RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 RUSC2Q8N2Y8 1516 aa36.75■■■■□ 3.47
TRA2A-204ENST00000474586 CUL7Q14999 1698 aa36.7■■■■□ 3.47
TRA2A-204ENST00000474586 KIAA0586Q9BVV6 1533 aa36.61■■■■□ 3.45
TRA2A-204ENST00000474586 CARMIL1Q5VZK9 1371 aa36.61■■■■□ 3.45
TRA2A-204ENST00000474586 NPM1P06748 294 aaKnown RBP eCLIP36.35■■■■□ 3.41
TRA2A-204ENST00000474586 ADCY10Q96PN6 1610 aa36.33■■■■□ 3.41
TRA2A-204ENST00000474586 KIF13AQ9H1H9 1805 aa36.29■■■■□ 3.4
TRA2A-204ENST00000474586 IQGAP2Q13576 1575 aa36.28■■■■□ 3.4
TRA2A-204ENST00000474586 RAPGEF2Q9Y4G8 1499 aa36.27■■■■□ 3.4
TRA2A-204ENST00000474586 TTBK1Q5TCY1 1321 aaPredicted RBP36.27■■■■□ 3.4
TRA2A-204ENST00000474586 PTPRGP23470 1445 aa36.25■■■■□ 3.39
TRA2A-204ENST00000474586 CARMIL2Q6F5E8 1435 aa36.25■■■■□ 3.39
TRA2A-204ENST00000474586 MAPKBP1O60336 1514 aa36.2■■■■□ 3.39
TRA2A-204ENST00000474586 TNIKQ9UKE5 1360 aa36.2■■■■□ 3.39
TRA2A-204ENST00000474586 FAM69CQ0P6D2 419 aa36.19■■■■□ 3.38
TRA2A-204ENST00000474586 ABCC10Q5T3U5 1492 aa36.18■■■■□ 3.38
TRA2A-204ENST00000474586 DISP1Q96F81 1524 aa36.12■■■■□ 3.37
TRA2A-204ENST00000474586 DIP2BQ9P265 1576 aa36.08■■■■□ 3.37
TRA2A-204ENST00000474586 UGGT2Q9NYU1 1516 aa36.06■■■■□ 3.36
TRA2A-204ENST00000474586 ABCC2Q92887 1545 aa36■■■■□ 3.35
TRA2A-204ENST00000474586 UACAQ9BZF9 1416 aa35.98■■■■□ 3.35
TRA2A-204ENST00000474586 UHRF1BP1LA0JNW5 1464 aa35.96■■■■□ 3.35
TRA2A-204ENST00000474586 KIAA0556O60303 1618 aa35.95■■■■□ 3.35
TRA2A-204ENST00000474586 PRXQ9BXM0 1461 aa35.95■■■■□ 3.35
TRA2A-204ENST00000474586 CTTNBP2Q8WZ74 1663 aa35.94■■■■□ 3.34
TRA2A-204ENST00000474586 ASXL2Q76L83 1435 aa35.88■■■■□ 3.33
TRA2A-204ENST00000474586 TSPOAP1O95153 1857 aa35.86■■■■□ 3.33
TRA2A-204ENST00000474586 AEBP2Q6ZN18 517 aaPredicted RBP35.85■■■■□ 3.33
TRA2A-204ENST00000474586 PLB1Q6P1J6 1458 aa35.84■■■■□ 3.33
TRA2A-204ENST00000474586 KDM5BQ9UGL1 1544 aa35.8■■■■□ 3.32
TRA2A-204ENST00000474586 GOLGA3Q08378 1498 aa35.79■■■■□ 3.32
TRA2A-204ENST00000474586 CSRNP3Q8WYN3 585 aa35.78■■■■□ 3.32
TRA2A-204ENST00000474586 ZCCHC11Q5TAX3 1644 aaKnown RBP35.73■■■■□ 3.31
TRA2A-204ENST00000474586 GLI2P10070 1586 aa35.72■■■■□ 3.31
TRA2A-204ENST00000474586 KDM6BO15054 1643 aa35.72■■■■□ 3.31
TRA2A-204ENST00000474586 EPRSP07814 1512 aaKnown RBP35.66■■■■□ 3.3
TRA2A-204ENST00000474586 PPRC1Q5VV67 1664 aaKnown RBP35.62■■■■□ 3.29
TRA2A-204ENST00000474586 ABCA8O94911 1581 aa35.62■■■■□ 3.29
TRA2A-204ENST00000474586 P3H3Q8IVL6 736 aa35.6■■■■□ 3.29
TRA2A-204ENST00000474586 EEA1Q15075 1411 aa35.59■■■■□ 3.29
TRA2A-204ENST00000474586 FAM9AQ8IZU1 332 aaPredicted RBP35.56■■■■□ 3.28
TRA2A-204ENST00000474586 WDR7Q9Y4E6 1490 aa35.54■■■■□ 3.28
TRA2A-204ENST00000474586 MAP3K4Q9Y6R4 1608 aa35.54■■■■□ 3.28
TRA2A-204ENST00000474586 KCNH8Q96L42 1107 aa35.46■■■■□ 3.27
TRA2A-204ENST00000474586 SAMD9Q5K651 1589 aa35.45■■■■□ 3.27
TRA2A-204ENST00000474586 ARID3CA6NKF2 412 aa35.43■■■■□ 3.26
TRA2A-204ENST00000474586 RANGAP1P46060 587 aaPredicted RBP35.42■■■■□ 3.26
TRA2A-204ENST00000474586 TEX14Q8IWB6 1497 aa35.41■■■■□ 3.26
TRA2A-204ENST00000474586 COL17A1Q9UMD9 1497 aaPredicted RBP35.41■■■■□ 3.26
TRA2A-204ENST00000474586 ATP10BO94823 1461 aa35.35■■■■□ 3.25
TRA2A-204ENST00000474586 CD109Q6YHK3 1445 aa35.33■■■■□ 3.25
TRA2A-204ENST00000474586 CHIC1Q5VXU3 224 aa35.33■■■■□ 3.25
TRA2A-204ENST00000474586 KDM4FA0A1W2PPD8 638 aa35.32■■■■□ 3.24
TRA2A-204ENST00000474586 CFAP43Q8NDM7 1665 aa35.3■■■■□ 3.24
TRA2A-204ENST00000474586 KIF21BO75037 1637 aa35.3■■■■□ 3.24
TRA2A-204ENST00000474586 RAPGEF6Q8TEU7 1601 aa35.28■■■■□ 3.24
TRA2A-204ENST00000474586 MAGI3Q5TCQ9 1506 aa35.27■■■■□ 3.24
TRA2A-204ENST00000474586 FHOD3Q2V2M9 1422 aa35.26■■■■□ 3.24
TRA2A-204ENST00000474586 EHMT2Q96KQ7 1210 aa35.2■■■■□ 3.23
TRA2A-204ENST00000474586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.19■■■■□ 3.22
TRA2A-204ENST00000474586 HNRNPUL2Q1KMD3 747 aaKnown RBP35.19■■■■□ 3.22
TRA2A-204ENST00000474586 NUP153P49790 1475 aaKnown RBP35.16■■■■□ 3.22
TRA2A-204ENST00000474586 EFCAB5A4FU69 1503 aa35.12■■■■□ 3.21
TRA2A-204ENST00000474586 UBTFP17480 764 aaKnown RBP35.11■■■■□ 3.21
TRA2A-204ENST00000474586 ABCA9Q8IUA7 1624 aa35.08■■■■□ 3.21
TRA2A-204ENST00000474586 ADGRL1O94910 1474 aa35.06■■■■□ 3.2
TRA2A-204ENST00000474586 PLEKHD1A6NEE1 506 aa34.99■■■■□ 3.19
TRA2A-204ENST00000474586 ARAP3Q8WWN8 1544 aa34.99■■■■□ 3.19
TRA2A-204ENST00000474586 PHLDB1Q86UU1 1377 aa34.93■■■■□ 3.18
TRA2A-204ENST00000474586 NEO1Q92859 1461 aa34.89■■■■□ 3.18
TRA2A-204ENST00000474586 ARHGAP35Q9NRY4 1499 aa34.89■■■■□ 3.18
TRA2A-204ENST00000474586 CDK13Q14004 1512 aaKnown RBP34.86■■■■□ 3.17
TRA2A-204ENST00000474586 RAPGEF3O95398 923 aa34.85■■■■□ 3.17
TRA2A-204ENST00000474586 ATP1B4Q9UN42 357 aaPredicted RBP34.84■■■■□ 3.17
TRA2A-204ENST00000474586 FMN1Q68DA7 1419 aa34.82■■■■□ 3.17
TRA2A-204ENST00000474586 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.8■■■■□ 3.16
TRA2A-204ENST00000474586 TTC37Q6PGP7 1564 aa34.74■■■■□ 3.15
TRA2A-204ENST00000474586 HECW1Q76N89 1606 aa34.74■■■■□ 3.15
TRA2A-204ENST00000474586 FRMPD1Q5SYB0 1578 aa34.71■■■■□ 3.15
TRA2A-204ENST00000474586 AKNAQ7Z591 1439 aa34.71■■■■□ 3.15
TRA2A-204ENST00000474586 FANCAO15360 1455 aa34.7■■■■□ 3.15
TRA2A-204ENST00000474586 DENND4BO75064 1496 aaPredicted RBP34.66■■■■□ 3.14
TRA2A-204ENST00000474586 CFAP74Q9C0B2 1584 aa34.65■■■■□ 3.14
TRA2A-204ENST00000474586 CDK11AQ9UQ88 783 aaPredicted RBP34.64■■■■□ 3.14
TRA2A-204ENST00000474586 RICTORQ6R327 1708 aa34.6■■■■□ 3.13
TRA2A-204ENST00000474586 PLCH2O75038 1416 aa34.59■■■■□ 3.13
TRA2A-204ENST00000474586 LRRIQ1Q96JM4 1722 aa34.56■■■■□ 3.12
TRA2A-204ENST00000474586 TROQ12816 1431 aaPredicted RBP34.54■■■■□ 3.12
TRA2A-204ENST00000474586 ARID4BQ4LE39 1312 aaPredicted RBP34.54■■■■□ 3.12
TRA2A-204ENST00000474586 KIF14Q15058 1648 aa34.53■■■■□ 3.12
TRA2A-204ENST00000474586 ARHGEF40Q8TER5 1519 aa34.5■■■■□ 3.11
TRA2A-204ENST00000474586 ADAMTSL3P82987 1691 aa34.5■■■■□ 3.11
TRA2A-204ENST00000474586 CASKIN1Q8WXD9 1431 aa34.49■■■■□ 3.11
TRA2A-204ENST00000474586 SCAPERQ9BY12 1400 aa34.49■■■■□ 3.11
TRA2A-204ENST00000474586 MYO5CQ9NQX4 1742 aa34.49■■■■□ 3.11
TRA2A-204ENST00000474586 PCF11O94913 1555 aaKnown RBP34.49■■■■□ 3.11
TRA2A-204ENST00000474586 HECW2Q9P2P5 1572 aa34.49■■■■□ 3.11
TRA2A-204ENST00000474586 EFCAB2Q5VUJ9 269 aa34.48■■■■□ 3.11
TRA2A-204ENST00000474586 CLIP1P30622 1438 aa34.47■■■■□ 3.11
TRA2A-204ENST00000474586 ZMYM4Q5VZL5 1548 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms