RNA–Protein interactions for RNA: ENST00000474100.1

PSMB4-203, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-203ENST00000474100 CUX1P39880 1505 aa13.19□□□□□ -0.3
PSMB4-203ENST00000474100 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
PSMB4-203ENST00000474100 PBRM1Q86U86 1689 aa13.14□□□□□ -0.31
PSMB4-203ENST00000474100 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
PSMB4-203ENST00000474100 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
PSMB4-203ENST00000474100 CEP170Q5SW79 1584 aa13.08□□□□□ -0.32
PSMB4-203ENST00000474100 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
PSMB4-203ENST00000474100 NUP160Q12769 1436 aa13.05□□□□□ -0.32
PSMB4-203ENST00000474100 FAM69CQ0P6D2 419 aa13.05□□□□□ -0.32
PSMB4-203ENST00000474100 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
PSMB4-203ENST00000474100 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
PSMB4-203ENST00000474100 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
PSMB4-203ENST00000474100 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
PSMB4-203ENST00000474100 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
PSMB4-203ENST00000474100 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
PSMB4-203ENST00000474100 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
PSMB4-203ENST00000474100 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
PSMB4-203ENST00000474100 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
PSMB4-203ENST00000474100 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
PSMB4-203ENST00000474100 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
PSMB4-203ENST00000474100 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
PSMB4-203ENST00000474100 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
PSMB4-203ENST00000474100 KDM6BO15054 1643 aa12.91□□□□□ -0.34
PSMB4-203ENST00000474100 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
PSMB4-203ENST00000474100 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
PSMB4-203ENST00000474100 DIP2BQ9P265 1576 aa12.9□□□□□ -0.35
PSMB4-203ENST00000474100 TOP2BQ02880 1626 aa12.86□□□□□ -0.35
PSMB4-203ENST00000474100 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
PSMB4-203ENST00000474100 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
PSMB4-203ENST00000474100 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
PSMB4-203ENST00000474100 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
PSMB4-203ENST00000474100 RUSC2Q8N2Y8 1516 aa12.83□□□□□ -0.35
PSMB4-203ENST00000474100 TSPOAP1O95153 1857 aa12.82□□□□□ -0.36
PSMB4-203ENST00000474100 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
PSMB4-203ENST00000474100 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
PSMB4-203ENST00000474100 DSG3P32926 999 aa12.78□□□□□ -0.36
PSMB4-203ENST00000474100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
PSMB4-203ENST00000474100 PTPRGP23470 1445 aa12.77□□□□□ -0.37
PSMB4-203ENST00000474100 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
PSMB4-203ENST00000474100 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
PSMB4-203ENST00000474100 ASXL2Q76L83 1435 aa12.72□□□□□ -0.37
PSMB4-203ENST00000474100 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
PSMB4-203ENST00000474100 HECW2Q9P2P5 1572 aa12.71□□□□□ -0.37
PSMB4-203ENST00000474100 ABCC2Q92887 1545 aa12.71□□□□□ -0.38
PSMB4-203ENST00000474100 CARMIL2Q6F5E8 1435 aa12.7□□□□□ -0.38
PSMB4-203ENST00000474100 IGF1RP08069 1367 aa12.69□□□□□ -0.38
PSMB4-203ENST00000474100 GLI2P10070 1586 aa12.68□□□□□ -0.38
PSMB4-203ENST00000474100 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
PSMB4-203ENST00000474100 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
PSMB4-203ENST00000474100 PPRC1Q5VV67 1664 aaKnown RBP12.65□□□□□ -0.38
PSMB4-203ENST00000474100 TEX14Q8IWB6 1497 aa12.65□□□□□ -0.38
PSMB4-203ENST00000474100 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
PSMB4-203ENST00000474100 CUL7Q14999 1698 aa12.64□□□□□ -0.39
PSMB4-203ENST00000474100 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
PSMB4-203ENST00000474100 EPRSP07814 1512 aaKnown RBP12.62□□□□□ -0.39
PSMB4-203ENST00000474100 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
PSMB4-203ENST00000474100 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
PSMB4-203ENST00000474100 FBXO41Q8TF61 875 aa12.61□□□□□ -0.39
PSMB4-203ENST00000474100 CAPN15O75808 1086 aa12.58□□□□□ -0.4
PSMB4-203ENST00000474100 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
PSMB4-203ENST00000474100 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
PSMB4-203ENST00000474100 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
PSMB4-203ENST00000474100 DISP1Q96F81 1524 aa12.55□□□□□ -0.4
PSMB4-203ENST00000474100 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
PSMB4-203ENST00000474100 ZCCHC11Q5TAX3 1644 aaKnown RBP12.53□□□□□ -0.4
PSMB4-203ENST00000474100 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
PSMB4-203ENST00000474100 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
PSMB4-203ENST00000474100 CD109Q6YHK3 1445 aa12.52□□□□□ -0.41
PSMB4-203ENST00000474100 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
PSMB4-203ENST00000474100 UGGT2Q9NYU1 1516 aa12.47□□□□□ -0.41
PSMB4-203ENST00000474100 KIAA0556O60303 1618 aa12.46□□□□□ -0.41
PSMB4-203ENST00000474100 KIF21BO75037 1637 aa12.45□□□□□ -0.42
PSMB4-203ENST00000474100 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
PSMB4-203ENST00000474100 CFAP43Q8NDM7 1665 aa12.43□□□□□ -0.42
PSMB4-203ENST00000474100 PTPRMP28827 1452 aa12.43□□□□□ -0.42
PSMB4-203ENST00000474100 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
PSMB4-203ENST00000474100 ARID4BQ4LE39 1312 aaPredicted RBP12.42□□□□□ -0.42
PSMB4-203ENST00000474100 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
PSMB4-203ENST00000474100 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
PSMB4-203ENST00000474100 LMTK3Q96Q04 1460 aa12.4□□□□□ -0.43
PSMB4-203ENST00000474100 GOLGA3Q08378 1498 aa12.39□□□□□ -0.43
PSMB4-203ENST00000474100 ARAP3Q8WWN8 1544 aa12.38□□□□□ -0.43
PSMB4-203ENST00000474100 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
PSMB4-203ENST00000474100 RAPGEF3O95398 923 aa12.37□□□□□ -0.43
PSMB4-203ENST00000474100 ABCA8O94911 1581 aa12.37□□□□□ -0.43
PSMB4-203ENST00000474100 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
PSMB4-203ENST00000474100 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
PSMB4-203ENST00000474100 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
PSMB4-203ENST00000474100 HSPA2P54652 639 aa12.33□□□□□ -0.44
PSMB4-203ENST00000474100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
PSMB4-203ENST00000474100 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
PSMB4-203ENST00000474100 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
PSMB4-203ENST00000474100 MADDQ8WXG6 1647 aa12.31□□□□□ -0.44
PSMB4-203ENST00000474100 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
PSMB4-203ENST00000474100 ATP10BO94823 1461 aa12.29□□□□□ -0.44
PSMB4-203ENST00000474100 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
PSMB4-203ENST00000474100 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
PSMB4-203ENST00000474100 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
PSMB4-203ENST00000474100 NEO1Q92859 1461 aa12.28□□□□□ -0.44
PSMB4-203ENST00000474100 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms