RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
TSPAN1-205ENST00000472170 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
TSPAN1-205ENST00000472170 KIAA0586Q9BVV6 1533 aa14.02□□□□□ -0.16
TSPAN1-205ENST00000472170 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.17
TSPAN1-205ENST00000472170 SHROOM2Q13796 1616 aa14□□□□□ -0.17
TSPAN1-205ENST00000472170 RAPGEF2Q9Y4G8 1499 aa13.98□□□□□ -0.17
TSPAN1-205ENST00000472170 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
TSPAN1-205ENST00000472170 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
TSPAN1-205ENST00000472170 ERCC6L2Q5T890 1561 aa13.94□□□□□ -0.18
TSPAN1-205ENST00000472170 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
TSPAN1-205ENST00000472170 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
TSPAN1-205ENST00000472170 PTPRGP23470 1445 aa13.9□□□□□ -0.18
TSPAN1-205ENST00000472170 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
TSPAN1-205ENST00000472170 TNIKQ9UKE5 1360 aa13.88□□□□□ -0.19
TSPAN1-205ENST00000472170 EEA1Q15075 1411 aa13.88□□□□□ -0.19
TSPAN1-205ENST00000472170 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
TSPAN1-205ENST00000472170 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
TSPAN1-205ENST00000472170 FAM69CQ0P6D2 419 aa13.81□□□□□ -0.2
TSPAN1-205ENST00000472170 CHIC1Q5VXU3 224 aa13.81□□□□□ -0.2
TSPAN1-205ENST00000472170 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
TSPAN1-205ENST00000472170 UGGT2Q9NYU1 1516 aa13.79□□□□□ -0.2
TSPAN1-205ENST00000472170 UACAQ9BZF9 1416 aa13.77□□□□□ -0.21
TSPAN1-205ENST00000472170 DISP1Q96F81 1524 aa13.75□□□□□ -0.21
TSPAN1-205ENST00000472170 ADCY10Q96PN6 1610 aa13.75□□□□□ -0.21
TSPAN1-205ENST00000472170 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
TSPAN1-205ENST00000472170 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
TSPAN1-205ENST00000472170 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
TSPAN1-205ENST00000472170 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
TSPAN1-205ENST00000472170 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
TSPAN1-205ENST00000472170 ABCC2Q92887 1545 aa13.72□□□□□ -0.21
TSPAN1-205ENST00000472170 UHRF1BP1LA0JNW5 1464 aa13.72□□□□□ -0.21
TSPAN1-205ENST00000472170 ABCC10Q5T3U5 1492 aa13.72□□□□□ -0.21
TSPAN1-205ENST00000472170 PLB1Q6P1J6 1458 aa13.7□□□□□ -0.22
TSPAN1-205ENST00000472170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
TSPAN1-205ENST00000472170 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
TSPAN1-205ENST00000472170 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
TSPAN1-205ENST00000472170 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
TSPAN1-205ENST00000472170 ASXL2Q76L83 1435 aa13.66□□□□□ -0.22
TSPAN1-205ENST00000472170 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
TSPAN1-205ENST00000472170 KCNH8Q96L42 1107 aa13.64□□□□□ -0.23
TSPAN1-205ENST00000472170 KIF21BO75037 1637 aa13.64□□□□□ -0.23
TSPAN1-205ENST00000472170 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
TSPAN1-205ENST00000472170 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
TSPAN1-205ENST00000472170 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
TSPAN1-205ENST00000472170 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
TSPAN1-205ENST00000472170 ATP1B4Q9UN42 357 aaPredicted RBP13.58□□□□□ -0.24
TSPAN1-205ENST00000472170 ABCA8O94911 1581 aa13.58□□□□□ -0.24
TSPAN1-205ENST00000472170 GLI2P10070 1586 aa13.58□□□□□ -0.24
TSPAN1-205ENST00000472170 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
TSPAN1-205ENST00000472170 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
TSPAN1-205ENST00000472170 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
TSPAN1-205ENST00000472170 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
TSPAN1-205ENST00000472170 EFCAB5A4FU69 1503 aa13.55□□□□□ -0.24
TSPAN1-205ENST00000472170 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
TSPAN1-205ENST00000472170 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-205ENST00000472170 FHOD3Q2V2M9 1422 aa13.53□□□□□ -0.24
TSPAN1-205ENST00000472170 KDM6BO15054 1643 aa13.53□□□□□ -0.24
TSPAN1-205ENST00000472170 CD109Q6YHK3 1445 aa13.52□□□□□ -0.25
TSPAN1-205ENST00000472170 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
TSPAN1-205ENST00000472170 ATP10BO94823 1461 aa13.51□□□□□ -0.25
TSPAN1-205ENST00000472170 FMN1Q68DA7 1419 aa13.5□□□□□ -0.25
TSPAN1-205ENST00000472170 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
TSPAN1-205ENST00000472170 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
TSPAN1-205ENST00000472170 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
TSPAN1-205ENST00000472170 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
TSPAN1-205ENST00000472170 MAGI3Q5TCQ9 1506 aa13.44□□□□□ -0.26
TSPAN1-205ENST00000472170 NUP153P49790 1475 aaKnown RBP13.43□□□□□ -0.26
TSPAN1-205ENST00000472170 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
TSPAN1-205ENST00000472170 ARHGAP35Q9NRY4 1499 aa13.41□□□□□ -0.26
TSPAN1-205ENST00000472170 PPRC1Q5VV67 1664 aaKnown RBP13.4□□□□□ -0.26
TSPAN1-205ENST00000472170 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
TSPAN1-205ENST00000472170 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
TSPAN1-205ENST00000472170 CLIP1P30622 1438 aa13.37□□□□□ -0.27
TSPAN1-205ENST00000472170 NEO1Q92859 1461 aa13.35□□□□□ -0.27
TSPAN1-205ENST00000472170 EFCAB2Q5VUJ9 269 aa13.34□□□□□ -0.27
TSPAN1-205ENST00000472170 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
TSPAN1-205ENST00000472170 CASKIN1Q8WXD9 1431 aa13.32□□□□□ -0.28
TSPAN1-205ENST00000472170 CCDC18Q5T9S5 1454 aa13.32□□□□□ -0.28
TSPAN1-205ENST00000472170 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
TSPAN1-205ENST00000472170 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
TSPAN1-205ENST00000472170 RAPGEF3O95398 923 aa13.3□□□□□ -0.28
TSPAN1-205ENST00000472170 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
TSPAN1-205ENST00000472170 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
TSPAN1-205ENST00000472170 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
TSPAN1-205ENST00000472170 AKNAQ7Z591 1439 aa13.29□□□□□ -0.28
TSPAN1-205ENST00000472170 FANCAO15360 1455 aa13.29□□□□□ -0.28
TSPAN1-205ENST00000472170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSPAN1-205ENST00000472170 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-205ENST00000472170 DENND4BO75064 1496 aaPredicted RBP13.28□□□□□ -0.28
TSPAN1-205ENST00000472170 PLCH2O75038 1416 aa13.27□□□□□ -0.29
TSPAN1-205ENST00000472170 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
TSPAN1-205ENST00000472170 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
TSPAN1-205ENST00000472170 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
TSPAN1-205ENST00000472170 KIF14Q15058 1648 aa13.26□□□□□ -0.29
TSPAN1-205ENST00000472170 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
TSPAN1-205ENST00000472170 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
TSPAN1-205ENST00000472170 APLP2Q06481 763 aa13.23□□□□□ -0.29
TSPAN1-205ENST00000472170 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
TSPAN1-205ENST00000472170 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
TSPAN1-205ENST00000472170 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms