RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
HPS1-210ENST00000474873 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
HPS1-210ENST00000474873 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
HPS1-210ENST00000474873 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
HPS1-210ENST00000474873 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
HPS1-210ENST00000474873 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
HPS1-210ENST00000474873 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
HPS1-210ENST00000474873 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
HPS1-210ENST00000474873 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
HPS1-210ENST00000474873 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
HPS1-210ENST00000474873 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
HPS1-210ENST00000474873 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
HPS1-210ENST00000474873 ERCC6L2Q5T890 1561 aa13.26□□□□□ -0.29
HPS1-210ENST00000474873 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
HPS1-210ENST00000474873 KIF21BO75037 1637 aa13.22□□□□□ -0.29
HPS1-210ENST00000474873 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
HPS1-210ENST00000474873 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
HPS1-210ENST00000474873 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
HPS1-210ENST00000474873 PTPRGP23470 1445 aa13.17□□□□□ -0.3
HPS1-210ENST00000474873 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
HPS1-210ENST00000474873 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
HPS1-210ENST00000474873 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
HPS1-210ENST00000474873 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
HPS1-210ENST00000474873 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
HPS1-210ENST00000474873 TTBK1Q5TCY1 1321 aaPredicted RBP13.11□□□□□ -0.31
HPS1-210ENST00000474873 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
HPS1-210ENST00000474873 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
HPS1-210ENST00000474873 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
HPS1-210ENST00000474873 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
HPS1-210ENST00000474873 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
HPS1-210ENST00000474873 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
HPS1-210ENST00000474873 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
HPS1-210ENST00000474873 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
HPS1-210ENST00000474873 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
HPS1-210ENST00000474873 PLB1Q6P1J6 1458 aa13.01□□□□□ -0.33
HPS1-210ENST00000474873 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
HPS1-210ENST00000474873 ABCA8O94911 1581 aa12.99□□□□□ -0.33
HPS1-210ENST00000474873 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
HPS1-210ENST00000474873 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
HPS1-210ENST00000474873 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
HPS1-210ENST00000474873 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
HPS1-210ENST00000474873 FMN1Q68DA7 1419 aa12.95□□□□□ -0.34
HPS1-210ENST00000474873 CLIP1P30622 1438 aa12.94□□□□□ -0.34
HPS1-210ENST00000474873 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
HPS1-210ENST00000474873 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
HPS1-210ENST00000474873 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
HPS1-210ENST00000474873 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
HPS1-210ENST00000474873 ATP10BO94823 1461 aa12.91□□□□□ -0.34
HPS1-210ENST00000474873 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
HPS1-210ENST00000474873 NUP153P49790 1475 aaKnown RBP12.91□□□□□ -0.34
HPS1-210ENST00000474873 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.34
HPS1-210ENST00000474873 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
HPS1-210ENST00000474873 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
HPS1-210ENST00000474873 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
HPS1-210ENST00000474873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
HPS1-210ENST00000474873 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
HPS1-210ENST00000474873 DIP2BQ9P265 1576 aa12.87□□□□□ -0.35
HPS1-210ENST00000474873 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
HPS1-210ENST00000474873 KIF13AQ9H1H9 1805 aa12.86□□□□□ -0.35
HPS1-210ENST00000474873 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
HPS1-210ENST00000474873 EPRSP07814 1512 aaKnown RBP12.85□□□□□ -0.35
HPS1-210ENST00000474873 CASKIN1Q8WXD9 1431 aa12.85□□□□□ -0.35
HPS1-210ENST00000474873 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
HPS1-210ENST00000474873 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
HPS1-210ENST00000474873 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
HPS1-210ENST00000474873 GLI2P10070 1586 aa12.84□□□□□ -0.35
HPS1-210ENST00000474873 SOCS7O14512 581 aa12.83□□□□□ -0.36
HPS1-210ENST00000474873 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
HPS1-210ENST00000474873 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
HPS1-210ENST00000474873 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
HPS1-210ENST00000474873 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
HPS1-210ENST00000474873 PCF11O94913 1555 aaKnown RBP12.78□□□□□ -0.36
HPS1-210ENST00000474873 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
HPS1-210ENST00000474873 CD109Q6YHK3 1445 aa12.77□□□□□ -0.37
HPS1-210ENST00000474873 MAP3K4Q9Y6R4 1608 aa12.76□□□□□ -0.37
HPS1-210ENST00000474873 ILDR2Q71H61 639 aa12.75□□□□□ -0.37
HPS1-210ENST00000474873 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
HPS1-210ENST00000474873 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
HPS1-210ENST00000474873 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
HPS1-210ENST00000474873 TEX14Q8IWB6 1497 aa12.73□□□□□ -0.37
HPS1-210ENST00000474873 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
HPS1-210ENST00000474873 VPS8Q8N3P4 1428 aa12.73□□□□□ -0.37
HPS1-210ENST00000474873 LRRIQ1Q96JM4 1722 aa12.73□□□□□ -0.37
HPS1-210ENST00000474873 ABCA9Q8IUA7 1624 aa12.73□□□□□ -0.37
HPS1-210ENST00000474873 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
HPS1-210ENST00000474873 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.37
HPS1-210ENST00000474873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.69□□□□□ -0.38
HPS1-210ENST00000474873 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
HPS1-210ENST00000474873 KIF14Q15058 1648 aa12.66□□□□□ -0.38
HPS1-210ENST00000474873 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
HPS1-210ENST00000474873 NEO1Q92859 1461 aa12.65□□□□□ -0.38
HPS1-210ENST00000474873 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
HPS1-210ENST00000474873 PLCH2O75038 1416 aa12.65□□□□□ -0.38
HPS1-210ENST00000474873 KDM6BO15054 1643 aa12.65□□□□□ -0.38
HPS1-210ENST00000474873 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
HPS1-210ENST00000474873 APLP2Q06481 763 aa12.63□□□□□ -0.39
HPS1-210ENST00000474873 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
HPS1-210ENST00000474873 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
HPS1-210ENST00000474873 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
HPS1-210ENST00000474873 TIAM1Q13009 1591 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms