RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
BRD3-205ENST00000473349 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
BRD3-205ENST00000473349 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
BRD3-205ENST00000473349 NUP160Q12769 1436 aa16.79■□□□□ 0.28
BRD3-205ENST00000473349 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
BRD3-205ENST00000473349 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
BRD3-205ENST00000473349 PRG4Q92954 1404 aaPredicted RBP16.67■□□□□ 0.26
BRD3-205ENST00000473349 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
BRD3-205ENST00000473349 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
BRD3-205ENST00000473349 IGF1RP08069 1367 aa16.62■□□□□ 0.25
BRD3-205ENST00000473349 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
BRD3-205ENST00000473349 KIAA0586Q9BVV6 1533 aa16.51■□□□□ 0.23
BRD3-205ENST00000473349 CUL7Q14999 1698 aa16.51■□□□□ 0.23
BRD3-205ENST00000473349 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
BRD3-205ENST00000473349 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
BRD3-205ENST00000473349 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
BRD3-205ENST00000473349 ADCY10Q96PN6 1610 aa16.48■□□□□ 0.23
BRD3-205ENST00000473349 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
BRD3-205ENST00000473349 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
BRD3-205ENST00000473349 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
BRD3-205ENST00000473349 ABCC10Q5T3U5 1492 aa16.41■□□□□ 0.22
BRD3-205ENST00000473349 PTPRGP23470 1445 aa16.39■□□□□ 0.21
BRD3-205ENST00000473349 MAPKBP1O60336 1514 aa16.39■□□□□ 0.21
BRD3-205ENST00000473349 DIP2BQ9P265 1576 aa16.38■□□□□ 0.21
BRD3-205ENST00000473349 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
BRD3-205ENST00000473349 TNIKQ9UKE5 1360 aa16.34■□□□□ 0.21
BRD3-205ENST00000473349 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
BRD3-205ENST00000473349 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
BRD3-205ENST00000473349 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
BRD3-205ENST00000473349 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
BRD3-205ENST00000473349 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
BRD3-205ENST00000473349 ASXL2Q76L83 1435 aa16.27■□□□□ 0.19
BRD3-205ENST00000473349 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
BRD3-205ENST00000473349 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
BRD3-205ENST00000473349 KDM6BO15054 1643 aa16.23■□□□□ 0.19
BRD3-205ENST00000473349 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
BRD3-205ENST00000473349 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
BRD3-205ENST00000473349 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
BRD3-205ENST00000473349 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
BRD3-205ENST00000473349 CTTNBP2Q8WZ74 1663 aa16.18■□□□□ 0.18
BRD3-205ENST00000473349 ZCCHC11Q5TAX3 1644 aaKnown RBP16.18■□□□□ 0.18
BRD3-205ENST00000473349 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
BRD3-205ENST00000473349 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
BRD3-205ENST00000473349 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
BRD3-205ENST00000473349 GLI2P10070 1586 aa16.15■□□□□ 0.18
BRD3-205ENST00000473349 KDM4FA0A1W2PPD8 638 aa16.14■□□□□ 0.17
BRD3-205ENST00000473349 COL17A1Q9UMD9 1497 aaPredicted RBP16.13■□□□□ 0.17
BRD3-205ENST00000473349 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
BRD3-205ENST00000473349 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
BRD3-205ENST00000473349 MAP3K4Q9Y6R4 1608 aa16.1■□□□□ 0.17
BRD3-205ENST00000473349 ABCA8O94911 1581 aa16.09■□□□□ 0.17
BRD3-205ENST00000473349 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
BRD3-205ENST00000473349 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
BRD3-205ENST00000473349 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
BRD3-205ENST00000473349 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
BRD3-205ENST00000473349 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
BRD3-205ENST00000473349 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
BRD3-205ENST00000473349 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
BRD3-205ENST00000473349 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
BRD3-205ENST00000473349 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
BRD3-205ENST00000473349 ATP10BO94823 1461 aa15.97■□□□□ 0.15
BRD3-205ENST00000473349 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
BRD3-205ENST00000473349 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
BRD3-205ENST00000473349 CFAP43Q8NDM7 1665 aa15.94■□□□□ 0.14
BRD3-205ENST00000473349 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
BRD3-205ENST00000473349 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
BRD3-205ENST00000473349 RAPGEF6Q8TEU7 1601 aa15.91■□□□□ 0.14
BRD3-205ENST00000473349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
BRD3-205ENST00000473349 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
BRD3-205ENST00000473349 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
BRD3-205ENST00000473349 EEA1Q15075 1411 aa15.88■□□□□ 0.13
BRD3-205ENST00000473349 NUP153P49790 1475 aaKnown RBP15.88■□□□□ 0.13
BRD3-205ENST00000473349 ABCA9Q8IUA7 1624 aa15.85■□□□□ 0.13
BRD3-205ENST00000473349 KIF21BO75037 1637 aa15.83■□□□□ 0.13
BRD3-205ENST00000473349 RAPGEF3O95398 923 aa15.83■□□□□ 0.12
BRD3-205ENST00000473349 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
BRD3-205ENST00000473349 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
BRD3-205ENST00000473349 CDK13Q14004 1512 aaKnown RBP15.78■□□□□ 0.12
BRD3-205ENST00000473349 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.12
BRD3-205ENST00000473349 DMRT2Q9Y5R5 561 aa15.77■□□□□ 0.12
BRD3-205ENST00000473349 HECW2Q9P2P5 1572 aa15.77■□□□□ 0.11
BRD3-205ENST00000473349 FRMPD1Q5SYB0 1578 aa15.76■□□□□ 0.11
BRD3-205ENST00000473349 EFCAB5A4FU69 1503 aa15.76■□□□□ 0.11
BRD3-205ENST00000473349 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
BRD3-205ENST00000473349 NEO1Q92859 1461 aa15.74■□□□□ 0.11
BRD3-205ENST00000473349 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
BRD3-205ENST00000473349 TTC37Q6PGP7 1564 aa15.73■□□□□ 0.11
BRD3-205ENST00000473349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.73■□□□□ 0.11
BRD3-205ENST00000473349 ARHGAP35Q9NRY4 1499 aa15.71■□□□□ 0.1
BRD3-205ENST00000473349 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
BRD3-205ENST00000473349 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
BRD3-205ENST00000473349 FANCAO15360 1455 aa15.69■□□□□ 0.1
BRD3-205ENST00000473349 AKNAQ7Z591 1439 aa15.68■□□□□ 0.1
BRD3-205ENST00000473349 ARID4BQ4LE39 1312 aaPredicted RBP15.67■□□□□ 0.1
BRD3-205ENST00000473349 DENND4BO75064 1496 aaPredicted RBP15.66■□□□□ 0.1
BRD3-205ENST00000473349 RICTORQ6R327 1708 aa15.66■□□□□ 0.1
BRD3-205ENST00000473349 ILDR1Q86SU0 546 aaPredicted RBP15.66■□□□□ 0.1
BRD3-205ENST00000473349 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
BRD3-205ENST00000473349 PTPRMP28827 1452 aa15.65■□□□□ 0.1
BRD3-205ENST00000473349 ARHGEF40Q8TER5 1519 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms