RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
UBXN11-213ENST00000472155 CCNB3Q8WWL7 1395 aa22.43■■□□□ 1.18
UBXN11-213ENST00000472155 CUL7Q14999 1698 aa22.41■■□□□ 1.18
UBXN11-213ENST00000472155 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
UBXN11-213ENST00000472155 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
UBXN11-213ENST00000472155 DHX57Q6P158 1386 aaKnown RBP22.39■■□□□ 1.18
UBXN11-213ENST00000472155 LRRC9Q6ZRR7 1453 aa22.39■■□□□ 1.17
UBXN11-213ENST00000472155 PHLDB1Q86UU1 1377 aa22.38■■□□□ 1.17
UBXN11-213ENST00000472155 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
UBXN11-213ENST00000472155 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
UBXN11-213ENST00000472155 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
UBXN11-213ENST00000472155 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
UBXN11-213ENST00000472155 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
UBXN11-213ENST00000472155 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.164e-14■■■■■ 52.8
UBXN11-213ENST00000472155 CFAP43Q8NDM7 1665 aa22.28■■□□□ 1.16
UBXN11-213ENST00000472155 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.16
UBXN11-213ENST00000472155 EFCAB5A4FU69 1503 aa22.27■■□□□ 1.15
UBXN11-213ENST00000472155 CASKIN1Q8WXD9 1431 aa22.25■■□□□ 1.15
UBXN11-213ENST00000472155 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
UBXN11-213ENST00000472155 RAB3GAP2Q9H2M9 1393 aa22.22■■□□□ 1.15
UBXN11-213ENST00000472155 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
UBXN11-213ENST00000472155 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
UBXN11-213ENST00000472155 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
UBXN11-213ENST00000472155 LRRIQ1Q96JM4 1722 aa22.18■■□□□ 1.14
UBXN11-213ENST00000472155 SAMD9Q5K651 1589 aa22.18■■□□□ 1.14
UBXN11-213ENST00000472155 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
UBXN11-213ENST00000472155 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
UBXN11-213ENST00000472155 FMN1Q68DA7 1419 aa22.16■■□□□ 1.14
UBXN11-213ENST00000472155 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
UBXN11-213ENST00000472155 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
UBXN11-213ENST00000472155 MIER1Q8N108 512 aa22.1■■□□□ 1.13
UBXN11-213ENST00000472155 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
UBXN11-213ENST00000472155 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
UBXN11-213ENST00000472155 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
UBXN11-213ENST00000472155 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.13
UBXN11-213ENST00000472155 GRIN2BQ13224 1484 aa22.08■■□□□ 1.13
UBXN11-213ENST00000472155 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
UBXN11-213ENST00000472155 FGD6Q6ZV73 1430 aa22.03■■□□□ 1.12
UBXN11-213ENST00000472155 MAGI3Q5TCQ9 1506 aa22.02■■□□□ 1.12
UBXN11-213ENST00000472155 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.12
UBXN11-213ENST00000472155 WDR62O43379 1518 aa22.01■■□□□ 1.11
UBXN11-213ENST00000472155 PTPRKQ15262 1439 aa22.01■■□□□ 1.11
UBXN11-213ENST00000472155 IQGAP2Q13576 1575 aa22.01■■□□□ 1.11
UBXN11-213ENST00000472155 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
UBXN11-213ENST00000472155 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
UBXN11-213ENST00000472155 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
UBXN11-213ENST00000472155 NCOA2Q15596 1464 aa21.99■■□□□ 1.11
UBXN11-213ENST00000472155 ERCC6Q03468 1493 aa21.97■■□□□ 1.11
UBXN11-213ENST00000472155 CDK13Q14004 1512 aaKnown RBP21.94■■□□□ 1.1
UBXN11-213ENST00000472155 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
UBXN11-213ENST00000472155 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
UBXN11-213ENST00000472155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.1
UBXN11-213ENST00000472155 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
UBXN11-213ENST00000472155 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
UBXN11-213ENST00000472155 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
UBXN11-213ENST00000472155 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
UBXN11-213ENST00000472155 FBLN2P98095 1184 aa21.86■■□□□ 1.09
UBXN11-213ENST00000472155 UGGT2Q9NYU1 1516 aa21.86■■□□□ 1.09
UBXN11-213ENST00000472155 DISP1Q96F81 1524 aa21.85■■□□□ 1.09
UBXN11-213ENST00000472155 CHIC2Q9UKJ5 165 aa21.85■■□□□ 1.09
UBXN11-213ENST00000472155 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
UBXN11-213ENST00000472155 HECW1Q76N89 1606 aa21.84■■□□□ 1.09
UBXN11-213ENST00000472155 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
UBXN11-213ENST00000472155 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
UBXN11-213ENST00000472155 CENPBP07199 599 aaPredicted RBP21.82■■□□□ 1.08
UBXN11-213ENST00000472155 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
UBXN11-213ENST00000472155 PTPN23Q9H3S7 1636 aa21.81■■□□□ 1.08
UBXN11-213ENST00000472155 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
UBXN11-213ENST00000472155 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
UBXN11-213ENST00000472155 NAIPQ13075 1403 aa21.79■■□□□ 1.08
UBXN11-213ENST00000472155 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
UBXN11-213ENST00000472155 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
UBXN11-213ENST00000472155 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
UBXN11-213ENST00000472155 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
UBXN11-213ENST00000472155 HIRIP3Q9BW71 556 aaPredicted RBP21.75■■□□□ 1.07
UBXN11-213ENST00000472155 NUP153P49790 1475 aaKnown RBP21.74■■□□□ 1.07
UBXN11-213ENST00000472155 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
UBXN11-213ENST00000472155 KDM6BO15054 1643 aa21.7■■□□□ 1.06
UBXN11-213ENST00000472155 MAGI1Q96QZ7 1491 aaPredicted RBP21.69■■□□□ 1.06
UBXN11-213ENST00000472155 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
UBXN11-213ENST00000472155 UACAQ9BZF9 1416 aa21.69■■□□□ 1.06
UBXN11-213ENST00000472155 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
UBXN11-213ENST00000472155 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
UBXN11-213ENST00000472155 PPP1R15AO75807 674 aaPredicted RBP21.66■■□□□ 1.06
UBXN11-213ENST00000472155 RAPGEF6Q8TEU7 1601 aa21.66■■□□□ 1.06
UBXN11-213ENST00000472155 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
UBXN11-213ENST00000472155 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.05
UBXN11-213ENST00000472155 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
UBXN11-213ENST00000472155 TRIM52Q96A61 297 aa21.61■■□□□ 1.05
UBXN11-213ENST00000472155 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
UBXN11-213ENST00000472155 FOXD1Q16676 465 aa21.6■■□□□ 1.05
UBXN11-213ENST00000472155 MIA2Q96PC5 1412 aa21.59■■□□□ 1.05
UBXN11-213ENST00000472155 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
UBXN11-213ENST00000472155 NUP160Q12769 1436 aa21.58■■□□□ 1.05
UBXN11-213ENST00000472155 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
UBXN11-213ENST00000472155 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
UBXN11-213ENST00000472155 GCC2Q8IWJ2 1684 aa21.55■■□□□ 1.04
UBXN11-213ENST00000472155 ABCC5O15440 1437 aa21.53■■□□□ 1.04
UBXN11-213ENST00000472155 DAPK1P53355 1430 aa21.53■■□□□ 1.04
UBXN11-213ENST00000472155 KIF14Q15058 1648 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms