RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 PRXQ9BXM0 1461 aa21.32■■□□□ 1
SEC16A-209ENST00000472305 RAPGEF2Q9Y4G8 1499 aa21.29■■□□□ 1
SEC16A-209ENST00000472305 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
SEC16A-209ENST00000472305 NUP160Q12769 1436 aa21.25■□□□□ 0.99
SEC16A-209ENST00000472305 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
SEC16A-209ENST00000472305 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
SEC16A-209ENST00000472305 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
SEC16A-209ENST00000472305 KIF21BO75037 1637 aa21.14■□□□□ 0.97
SEC16A-209ENST00000472305 KIAA0586Q9BVV6 1533 aa21.11■□□□□ 0.97
SEC16A-209ENST00000472305 JPH4Q96JJ6 628 aa21.09■□□□□ 0.97
SEC16A-209ENST00000472305 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
SEC16A-209ENST00000472305 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
SEC16A-209ENST00000472305 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
SEC16A-209ENST00000472305 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.95
SEC16A-209ENST00000472305 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
SEC16A-209ENST00000472305 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
SEC16A-209ENST00000472305 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
SEC16A-209ENST00000472305 SHROOM2Q13796 1616 aa21■□□□□ 0.95
SEC16A-209ENST00000472305 CTTNBP2Q8WZ74 1663 aa20.97■□□□□ 0.95
SEC16A-209ENST00000472305 UGGT2Q9NYU1 1516 aa20.93■□□□□ 0.94
SEC16A-209ENST00000472305 DISP1Q96F81 1524 aa20.91■□□□□ 0.94
SEC16A-209ENST00000472305 TNIKQ9UKE5 1360 aa20.91■□□□□ 0.94
SEC16A-209ENST00000472305 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
SEC16A-209ENST00000472305 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
SEC16A-209ENST00000472305 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
SEC16A-209ENST00000472305 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
SEC16A-209ENST00000472305 SAMD9Q5K651 1589 aa20.79■□□□□ 0.92
SEC16A-209ENST00000472305 PTPRGP23470 1445 aa20.78■□□□□ 0.92
SEC16A-209ENST00000472305 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
SEC16A-209ENST00000472305 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
SEC16A-209ENST00000472305 CLIP1P30622 1438 aa20.74■□□□□ 0.91
SEC16A-209ENST00000472305 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
SEC16A-209ENST00000472305 EFCAB5A4FU69 1503 aa20.73■□□□□ 0.91
SEC16A-209ENST00000472305 PLB1Q6P1J6 1458 aa20.66■□□□□ 0.9
SEC16A-209ENST00000472305 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
SEC16A-209ENST00000472305 ABCA8O94911 1581 aa20.6■□□□□ 0.89
SEC16A-209ENST00000472305 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
SEC16A-209ENST00000472305 ADCY10Q96PN6 1610 aa20.59■□□□□ 0.89
SEC16A-209ENST00000472305 ABCC2Q92887 1545 aa20.57■□□□□ 0.88
SEC16A-209ENST00000472305 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
SEC16A-209ENST00000472305 ILDR1Q86SU0 546 aaPredicted RBP20.56■□□□□ 0.88
SEC16A-209ENST00000472305 FMN1Q68DA7 1419 aa20.55■□□□□ 0.88
SEC16A-209ENST00000472305 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
SEC16A-209ENST00000472305 RAPGEF6Q8TEU7 1601 aa20.52■□□□□ 0.88
SEC16A-209ENST00000472305 NUP153P49790 1475 aaKnown RBP20.51■□□□□ 0.87
SEC16A-209ENST00000472305 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
SEC16A-209ENST00000472305 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
SEC16A-209ENST00000472305 ATP10BO94823 1461 aa20.48■□□□□ 0.87
SEC16A-209ENST00000472305 CASKIN1Q8WXD9 1431 aa20.47■□□□□ 0.87
SEC16A-209ENST00000472305 PCF11O94913 1555 aaKnown RBP20.46■□□□□ 0.87
SEC16A-209ENST00000472305 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
SEC16A-209ENST00000472305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
SEC16A-209ENST00000472305 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
SEC16A-209ENST00000472305 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
SEC16A-209ENST00000472305 ZCCHC11Q5TAX3 1644 aaKnown RBP20.42■□□□□ 0.86
SEC16A-209ENST00000472305 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
SEC16A-209ENST00000472305 EPRSP07814 1512 aaKnown RBP20.41■□□□□ 0.86
SEC16A-209ENST00000472305 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
SEC16A-209ENST00000472305 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.85
SEC16A-209ENST00000472305 ASXL2Q76L83 1435 aa20.38■□□□□ 0.85
SEC16A-209ENST00000472305 LRRIQ1Q96JM4 1722 aa20.36■□□□□ 0.85
SEC16A-209ENST00000472305 MAPKBP1O60336 1514 aa20.36■□□□□ 0.85
SEC16A-209ENST00000472305 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
SEC16A-209ENST00000472305 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
SEC16A-209ENST00000472305 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
SEC16A-209ENST00000472305 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
SEC16A-209ENST00000472305 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
SEC16A-209ENST00000472305 FAM69CQ0P6D2 419 aa20.28■□□□□ 0.84
SEC16A-209ENST00000472305 MAGI3Q5TCQ9 1506 aa20.27■□□□□ 0.84
SEC16A-209ENST00000472305 ABCC10Q5T3U5 1492 aa20.27■□□□□ 0.84
SEC16A-209ENST00000472305 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
SEC16A-209ENST00000472305 KANK4Q5T7N3 995 aaPredicted RBP20.24■□□□□ 0.83
SEC16A-209ENST00000472305 DIP2BQ9P265 1576 aa20.22■□□□□ 0.83
SEC16A-209ENST00000472305 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
SEC16A-209ENST00000472305 TIAM1Q13009 1591 aa20.21■□□□□ 0.83
SEC16A-209ENST00000472305 APLP2Q06481 763 aa20.19■□□□□ 0.82
SEC16A-209ENST00000472305 KDM6BO15054 1643 aa20.19■□□□□ 0.82
SEC16A-209ENST00000472305 CFAP43Q8NDM7 1665 aa20.17■□□□□ 0.82
SEC16A-209ENST00000472305 MTUS2Q5JR59 1369 aa20.17■□□□□ 0.82
SEC16A-209ENST00000472305 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
SEC16A-209ENST00000472305 GLI2P10070 1586 aa20.17■□□□□ 0.82
SEC16A-209ENST00000472305 KIF14Q15058 1648 aa20.16■□□□□ 0.82
SEC16A-209ENST00000472305 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
SEC16A-209ENST00000472305 LRRC9Q6ZRR7 1453 aa20.15■□□□□ 0.82
SEC16A-209ENST00000472305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.13■□□□□ 0.81
SEC16A-209ENST00000472305 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
SEC16A-209ENST00000472305 EHBP1L1Q8N3D4 1523 aa20.11■□□□□ 0.81
SEC16A-209ENST00000472305 TTC37Q6PGP7 1564 aa20.1■□□□□ 0.81
SEC16A-209ENST00000472305 ABCA9Q8IUA7 1624 aa20.09■□□□□ 0.81
SEC16A-209ENST00000472305 MAP3K4Q9Y6R4 1608 aa20.07■□□□□ 0.8
SEC16A-209ENST00000472305 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
SEC16A-209ENST00000472305 TSPOAP1O95153 1857 aa20.04■□□□□ 0.8
SEC16A-209ENST00000472305 PPRC1Q5VV67 1664 aaKnown RBP20.03■□□□□ 0.8
SEC16A-209ENST00000472305 PLCH2O75038 1416 aa20.02■□□□□ 0.8
SEC16A-209ENST00000472305 GPATCH8Q9UKJ3 1502 aaKnown RBP20.02■□□□□ 0.79
SEC16A-209ENST00000472305 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
SEC16A-209ENST00000472305 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
SEC16A-209ENST00000472305 HECW2Q9P2P5 1572 aa19.99■□□□□ 0.79
SEC16A-209ENST00000472305 ADGRL1O94910 1474 aa19.99■□□□□ 0.79
SEC16A-209ENST00000472305 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms