45
ARPC1B-216ENST00000474880 RICTORQ6R327 1708 aa17.87■□□□□ 0.45
ARPC1B-216ENST00000474880 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
ARPC1B-216ENST00000474880 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
ARPC1B-216ENST00000474880 MYO5CQ9NQX4 1742 aa17.86■□□□□ 0.45
ARPC1B-216ENST00000474880 CDK11AQ9UQ88 783 aaPredicted RBP17.85■□□□□ 0.45
ARPC1B-216ENST00000474880 TROQ12816 1431 aaPredicted RBP17.84■□□□□ 0.45
ARPC1B-216ENST00000474880 PLCH2O75038 1416 aa17.83■□□□□ 0.45
ARPC1B-216ENST00000474880 DENND4BO75064 1496 aaPredicted RBP17.82■□□□□ 0.44
ARPC1B-216ENST00000474880 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
ARPC1B-216ENST00000474880 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
ARPC1B-216ENST00000474880 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
ARPC1B-216ENST00000474880 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
ARPC1B-216ENST00000474880 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.44
ARPC1B-216ENST00000474880 ZMYM4Q5VZL5 1548 aa17.76■□□□□ 0.43
ARPC1B-216ENST00000474880 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms