RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 KIAA0586Q9BVV6 1533 aa26.29■■□□□ 1.8
PCOLCE-205ENST00000472348 CLASP1Q7Z460 1538 aa26.28■■□□□ 1.8
PCOLCE-205ENST00000472348 IQGAP2Q13576 1575 aa26.2■■□□□ 1.78
PCOLCE-205ENST00000472348 SHROOM2Q13796 1616 aa26.19■■□□□ 1.78
PCOLCE-205ENST00000472348 RIMBP3CA6NJZ7 1639 aa26.16■■□□□ 1.78
PCOLCE-205ENST00000472348 RIMBP3BA6NNM3 1639 aa26.16■■□□□ 1.78
PCOLCE-205ENST00000472348 RIMBP3Q9UFD9 1639 aa26.16■■□□□ 1.78
PCOLCE-205ENST00000472348 TNIKQ9UKE5 1360 aa26.14■■□□□ 1.78
PCOLCE-205ENST00000472348 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
PCOLCE-205ENST00000472348 UGGT2Q9NYU1 1516 aa26.12■■□□□ 1.77
PCOLCE-205ENST00000472348 UBTFP17480 764 aaKnown RBP26.08■■□□□ 1.77
PCOLCE-205ENST00000472348 JPH4Q96JJ6 628 aa26.05■■□□□ 1.76
PCOLCE-205ENST00000472348 EFCAB5A4FU69 1503 aa26.01■■□□□ 1.75
PCOLCE-205ENST00000472348 SAMD9Q5K651 1589 aa25.99■■□□□ 1.75
PCOLCE-205ENST00000472348 CARMIL2Q6F5E8 1435 aa25.97■■□□□ 1.75
PCOLCE-205ENST00000472348 DISP1Q96F81 1524 aa25.93■■□□□ 1.74
PCOLCE-205ENST00000472348 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
PCOLCE-205ENST00000472348 KIAA0556O60303 1618 aa25.93■■□□□ 1.74
PCOLCE-205ENST00000472348 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
PCOLCE-205ENST00000472348 PRG4Q92954 1404 aaPredicted RBP25.93■■□□□ 1.74
PCOLCE-205ENST00000472348 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
PCOLCE-205ENST00000472348 CLIP1P30622 1438 aa25.84■■□□□ 1.73
PCOLCE-205ENST00000472348 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
PCOLCE-205ENST00000472348 ARHGAP35Q9NRY4 1499 aa25.84■■□□□ 1.73
PCOLCE-205ENST00000472348 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
PCOLCE-205ENST00000472348 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
PCOLCE-205ENST00000472348 FMN1Q68DA7 1419 aa25.72■■□□□ 1.71
PCOLCE-205ENST00000472348 PTPRGP23470 1445 aa25.71■■□□□ 1.71
PCOLCE-205ENST00000472348 FHOD3Q2V2M9 1422 aa25.67■■□□□ 1.7
PCOLCE-205ENST00000472348 UHRF1BP1LA0JNW5 1464 aa25.64■■□□□ 1.69
PCOLCE-205ENST00000472348 ABCA8O94911 1581 aa25.64■■□□□ 1.69
PCOLCE-205ENST00000472348 RANGAP1P46060 587 aaPredicted RBP25.6■■□□□ 1.69
PCOLCE-205ENST00000472348 UACAQ9BZF9 1416 aa25.6■■□□□ 1.69
PCOLCE-205ENST00000472348 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
PCOLCE-205ENST00000472348 P3H3Q8IVL6 736 aa25.58■■□□□ 1.69
PCOLCE-205ENST00000472348 ABCC2Q92887 1545 aa25.58■■□□□ 1.68
PCOLCE-205ENST00000472348 VPS8Q8N3P4 1428 aa25.56■■□□□ 1.68
PCOLCE-205ENST00000472348 CASKIN1Q8WXD9 1431 aa25.55■■□□□ 1.68
PCOLCE-205ENST00000472348 FYCO1Q9BQS8 1478 aa25.54■■□□□ 1.68
PCOLCE-205ENST00000472348 HECW1Q76N89 1606 aa25.52■■□□□ 1.68
PCOLCE-205ENST00000472348 PLB1Q6P1J6 1458 aa25.52■■□□□ 1.68
PCOLCE-205ENST00000472348 ADCY10Q96PN6 1610 aa25.51■■□□□ 1.67
PCOLCE-205ENST00000472348 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
PCOLCE-205ENST00000472348 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
PCOLCE-205ENST00000472348 NUP153P49790 1475 aaKnown RBP25.46■■□□□ 1.67
PCOLCE-205ENST00000472348 TRHP20396 242 aaPredicted RBP25.44■■□□□ 1.66
PCOLCE-205ENST00000472348 CCDC18Q5T9S5 1454 aa25.44■■□□□ 1.66
PCOLCE-205ENST00000472348 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
PCOLCE-205ENST00000472348 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
PCOLCE-205ENST00000472348 LRRIQ1Q96JM4 1722 aa25.38■■□□□ 1.65
PCOLCE-205ENST00000472348 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
PCOLCE-205ENST00000472348 ZCCHC11Q5TAX3 1644 aaKnown RBP25.37■■□□□ 1.65
PCOLCE-205ENST00000472348 ATP10BO94823 1461 aa25.37■■□□□ 1.65
PCOLCE-205ENST00000472348 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
PCOLCE-205ENST00000472348 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
PCOLCE-205ENST00000472348 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
PCOLCE-205ENST00000472348 TIAM1Q13009 1591 aa25.28■■□□□ 1.64
PCOLCE-205ENST00000472348 CDK11AQ9UQ88 783 aaPredicted RBP25.27■■□□□ 1.64
PCOLCE-205ENST00000472348 CDK13Q14004 1512 aaKnown RBP25.24■■□□□ 1.63
PCOLCE-205ENST00000472348 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
PCOLCE-205ENST00000472348 ATP1B4Q9UN42 357 aaPredicted RBP25.2■■□□□ 1.62
PCOLCE-205ENST00000472348 WDR7Q9Y4E6 1490 aa25.2■■□□□ 1.62
PCOLCE-205ENST00000472348 PLEKHD1A6NEE1 506 aa25.19■■□□□ 1.62
PCOLCE-205ENST00000472348 APLP2Q06481 763 aa25.19■■□□□ 1.62
PCOLCE-205ENST00000472348 ASXL2Q76L83 1435 aa25.19■■□□□ 1.62
PCOLCE-205ENST00000472348 TROQ12816 1431 aaPredicted RBP25.18■■□□□ 1.62
PCOLCE-205ENST00000472348 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
PCOLCE-205ENST00000472348 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
PCOLCE-205ENST00000472348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.13■■□□□ 1.61
PCOLCE-205ENST00000472348 HNRNPUL2Q1KMD3 747 aaKnown RBP25.13■■□□□ 1.61
PCOLCE-205ENST00000472348 GLI2P10070 1586 aa25.13■■□□□ 1.61
PCOLCE-205ENST00000472348 MAGI3Q5TCQ9 1506 aa25.12■■□□□ 1.61
PCOLCE-205ENST00000472348 ABCC10Q5T3U5 1492 aa25.1■■□□□ 1.61
PCOLCE-205ENST00000472348 MTUS2Q5JR59 1369 aa25.1■■□□□ 1.61
PCOLCE-205ENST00000472348 KIF14Q15058 1648 aa25.09■■□□□ 1.61
PCOLCE-205ENST00000472348 KIF13AQ9H1H9 1805 aa25.09■■□□□ 1.61
PCOLCE-205ENST00000472348 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
PCOLCE-205ENST00000472348 DIP2BQ9P265 1576 aa25.07■■□□□ 1.6
PCOLCE-205ENST00000472348 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
PCOLCE-205ENST00000472348 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
PCOLCE-205ENST00000472348 FAM69CQ0P6D2 419 aa25.02■■□□□ 1.6
PCOLCE-205ENST00000472348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25■■□□□ 1.59
PCOLCE-205ENST00000472348 ARAP3Q8WWN8 1544 aa25■■□□□ 1.59
PCOLCE-205ENST00000472348 MAP3K4Q9Y6R4 1608 aa24.99■■□□□ 1.59
PCOLCE-205ENST00000472348 KANK4Q5T7N3 995 aaPredicted RBP24.98■■□□□ 1.59
PCOLCE-205ENST00000472348 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.59
PCOLCE-205ENST00000472348 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
PCOLCE-205ENST00000472348 NCOA2Q15596 1464 aa24.95■■□□□ 1.58
PCOLCE-205ENST00000472348 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
PCOLCE-205ENST00000472348 CDC42BPAQ5VT25 1732 aa24.92■■□□□ 1.58
PCOLCE-205ENST00000472348 KCNH8Q96L42 1107 aa24.91■■□□□ 1.58
PCOLCE-205ENST00000472348 PREX2Q70Z35 1606 aa24.9■■□□□ 1.58
PCOLCE-205ENST00000472348 PLCH2O75038 1416 aa24.89■■□□□ 1.58
PCOLCE-205ENST00000472348 CD109Q6YHK3 1445 aa24.87■■□□□ 1.57
PCOLCE-205ENST00000472348 GPATCH8Q9UKJ3 1502 aaKnown RBP24.87■■□□□ 1.57
PCOLCE-205ENST00000472348 CFAP74Q9C0B2 1584 aa24.87■■□□□ 1.57
PCOLCE-205ENST00000472348 CDC42BPBQ9Y5S2 1711 aa24.86■■□□□ 1.57
PCOLCE-205ENST00000472348 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
PCOLCE-205ENST00000472348 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
PCOLCE-205ENST00000472348 PHLDB1Q86UU1 1377 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms