RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 NUP160Q12769 1436 aa22.14■■□□□ 1.13
LDLRAP1-204ENST00000474283 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
LDLRAP1-204ENST00000474283 OSCARQ8IYS5 282 aa22.11■■□□□ 1.13
LDLRAP1-204ENST00000474283 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
LDLRAP1-204ENST00000474283 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
LDLRAP1-204ENST00000474283 KIAA0586Q9BVV6 1533 aa22.06■■□□□ 1.12
LDLRAP1-204ENST00000474283 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
LDLRAP1-204ENST00000474283 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
LDLRAP1-204ENST00000474283 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
LDLRAP1-204ENST00000474283 UGGT2Q9NYU1 1516 aa21.92■■□□□ 1.1
LDLRAP1-204ENST00000474283 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
LDLRAP1-204ENST00000474283 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
LDLRAP1-204ENST00000474283 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
LDLRAP1-204ENST00000474283 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
LDLRAP1-204ENST00000474283 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
LDLRAP1-204ENST00000474283 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
LDLRAP1-204ENST00000474283 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
LDLRAP1-204ENST00000474283 DISP1Q96F81 1524 aa21.84■■□□□ 1.09
LDLRAP1-204ENST00000474283 CARMIL2Q6F5E8 1435 aa21.83■■□□□ 1.09
LDLRAP1-204ENST00000474283 CLIP1P30622 1438 aa21.82■■□□□ 1.08
LDLRAP1-204ENST00000474283 RIMBP3CA6NJZ7 1639 aa21.82■■□□□ 1.08
LDLRAP1-204ENST00000474283 RIMBP3BA6NNM3 1639 aa21.82■■□□□ 1.08
LDLRAP1-204ENST00000474283 RIMBP3Q9UFD9 1639 aa21.82■■□□□ 1.08
LDLRAP1-204ENST00000474283 P3H3Q8IVL6 736 aa21.81■■□□□ 1.08
LDLRAP1-204ENST00000474283 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
LDLRAP1-204ENST00000474283 ARHGAP35Q9NRY4 1499 aa21.79■■□□□ 1.08
LDLRAP1-204ENST00000474283 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
LDLRAP1-204ENST00000474283 FHOD3Q2V2M9 1422 aa21.75■■□□□ 1.07
LDLRAP1-204ENST00000474283 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
LDLRAP1-204ENST00000474283 PTPRGP23470 1445 aa21.66■■□□□ 1.06
LDLRAP1-204ENST00000474283 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
LDLRAP1-204ENST00000474283 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
LDLRAP1-204ENST00000474283 PCF11O94913 1555 aaKnown RBP21.58■■□□□ 1.05
LDLRAP1-204ENST00000474283 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
LDLRAP1-204ENST00000474283 PLB1Q6P1J6 1458 aa21.57■■□□□ 1.04
LDLRAP1-204ENST00000474283 ABCA8O94911 1581 aa21.57■■□□□ 1.04
LDLRAP1-204ENST00000474283 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
LDLRAP1-204ENST00000474283 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
LDLRAP1-204ENST00000474283 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
LDLRAP1-204ENST00000474283 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
LDLRAP1-204ENST00000474283 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
LDLRAP1-204ENST00000474283 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
LDLRAP1-204ENST00000474283 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
LDLRAP1-204ENST00000474283 FYCO1Q9BQS8 1478 aa21.5■■□□□ 1.03
LDLRAP1-204ENST00000474283 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
LDLRAP1-204ENST00000474283 UHRF1BP1LA0JNW5 1464 aa21.46■■□□□ 1.03
LDLRAP1-204ENST00000474283 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
LDLRAP1-204ENST00000474283 ZCCHC11Q5TAX3 1644 aaKnown RBP21.46■■□□□ 1.03
LDLRAP1-204ENST00000474283 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.02
LDLRAP1-204ENST00000474283 CFAP43Q8NDM7 1665 aa21.41■■□□□ 1.02
LDLRAP1-204ENST00000474283 CDK13Q14004 1512 aaKnown RBP21.41■■□□□ 1.02
LDLRAP1-204ENST00000474283 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.02
LDLRAP1-204ENST00000474283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
LDLRAP1-204ENST00000474283 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
LDLRAP1-204ENST00000474283 CCDC18Q5T9S5 1454 aa21.38■■□□□ 1.01
LDLRAP1-204ENST00000474283 NPM1P06748 294 aaKnown RBP eCLIP21.37■■□□□ 1.01
LDLRAP1-204ENST00000474283 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
LDLRAP1-204ENST00000474283 ATP10BO94823 1461 aa21.37■■□□□ 1.01
LDLRAP1-204ENST00000474283 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
LDLRAP1-204ENST00000474283 APLP2Q06481 763 aa21.34■■□□□ 1.01
LDLRAP1-204ENST00000474283 MAP3K1Q13233 1512 aa21.27■■□□□ 1
LDLRAP1-204ENST00000474283 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
LDLRAP1-204ENST00000474283 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
LDLRAP1-204ENST00000474283 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
LDLRAP1-204ENST00000474283 CDK11AQ9UQ88 783 aaPredicted RBP21.24■□□□□ 0.99
LDLRAP1-204ENST00000474283 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
LDLRAP1-204ENST00000474283 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
LDLRAP1-204ENST00000474283 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
LDLRAP1-204ENST00000474283 EHBP1L1Q8N3D4 1523 aa21.21■□□□□ 0.99
LDLRAP1-204ENST00000474283 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
LDLRAP1-204ENST00000474283 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
LDLRAP1-204ENST00000474283 LRRC9Q6ZRR7 1453 aa21.2■□□□□ 0.98
LDLRAP1-204ENST00000474283 KIF14Q15058 1648 aa21.19■□□□□ 0.98
LDLRAP1-204ENST00000474283 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
LDLRAP1-204ENST00000474283 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
LDLRAP1-204ENST00000474283 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
LDLRAP1-204ENST00000474283 KANK4Q5T7N3 995 aaPredicted RBP21.17■□□□□ 0.98
LDLRAP1-204ENST00000474283 KCNH8Q96L42 1107 aa21.17■□□□□ 0.98
LDLRAP1-204ENST00000474283 TSPOAP1O95153 1857 aa21.12■□□□□ 0.97
LDLRAP1-204ENST00000474283 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
LDLRAP1-204ENST00000474283 MYO5CQ9NQX4 1742 aa21.11■□□□□ 0.97
LDLRAP1-204ENST00000474283 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
LDLRAP1-204ENST00000474283 TRIM26Q12899 539 aaPredicted RBP21.1■□□□□ 0.97
LDLRAP1-204ENST00000474283 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
LDLRAP1-204ENST00000474283 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.09■□□□□ 0.97
LDLRAP1-204ENST00000474283 ABCA9Q8IUA7 1624 aa21.08■□□□□ 0.97
LDLRAP1-204ENST00000474283 ABCC10Q5T3U5 1492 aa21.07■□□□□ 0.96
LDLRAP1-204ENST00000474283 ITSN2Q9NZM3 1697 aa21.06■□□□□ 0.96
LDLRAP1-204ENST00000474283 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
LDLRAP1-204ENST00000474283 GLI2P10070 1586 aa21.05■□□□□ 0.96
LDLRAP1-204ENST00000474283 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
LDLRAP1-204ENST00000474283 CDC42BPBQ9Y5S2 1711 aa21.04■□□□□ 0.96
LDLRAP1-204ENST00000474283 FAM69CQ0P6D2 419 aa21.03■□□□□ 0.96
LDLRAP1-204ENST00000474283 PREX2Q70Z35 1606 aa21.02■□□□□ 0.96
LDLRAP1-204ENST00000474283 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
LDLRAP1-204ENST00000474283 CD109Q6YHK3 1445 aa20.96■□□□□ 0.95
LDLRAP1-204ENST00000474283 PPRC1Q5VV67 1664 aaKnown RBP20.96■□□□□ 0.95
LDLRAP1-204ENST00000474283 ARHGAP5Q13017 1502 aa20.94■□□□□ 0.94
LDLRAP1-204ENST00000474283 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
LDLRAP1-204ENST00000474283 PHLDB1Q86UU1 1377 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms