RNA–Protein interactions for RNA: ENST00000474106.5

SVIL-208, Transcript of supervillin, humanhuman

TSL 4

Gene SVIL, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-208ENST00000474106 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
SVIL-208ENST00000474106 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
SVIL-208ENST00000474106 CHD1O14646 1710 aa19.01■□□□□ 0.63
SVIL-208ENST00000474106 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
SVIL-208ENST00000474106 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
SVIL-208ENST00000474106 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
SVIL-208ENST00000474106 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
SVIL-208ENST00000474106 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
SVIL-208ENST00000474106 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
SVIL-208ENST00000474106 NUP160Q12769 1436 aa18.88■□□□□ 0.61
SVIL-208ENST00000474106 FHOD3Q2V2M9 1422 aa18.86■□□□□ 0.61
SVIL-208ENST00000474106 EFCAB5A4FU69 1503 aa18.85■□□□□ 0.61
SVIL-208ENST00000474106 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
SVIL-208ENST00000474106 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
SVIL-208ENST00000474106 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
SVIL-208ENST00000474106 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
SVIL-208ENST00000474106 UGGT2Q9NYU1 1516 aa18.8■□□□□ 0.6
SVIL-208ENST00000474106 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
SVIL-208ENST00000474106 JPH4Q96JJ6 628 aa18.77■□□□□ 0.6
SVIL-208ENST00000474106 KIAA0556O60303 1618 aa18.75■□□□□ 0.59
SVIL-208ENST00000474106 APLP2Q06481 763 aa18.74■□□□□ 0.59
SVIL-208ENST00000474106 DISP1Q96F81 1524 aa18.74■□□□□ 0.59
SVIL-208ENST00000474106 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
SVIL-208ENST00000474106 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
SVIL-208ENST00000474106 CARMIL2Q6F5E8 1435 aa18.7■□□□□ 0.58
SVIL-208ENST00000474106 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
SVIL-208ENST00000474106 FMN1Q68DA7 1419 aa18.69■□□□□ 0.58
SVIL-208ENST00000474106 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
SVIL-208ENST00000474106 SHROOM2Q13796 1616 aa18.66■□□□□ 0.58
SVIL-208ENST00000474106 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
SVIL-208ENST00000474106 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
SVIL-208ENST00000474106 FYCO1Q9BQS8 1478 aa18.61■□□□□ 0.57
SVIL-208ENST00000474106 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
SVIL-208ENST00000474106 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
SVIL-208ENST00000474106 TIAM1Q13009 1591 aa18.56■□□□□ 0.56
SVIL-208ENST00000474106 LRRIQ1Q96JM4 1722 aa18.56■□□□□ 0.56
SVIL-208ENST00000474106 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
SVIL-208ENST00000474106 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
SVIL-208ENST00000474106 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
SVIL-208ENST00000474106 PTPRGP23470 1445 aa18.55■□□□□ 0.56
SVIL-208ENST00000474106 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
SVIL-208ENST00000474106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
SVIL-208ENST00000474106 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
SVIL-208ENST00000474106 CDK13Q14004 1512 aaKnown RBP18.49■□□□□ 0.55
SVIL-208ENST00000474106 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
SVIL-208ENST00000474106 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
SVIL-208ENST00000474106 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
SVIL-208ENST00000474106 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
SVIL-208ENST00000474106 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
SVIL-208ENST00000474106 ABCA8O94911 1581 aa18.47■□□□□ 0.55
SVIL-208ENST00000474106 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.55
SVIL-208ENST00000474106 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
SVIL-208ENST00000474106 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
SVIL-208ENST00000474106 UACAQ9BZF9 1416 aa18.41■□□□□ 0.54
SVIL-208ENST00000474106 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
SVIL-208ENST00000474106 EHBP1L1Q8N3D4 1523 aa18.37■□□□□ 0.53
SVIL-208ENST00000474106 ABCC2Q92887 1545 aa18.37■□□□□ 0.53
SVIL-208ENST00000474106 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
SVIL-208ENST00000474106 ATP10BO94823 1461 aa18.35■□□□□ 0.53
SVIL-208ENST00000474106 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
SVIL-208ENST00000474106 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
SVIL-208ENST00000474106 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
SVIL-208ENST00000474106 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
SVIL-208ENST00000474106 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
SVIL-208ENST00000474106 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
SVIL-208ENST00000474106 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
SVIL-208ENST00000474106 ZCCHC11Q5TAX3 1644 aaKnown RBP18.3■□□□□ 0.52
SVIL-208ENST00000474106 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
SVIL-208ENST00000474106 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
SVIL-208ENST00000474106 PHLDB1Q86UU1 1377 aa18.29■□□□□ 0.52
SVIL-208ENST00000474106 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
SVIL-208ENST00000474106 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
SVIL-208ENST00000474106 KIF14Q15058 1648 aa18.24■□□□□ 0.51
SVIL-208ENST00000474106 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
SVIL-208ENST00000474106 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
SVIL-208ENST00000474106 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
SVIL-208ENST00000474106 ITGAEP38570 1179 aa18.21■□□□□ 0.51
SVIL-208ENST00000474106 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
SVIL-208ENST00000474106 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
SVIL-208ENST00000474106 RRBP1Q9P2E9 1410 aaKnown RBP18.2■□□□□ 0.5
SVIL-208ENST00000474106 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
SVIL-208ENST00000474106 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
SVIL-208ENST00000474106 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
SVIL-208ENST00000474106 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
SVIL-208ENST00000474106 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
SVIL-208ENST00000474106 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
SVIL-208ENST00000474106 WDR7Q9Y4E6 1490 aa18.11■□□□□ 0.49
SVIL-208ENST00000474106 CDC42BPAQ5VT25 1732 aa18.1■□□□□ 0.49
SVIL-208ENST00000474106 ABCC10Q5T3U5 1492 aa18.1■□□□□ 0.49
SVIL-208ENST00000474106 TTC37Q6PGP7 1564 aa18.09■□□□□ 0.49
SVIL-208ENST00000474106 GPATCH8Q9UKJ3 1502 aaKnown RBP18.09■□□□□ 0.49
SVIL-208ENST00000474106 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
SVIL-208ENST00000474106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.08■□□□□ 0.49
SVIL-208ENST00000474106 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
SVIL-208ENST00000474106 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
SVIL-208ENST00000474106 MYO5CQ9NQX4 1742 aa18.05■□□□□ 0.48
SVIL-208ENST00000474106 TCOF1Q13428 1488 aaKnown RBP18.03■□□□□ 0.48
SVIL-208ENST00000474106 PREX2Q70Z35 1606 aa18.03■□□□□ 0.48
SVIL-208ENST00000474106 CDC42BPBQ9Y5S2 1711 aa18.03■□□□□ 0.48
SVIL-208ENST00000474106 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms