RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 GOLGA3Q08378 1498 aa33.01■■■□□ 2.87
CDHR3-210ENST00000474330 EHMT2Q96KQ7 1210 aa33■■■□□ 2.87
CDHR3-210ENST00000474330 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
CDHR3-210ENST00000474330 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
CDHR3-210ENST00000474330 NUP160Q12769 1436 aa32.91■■■□□ 2.86
CDHR3-210ENST00000474330 CARMIL1Q5VZK9 1371 aa32.91■■■□□ 2.86
CDHR3-210ENST00000474330 ARAP1Q96P48 1450 aa32.87■■■□□ 2.85
CDHR3-210ENST00000474330 CYB5RLQ6IPT4 315 aa32.86■■■□□ 2.85
CDHR3-210ENST00000474330 TNIKQ9UKE5 1360 aa32.85■■■□□ 2.85
CDHR3-210ENST00000474330 UBTFP17480 764 aaKnown RBP32.84■■■□□ 2.85
CDHR3-210ENST00000474330 SHROOM2Q13796 1616 aa32.71■■■□□ 2.83
CDHR3-210ENST00000474330 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.83
CDHR3-210ENST00000474330 CEP162Q5TB80 1403 aa32.6■■■□□ 2.81
CDHR3-210ENST00000474330 JPH4Q96JJ6 628 aa32.6■■■□□ 2.81
CDHR3-210ENST00000474330 CTTNBP2Q8WZ74 1663 aa32.59■■■□□ 2.81
CDHR3-210ENST00000474330 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
CDHR3-210ENST00000474330 PRG4Q92954 1404 aaPredicted RBP32.52■■■□□ 2.8
CDHR3-210ENST00000474330 CLIP1P30622 1438 aa32.45■■■□□ 2.78
CDHR3-210ENST00000474330 IQGAP2Q13576 1575 aa32.39■■■□□ 2.78
CDHR3-210ENST00000474330 RANGAP1P46060 587 aaPredicted RBP32.33■■■□□ 2.77
CDHR3-210ENST00000474330 ARHGAP35Q9NRY4 1499 aa32.25■■■□□ 2.75
CDHR3-210ENST00000474330 UGGT2Q9NYU1 1516 aa32.21■■■□□ 2.75
CDHR3-210ENST00000474330 TRHP20396 242 aaPredicted RBP32.2■■■□□ 2.75
CDHR3-210ENST00000474330 EFCAB5A4FU69 1503 aa32.19■■■□□ 2.74
CDHR3-210ENST00000474330 DISP1Q96F81 1524 aa32.16■■■□□ 2.74
CDHR3-210ENST00000474330 SAMD9Q5K651 1589 aa32.15■■■□□ 2.74
CDHR3-210ENST00000474330 CARMIL2Q6F5E8 1435 aa32.14■■■□□ 2.74
CDHR3-210ENST00000474330 VPS8Q8N3P4 1428 aa32.12■■■□□ 2.73
CDHR3-210ENST00000474330 ADCY10Q96PN6 1610 aa32.1■■■□□ 2.73
CDHR3-210ENST00000474330 PTPRGP23470 1445 aa32.1■■■□□ 2.73
CDHR3-210ENST00000474330 KIAA0556O60303 1618 aa32.07■■■□□ 2.73
CDHR3-210ENST00000474330 TTBK1Q5TCY1 1321 aaPredicted RBP32.04■■■□□ 2.72
CDHR3-210ENST00000474330 P3H3Q8IVL6 736 aa32■■■□□ 2.71
CDHR3-210ENST00000474330 FHOD3Q2V2M9 1422 aa31.99■■■□□ 2.71
CDHR3-210ENST00000474330 NPM1P06748 294 aaKnown RBP eCLIP31.93■■■□□ 2.7
CDHR3-210ENST00000474330 MAPKBP1O60336 1514 aa31.89■■■□□ 2.7
CDHR3-210ENST00000474330 KIF13AQ9H1H9 1805 aa31.89■■■□□ 2.69
CDHR3-210ENST00000474330 FMN1Q68DA7 1419 aa31.89■■■□□ 2.69
CDHR3-210ENST00000474330 UACAQ9BZF9 1416 aa31.88■■■□□ 2.69
CDHR3-210ENST00000474330 UHRF1BP1LA0JNW5 1464 aa31.87■■■□□ 2.69
CDHR3-210ENST00000474330 ABCC2Q92887 1545 aa31.84■■■□□ 2.69
CDHR3-210ENST00000474330 PCF11O94913 1555 aaKnown RBP31.78■■■□□ 2.68
CDHR3-210ENST00000474330 ABCC10Q5T3U5 1492 aa31.78■■■□□ 2.68
CDHR3-210ENST00000474330 CASKIN1Q8WXD9 1431 aa31.77■■■□□ 2.68
CDHR3-210ENST00000474330 APLP2Q06481 763 aa31.77■■■□□ 2.68
CDHR3-210ENST00000474330 PLB1Q6P1J6 1458 aa31.75■■■□□ 2.67
CDHR3-210ENST00000474330 FYCO1Q9BQS8 1478 aa31.75■■■□□ 2.67
CDHR3-210ENST00000474330 KDM5BQ9UGL1 1544 aa31.74■■■□□ 2.67
CDHR3-210ENST00000474330 DIP2BQ9P265 1576 aa31.73■■■□□ 2.67
CDHR3-210ENST00000474330 FAM69CQ0P6D2 419 aa31.72■■■□□ 2.67
CDHR3-210ENST00000474330 ABCA8O94911 1581 aa31.71■■■□□ 2.67
CDHR3-210ENST00000474330 MAP3K1Q13233 1512 aa31.68■■■□□ 2.66
CDHR3-210ENST00000474330 ZCCHC11Q5TAX3 1644 aaKnown RBP31.68■■■□□ 2.66
CDHR3-210ENST00000474330 RAPGEF6Q8TEU7 1601 aa31.68■■■□□ 2.66
CDHR3-210ENST00000474330 PPARGC1BQ86YN6 1023 aaKnown RBP31.67■■■□□ 2.66
CDHR3-210ENST00000474330 ASXL2Q76L83 1435 aa31.67■■■□□ 2.66
CDHR3-210ENST00000474330 HECW1Q76N89 1606 aa31.63■■■□□ 2.65
CDHR3-210ENST00000474330 TIAM1Q13009 1591 aa31.62■■■□□ 2.65
CDHR3-210ENST00000474330 ATP1B4Q9UN42 357 aaPredicted RBP31.61■■■□□ 2.65
CDHR3-210ENST00000474330 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
CDHR3-210ENST00000474330 LRRIQ1Q96JM4 1722 aa31.57■■■□□ 2.64
CDHR3-210ENST00000474330 KANK4Q5T7N3 995 aaPredicted RBP31.53■■■□□ 2.64
CDHR3-210ENST00000474330 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
CDHR3-210ENST00000474330 TSPOAP1O95153 1857 aa31.52■■■□□ 2.64
CDHR3-210ENST00000474330 GLI2P10070 1586 aa31.52■■■□□ 2.64
CDHR3-210ENST00000474330 CCDC18Q5T9S5 1454 aa31.5■■■□□ 2.63
CDHR3-210ENST00000474330 TRIM26Q12899 539 aaPredicted RBP31.49■■■□□ 2.63
CDHR3-210ENST00000474330 EPRSP07814 1512 aaKnown RBP31.49■■■□□ 2.63
CDHR3-210ENST00000474330 ATP10BO94823 1461 aa31.47■■■□□ 2.63
CDHR3-210ENST00000474330 LRRC9Q6ZRR7 1453 aa31.47■■■□□ 2.63
CDHR3-210ENST00000474330 WDR7Q9Y4E6 1490 aa31.45■■■□□ 2.63
CDHR3-210ENST00000474330 ARID3CA6NKF2 412 aa31.44■■■□□ 2.62
CDHR3-210ENST00000474330 CDK13Q14004 1512 aaKnown RBP31.42■■■□□ 2.62
CDHR3-210ENST00000474330 PPRC1Q5VV67 1664 aaKnown RBP31.42■■■□□ 2.62
CDHR3-210ENST00000474330 MAP3K4Q9Y6R4 1608 aa31.39■■■□□ 2.62
CDHR3-210ENST00000474330 KCNH8Q96L42 1107 aa31.34■■■□□ 2.61
CDHR3-210ENST00000474330 PCGF6Q9BYE7 350 aa31.32■■■□□ 2.6
CDHR3-210ENST00000474330 MTUS2Q5JR59 1369 aa31.31■■■□□ 2.6
CDHR3-210ENST00000474330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.3■■■□□ 2.6
CDHR3-210ENST00000474330 HNRNPUL2Q1KMD3 747 aaKnown RBP31.3■■■□□ 2.6
CDHR3-210ENST00000474330 EHBP1L1Q8N3D4 1523 aa31.29■■■□□ 2.6
CDHR3-210ENST00000474330 MAGI3Q5TCQ9 1506 aa31.28■■■□□ 2.6
CDHR3-210ENST00000474330 KDM6BO15054 1643 aa31.25■■■□□ 2.59
CDHR3-210ENST00000474330 CDK11AQ9UQ88 783 aaPredicted RBP31.24■■■□□ 2.59
CDHR3-210ENST00000474330 SUPT6HQ7KZ85 1726 aaKnown RBP31.2■■■□□ 2.59
CDHR3-210ENST00000474330 CD109Q6YHK3 1445 aa31.2■■■□□ 2.58
CDHR3-210ENST00000474330 TEX14Q8IWB6 1497 aa31.16■■■□□ 2.58
CDHR3-210ENST00000474330 COL17A1Q9UMD9 1497 aaPredicted RBP31.15■■■□□ 2.58
CDHR3-210ENST00000474330 PLEKHD1A6NEE1 506 aa31.15■■■□□ 2.58
CDHR3-210ENST00000474330 TROQ12816 1431 aaPredicted RBP31.15■■■□□ 2.58
CDHR3-210ENST00000474330 ABCA9Q8IUA7 1624 aa31.14■■■□□ 2.58
CDHR3-210ENST00000474330 NCOA2Q15596 1464 aa31.14■■■□□ 2.58
CDHR3-210ENST00000474330 PHLDB1Q86UU1 1377 aa31.13■■■□□ 2.57
CDHR3-210ENST00000474330 RRBP1Q9P2E9 1410 aaKnown RBP31.11■■■□□ 2.57
CDHR3-210ENST00000474330 KIF14Q15058 1648 aa31.08■■■□□ 2.57
CDHR3-210ENST00000474330 CCNB3Q8WWL7 1395 aa31.02■■■□□ 2.56
CDHR3-210ENST00000474330 MYOM3Q5VTT5 1437 aa31■■■□□ 2.55
CDHR3-210ENST00000474330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.98■■■□□ 2.55
CDHR3-210ENST00000474330 FGD6Q6ZV73 1430 aa30.96■■■□□ 2.55
CDHR3-210ENST00000474330 TTC37Q6PGP7 1564 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms