RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
EDEM3-206ENST00000474725 FBLN2P98095 1184 aa32.22■■■□□ 2.75
EDEM3-206ENST00000474725 ARHGAP35Q9NRY4 1499 aa32.11■■■□□ 2.73
EDEM3-206ENST00000474725 CEP170Q5SW79 1584 aa32.06■■■□□ 2.72
EDEM3-206ENST00000474725 ARAP1Q96P48 1450 aa32.06■■■□□ 2.72
EDEM3-206ENST00000474725 KIAA0586Q9BVV6 1533 aa32.04■■■□□ 2.72
EDEM3-206ENST00000474725 IQGAP2Q13576 1575 aa32.04■■■□□ 2.72
EDEM3-206ENST00000474725 NUP160Q12769 1436 aa32.03■■■□□ 2.72
EDEM3-206ENST00000474725 CHD1O14646 1710 aa32.03■■■□□ 2.72
EDEM3-206ENST00000474725 VPS8Q8N3P4 1428 aa31.97■■■□□ 2.71
EDEM3-206ENST00000474725 P3H3Q8IVL6 736 aa31.97■■■□□ 2.71
EDEM3-206ENST00000474725 EFCAB5A4FU69 1503 aa31.97■■■□□ 2.71
EDEM3-206ENST00000474725 SAMD9Q5K651 1589 aa31.91■■■□□ 2.7
EDEM3-206ENST00000474725 UGGT2Q9NYU1 1516 aa31.89■■■□□ 2.7
EDEM3-206ENST00000474725 FHOD3Q2V2M9 1422 aa31.89■■■□□ 2.7
EDEM3-206ENST00000474725 JPH4Q96JJ6 628 aa31.81■■■□□ 2.68
EDEM3-206ENST00000474725 DISP1Q96F81 1524 aa31.76■■■□□ 2.68
EDEM3-206ENST00000474725 PPARGC1BQ86YN6 1023 aaKnown RBP31.73■■■□□ 2.67
EDEM3-206ENST00000474725 KIAA0556O60303 1618 aa31.72■■■□□ 2.67
EDEM3-206ENST00000474725 FMN1Q68DA7 1419 aa31.69■■■□□ 2.66
EDEM3-206ENST00000474725 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
EDEM3-206ENST00000474725 APLP2Q06481 763 aa31.66■■■□□ 2.66
EDEM3-206ENST00000474725 PCF11O94913 1555 aaKnown RBP31.64■■■□□ 2.66
EDEM3-206ENST00000474725 CARMIL2Q6F5E8 1435 aa31.64■■■□□ 2.66
EDEM3-206ENST00000474725 SHROOM2Q13796 1616 aa31.62■■■□□ 2.65
EDEM3-206ENST00000474725 PRG4Q92954 1404 aaPredicted RBP31.62■■■□□ 2.65
EDEM3-206ENST00000474725 CASKIN1Q8WXD9 1431 aa31.6■■■□□ 2.65
EDEM3-206ENST00000474725 ATP1B4Q9UN42 357 aaPredicted RBP31.58■■■□□ 2.65
EDEM3-206ENST00000474725 TTBK1Q5TCY1 1321 aaPredicted RBP31.57■■■□□ 2.65
EDEM3-206ENST00000474725 FYCO1Q9BQS8 1478 aa31.57■■■□□ 2.64
EDEM3-206ENST00000474725 OSCARQ8IYS5 282 aa31.55■■■□□ 2.64
EDEM3-206ENST00000474725 ERCC6L2Q5T890 1561 aa31.46■■■□□ 2.63
EDEM3-206ENST00000474725 KANK4Q5T7N3 995 aaPredicted RBP31.46■■■□□ 2.63
EDEM3-206ENST00000474725 MAP3K1Q13233 1512 aa31.46■■■□□ 2.63
EDEM3-206ENST00000474725 TIAM1Q13009 1591 aa31.45■■■□□ 2.63
EDEM3-206ENST00000474725 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
EDEM3-206ENST00000474725 LRRIQ1Q96JM4 1722 aa31.4■■■□□ 2.62
EDEM3-206ENST00000474725 HECW1Q76N89 1606 aa31.39■■■□□ 2.62
EDEM3-206ENST00000474725 CFAP43Q8NDM7 1665 aa31.39■■■□□ 2.62
EDEM3-206ENST00000474725 PTPRGP23470 1445 aa31.39■■■□□ 2.61
EDEM3-206ENST00000474725 RAPGEF6Q8TEU7 1601 aa31.38■■■□□ 2.61
EDEM3-206ENST00000474725 PLB1Q6P1J6 1458 aa31.37■■■□□ 2.61
EDEM3-206ENST00000474725 PCGF6Q9BYE7 350 aa31.32■■■□□ 2.6
EDEM3-206ENST00000474725 LRRC9Q6ZRR7 1453 aa31.32■■■□□ 2.6
EDEM3-206ENST00000474725 EPRSP07814 1512 aaKnown RBP31.31■■■□□ 2.6
EDEM3-206ENST00000474725 NUP153P49790 1475 aaKnown RBP31.31■■■□□ 2.6
EDEM3-206ENST00000474725 ABCA8O94911 1581 aa31.3■■■□□ 2.6
EDEM3-206ENST00000474725 CCDC18Q5T9S5 1454 aa31.3■■■□□ 2.6
EDEM3-206ENST00000474725 ARID3CA6NKF2 412 aa31.29■■■□□ 2.6
EDEM3-206ENST00000474725 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.59
EDEM3-206ENST00000474725 UACAQ9BZF9 1416 aa31.2■■■□□ 2.58
EDEM3-206ENST00000474725 MTUS2Q5JR59 1369 aa31.18■■■□□ 2.58
EDEM3-206ENST00000474725 MAGI3Q5TCQ9 1506 aa31.15■■■□□ 2.58
EDEM3-206ENST00000474725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.15■■■□□ 2.58
EDEM3-206ENST00000474725 HNRNPUL2Q1KMD3 747 aaKnown RBP31.15■■■□□ 2.58
EDEM3-206ENST00000474725 ATP10BO94823 1461 aa31.11■■■□□ 2.57
EDEM3-206ENST00000474725 EHBP1L1Q8N3D4 1523 aa31.1■■■□□ 2.57
EDEM3-206ENST00000474725 ABCC2Q92887 1545 aa31.09■■■□□ 2.57
EDEM3-206ENST00000474725 CDK11AQ9UQ88 783 aaPredicted RBP31.06■■■□□ 2.56
EDEM3-206ENST00000474725 UHRF1BP1LA0JNW5 1464 aa31.04■■■□□ 2.56
EDEM3-206ENST00000474725 PHLDB1Q86UU1 1377 aa31.03■■■□□ 2.56
EDEM3-206ENST00000474725 SUPT6HQ7KZ85 1726 aaKnown RBP31.01■■■□□ 2.55
EDEM3-206ENST00000474725 ARHGEF11O15085 1522 aa31■■■□□ 2.55
EDEM3-206ENST00000474725 NCOA2Q15596 1464 aa31■■■□□ 2.55
EDEM3-206ENST00000474725 TROQ12816 1431 aaPredicted RBP30.96■■■□□ 2.55
EDEM3-206ENST00000474725 RRBP1Q9P2E9 1410 aaKnown RBP30.96■■■□□ 2.55
EDEM3-206ENST00000474725 PLEKHD1A6NEE1 506 aa30.95■■■□□ 2.55
EDEM3-206ENST00000474725 ADCY10Q96PN6 1610 aa30.94■■■□□ 2.54
EDEM3-206ENST00000474725 KDM5BQ9UGL1 1544 aa30.91■■■□□ 2.54
EDEM3-206ENST00000474725 CCNB3Q8WWL7 1395 aa30.9■■■□□ 2.54
EDEM3-206ENST00000474725 ZCCHC11Q5TAX3 1644 aaKnown RBP30.89■■■□□ 2.54
EDEM3-206ENST00000474725 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
EDEM3-206ENST00000474725 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
EDEM3-206ENST00000474725 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
EDEM3-206ENST00000474725 MYOM3Q5VTT5 1437 aa30.85■■■□□ 2.53
EDEM3-206ENST00000474725 KIF14Q15058 1648 aa30.83■■■□□ 2.53
EDEM3-206ENST00000474725 FGD6Q6ZV73 1430 aa30.82■■■□□ 2.52
EDEM3-206ENST00000474725 FAM50AQ14320 339 aaKnown RBP30.77■■■□□ 2.52
EDEM3-206ENST00000474725 CYB5RLQ6IPT4 315 aa30.76■■■□□ 2.51
EDEM3-206ENST00000474725 ABCC10Q5T3U5 1492 aa30.72■■■□□ 2.51
EDEM3-206ENST00000474725 NPM1P06748 294 aaKnown RBP eCLIP30.71■■■□□ 2.51
EDEM3-206ENST00000474725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.7■■■□□ 2.5
EDEM3-206ENST00000474725 MIA2Q96PC5 1412 aa30.69■■■□□ 2.5
EDEM3-206ENST00000474725 KCNH8Q96L42 1107 aa30.69■■■□□ 2.5
EDEM3-206ENST00000474725 GPATCH8Q9UKJ3 1502 aaKnown RBP30.68■■■□□ 2.5
EDEM3-206ENST00000474725 PTPN23Q9H3S7 1636 aa30.68■■■□□ 2.5
EDEM3-206ENST00000474725 ITGAEP38570 1179 aa30.67■■■□□ 2.5
EDEM3-206ENST00000474725 TCOF1Q13428 1488 aaKnown RBP30.64■■■□□ 2.49
EDEM3-206ENST00000474725 ITSN2Q9NZM3 1697 aa30.63■■■□□ 2.49
EDEM3-206ENST00000474725 WDR7Q9Y4E6 1490 aa30.63■■■□□ 2.49
EDEM3-206ENST00000474725 ASXL2Q76L83 1435 aa30.63■■■□□ 2.49
EDEM3-206ENST00000474725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.62■■■□□ 2.498e-9■■■■■ 57.3
EDEM3-206ENST00000474725 CFDP1Q9UEE9 299 aaPredicted RBP30.61■■■□□ 2.49
EDEM3-206ENST00000474725 CDC42BPAQ5VT25 1732 aa30.61■■■□□ 2.49
EDEM3-206ENST00000474725 TTC37Q6PGP7 1564 aa30.58■■■□□ 2.49
EDEM3-206ENST00000474725 ZNF644Q9H582 1327 aaPredicted RBP30.56■■■□□ 2.48
EDEM3-206ENST00000474725 ZNF777Q9ULD5 760 aaPredicted RBP30.52■■■□□ 2.48
EDEM3-206ENST00000474725 PREX2Q70Z35 1606 aa30.51■■■□□ 2.47
EDEM3-206ENST00000474725 CAMSAP2Q08AD1 1489 aa30.49■■■□□ 2.47
EDEM3-206ENST00000474725 CDC42BPBQ9Y5S2 1711 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms