RNA–Protein interactions for RNA: ENST00000473798.1

LINC00115-201, long intergenic non-protein coding RNA 115, humanhuman

BASIC

Gene LINC00115, Length 1,317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00115-201ENST00000473798 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
LINC00115-201ENST00000473798 RANGAP1P46060 587 aaPredicted RBP23.05■■□□□ 1.28
LINC00115-201ENST00000473798 CHD1O14646 1710 aa23.01■■□□□ 1.27
LINC00115-201ENST00000473798 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
LINC00115-201ENST00000473798 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
LINC00115-201ENST00000473798 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
LINC00115-201ENST00000473798 NUP160Q12769 1436 aa22.92■■□□□ 1.26
LINC00115-201ENST00000473798 KIAA0586Q9BVV6 1533 aa22.88■■□□□ 1.25
LINC00115-201ENST00000473798 CLIP1P30622 1438 aa22.88■■□□□ 1.25
LINC00115-201ENST00000473798 IQGAP2Q13576 1575 aa22.86■■□□□ 1.25
LINC00115-201ENST00000473798 FOXD1Q16676 465 aa22.85■■□□□ 1.25
LINC00115-201ENST00000473798 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
LINC00115-201ENST00000473798 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
LINC00115-201ENST00000473798 ARHGAP35Q9NRY4 1499 aa22.77■■□□□ 1.24
LINC00115-201ENST00000473798 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
LINC00115-201ENST00000473798 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
LINC00115-201ENST00000473798 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
LINC00115-201ENST00000473798 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
LINC00115-201ENST00000473798 FHOD3Q2V2M9 1422 aa22.7■■□□□ 1.23
LINC00115-201ENST00000473798 EFCAB5A4FU69 1503 aa22.7■■□□□ 1.22
LINC00115-201ENST00000473798 SAMD9Q5K651 1589 aa22.68■■□□□ 1.22
LINC00115-201ENST00000473798 DISP1Q96F81 1524 aa22.68■■□□□ 1.22
LINC00115-201ENST00000473798 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
LINC00115-201ENST00000473798 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
LINC00115-201ENST00000473798 SHROOM2Q13796 1616 aa22.64■■□□□ 1.21
LINC00115-201ENST00000473798 KIAA0556O60303 1618 aa22.63■■□□□ 1.21
LINC00115-201ENST00000473798 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
LINC00115-201ENST00000473798 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
LINC00115-201ENST00000473798 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
LINC00115-201ENST00000473798 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
LINC00115-201ENST00000473798 ATP1B4Q9UN42 357 aaPredicted RBP22.5■■□□□ 1.19
LINC00115-201ENST00000473798 PTPRGP23470 1445 aa22.47■■□□□ 1.19
LINC00115-201ENST00000473798 PCF11O94913 1555 aaKnown RBP22.47■■□□□ 1.19
LINC00115-201ENST00000473798 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
LINC00115-201ENST00000473798 POTEDQ86YR6 584 aa22.42■■□□□ 1.18
LINC00115-201ENST00000473798 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
LINC00115-201ENST00000473798 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
LINC00115-201ENST00000473798 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
LINC00115-201ENST00000473798 FYCO1Q9BQS8 1478 aa22.4■■□□□ 1.18
LINC00115-201ENST00000473798 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
LINC00115-201ENST00000473798 APLP2Q06481 763 aa22.37■■□□□ 1.17
LINC00115-201ENST00000473798 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
LINC00115-201ENST00000473798 ABCA8O94911 1581 aa22.34■■□□□ 1.17
LINC00115-201ENST00000473798 HECW1Q76N89 1606 aa22.33■■□□□ 1.16
LINC00115-201ENST00000473798 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
LINC00115-201ENST00000473798 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
LINC00115-201ENST00000473798 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
LINC00115-201ENST00000473798 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
LINC00115-201ENST00000473798 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
LINC00115-201ENST00000473798 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
LINC00115-201ENST00000473798 LRRIQ1Q96JM4 1722 aa22.28■■□□□ 1.16
LINC00115-201ENST00000473798 EPRSP07814 1512 aaKnown RBP22.27■■□□□ 1.16
LINC00115-201ENST00000473798 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
LINC00115-201ENST00000473798 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
LINC00115-201ENST00000473798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
LINC00115-201ENST00000473798 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
LINC00115-201ENST00000473798 ABCC2Q92887 1545 aa22.24■■□□□ 1.15
LINC00115-201ENST00000473798 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
LINC00115-201ENST00000473798 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
LINC00115-201ENST00000473798 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
LINC00115-201ENST00000473798 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
LINC00115-201ENST00000473798 UHRF1BP1LA0JNW5 1464 aa22.2■■□□□ 1.14
LINC00115-201ENST00000473798 ATP10BO94823 1461 aa22.2■■□□□ 1.14
LINC00115-201ENST00000473798 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.14
LINC00115-201ENST00000473798 LRRC9Q6ZRR7 1453 aa22.17■■□□□ 1.14
LINC00115-201ENST00000473798 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
LINC00115-201ENST00000473798 MAGI3Q5TCQ9 1506 aa22.14■■□□□ 1.13
LINC00115-201ENST00000473798 KDM5BQ9UGL1 1544 aa22.11■■□□□ 1.13
LINC00115-201ENST00000473798 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
LINC00115-201ENST00000473798 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
LINC00115-201ENST00000473798 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
LINC00115-201ENST00000473798 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.13
LINC00115-201ENST00000473798 EHBP1L1Q8N3D4 1523 aa22.07■■□□□ 1.12
LINC00115-201ENST00000473798 NPM1P06748 294 aaKnown RBP eCLIP22.06■■□□□ 1.12
LINC00115-201ENST00000473798 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
LINC00115-201ENST00000473798 KCNH8Q96L42 1107 aa22■■□□□ 1.11
LINC00115-201ENST00000473798 NCOA2Q15596 1464 aa21.99■■□□□ 1.11
LINC00115-201ENST00000473798 SUPT6HQ7KZ85 1726 aaKnown RBP21.98■■□□□ 1.11
LINC00115-201ENST00000473798 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
LINC00115-201ENST00000473798 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
LINC00115-201ENST00000473798 KIF14Q15058 1648 aa21.97■■□□□ 1.11
LINC00115-201ENST00000473798 WDR7Q9Y4E6 1490 aa21.94■■□□□ 1.1
LINC00115-201ENST00000473798 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
LINC00115-201ENST00000473798 CCNB3Q8WWL7 1395 aa21.9■■□□□ 1.1
LINC00115-201ENST00000473798 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
LINC00115-201ENST00000473798 MYOM3Q5VTT5 1437 aa21.87■■□□□ 1.09
LINC00115-201ENST00000473798 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
LINC00115-201ENST00000473798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
LINC00115-201ENST00000473798 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
LINC00115-201ENST00000473798 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
LINC00115-201ENST00000473798 GPATCH8Q9UKJ3 1502 aaKnown RBP21.83■■□□□ 1.08
LINC00115-201ENST00000473798 FGD6Q6ZV73 1430 aa21.83■■□□□ 1.08
LINC00115-201ENST00000473798 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
LINC00115-201ENST00000473798 RRBP1Q9P2E9 1410 aaKnown RBP21.81■■□□□ 1.08
LINC00115-201ENST00000473798 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
LINC00115-201ENST00000473798 MSH5O43196 834 aa21.78■■□□□ 1.08
LINC00115-201ENST00000473798 ZNF777Q9ULD5 760 aaPredicted RBP21.78■■□□□ 1.08
LINC00115-201ENST00000473798 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.08
LINC00115-201ENST00000473798 ZNF644Q9H582 1327 aaPredicted RBP21.76■■□□□ 1.07
LINC00115-201ENST00000473798 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms