RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
VPS8-221ENST00000471655 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
VPS8-221ENST00000471655 CARMIL1Q5VZK9 1371 aa25.77■■□□□ 1.72
VPS8-221ENST00000471655 KIAA0586Q9BVV6 1533 aa25.77■■□□□ 1.72
VPS8-221ENST00000471655 RAPGEF2Q9Y4G8 1499 aa25.56■■□□□ 1.68
VPS8-221ENST00000471655 IQGAP2Q13576 1575 aa25.52■■□□□ 1.68
VPS8-221ENST00000471655 CARMIL2Q6F5E8 1435 aa25.49■■□□□ 1.67
VPS8-221ENST00000471655 NPM1P06748 294 aaKnown RBP eCLIP25.46■■□□□ 1.67
VPS8-221ENST00000471655 PTPRGP23470 1445 aa25.45■■□□□ 1.66
VPS8-221ENST00000471655 ADCY10Q96PN6 1610 aa25.45■■□□□ 1.66
VPS8-221ENST00000471655 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
VPS8-221ENST00000471655 MAPKBP1O60336 1514 aa25.41■■□□□ 1.66
VPS8-221ENST00000471655 UGGT2Q9NYU1 1516 aa25.4■■□□□ 1.66
VPS8-221ENST00000471655 DISP1Q96F81 1524 aa25.39■■□□□ 1.66
VPS8-221ENST00000471655 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
VPS8-221ENST00000471655 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
VPS8-221ENST00000471655 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
VPS8-221ENST00000471655 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
VPS8-221ENST00000471655 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
VPS8-221ENST00000471655 FAM69CQ0P6D2 419 aa25.28■■□□□ 1.64
VPS8-221ENST00000471655 ABCC2Q92887 1545 aa25.27■■□□□ 1.64
VPS8-221ENST00000471655 KIAA0556O60303 1618 aa25.27■■□□□ 1.64
VPS8-221ENST00000471655 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
VPS8-221ENST00000471655 TTBK1Q5TCY1 1321 aaPredicted RBP25.27■■□□□ 1.64
VPS8-221ENST00000471655 UACAQ9BZF9 1416 aa25.27■■□□□ 1.64
VPS8-221ENST00000471655 DIP2BQ9P265 1576 aa25.25■■□□□ 1.63
VPS8-221ENST00000471655 EEA1Q15075 1411 aa25.24■■□□□ 1.63
VPS8-221ENST00000471655 GOLGA3Q08378 1498 aa25.22■■□□□ 1.63
VPS8-221ENST00000471655 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
VPS8-221ENST00000471655 PLB1Q6P1J6 1458 aa25.16■■□□□ 1.62
VPS8-221ENST00000471655 ASXL2Q76L83 1435 aa25.14■■□□□ 1.62
VPS8-221ENST00000471655 GLI2P10070 1586 aa25.09■■□□□ 1.61
VPS8-221ENST00000471655 ZCCHC11Q5TAX3 1644 aaKnown RBP25.06■■□□□ 1.6
VPS8-221ENST00000471655 ABCA8O94911 1581 aa25.05■■□□□ 1.6
VPS8-221ENST00000471655 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
VPS8-221ENST00000471655 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
VPS8-221ENST00000471655 EPRSP07814 1512 aaKnown RBP25.01■■□□□ 1.59
VPS8-221ENST00000471655 TSPOAP1O95153 1857 aa24.99■■□□□ 1.59
VPS8-221ENST00000471655 SAMD9Q5K651 1589 aa24.99■■□□□ 1.59
VPS8-221ENST00000471655 KIF21BO75037 1637 aa24.97■■□□□ 1.59
VPS8-221ENST00000471655 WDR7Q9Y4E6 1490 aa24.96■■□□□ 1.59
VPS8-221ENST00000471655 KDM6BO15054 1643 aa24.94■■□□□ 1.58
VPS8-221ENST00000471655 P3H3Q8IVL6 736 aa24.94■■□□□ 1.58
VPS8-221ENST00000471655 PPRC1Q5VV67 1664 aaKnown RBP24.93■■□□□ 1.58
VPS8-221ENST00000471655 MAP3K4Q9Y6R4 1608 aa24.92■■□□□ 1.58
VPS8-221ENST00000471655 TEX14Q8IWB6 1497 aa24.85■■□□□ 1.57
VPS8-221ENST00000471655 ATP10BO94823 1461 aa24.84■■□□□ 1.57
VPS8-221ENST00000471655 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
VPS8-221ENST00000471655 RAPGEF6Q8TEU7 1601 aa24.82■■□□□ 1.56
VPS8-221ENST00000471655 EFCAB5A4FU69 1503 aa24.81■■□□□ 1.56
VPS8-221ENST00000471655 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
VPS8-221ENST00000471655 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
VPS8-221ENST00000471655 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
VPS8-221ENST00000471655 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
VPS8-221ENST00000471655 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
VPS8-221ENST00000471655 MAGI3Q5TCQ9 1506 aa24.77■■□□□ 1.56
VPS8-221ENST00000471655 COL17A1Q9UMD9 1497 aaPredicted RBP24.75■■□□□ 1.55
VPS8-221ENST00000471655 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
VPS8-221ENST00000471655 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
VPS8-221ENST00000471655 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
VPS8-221ENST00000471655 ABCA9Q8IUA7 1624 aa24.66■■□□□ 1.54
VPS8-221ENST00000471655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.66■■□□□ 1.54
VPS8-221ENST00000471655 HNRNPUL2Q1KMD3 747 aaKnown RBP24.66■■□□□ 1.54
VPS8-221ENST00000471655 EHMT2Q96KQ7 1210 aa24.63■■□□□ 1.53
VPS8-221ENST00000471655 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
VPS8-221ENST00000471655 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
VPS8-221ENST00000471655 KDM4FA0A1W2PPD8 638 aa24.6■■□□□ 1.53
VPS8-221ENST00000471655 PLEKHD1A6NEE1 506 aa24.6■■□□□ 1.53
VPS8-221ENST00000471655 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
VPS8-221ENST00000471655 ARAP3Q8WWN8 1544 aa24.58■■□□□ 1.53
VPS8-221ENST00000471655 NEO1Q92859 1461 aa24.52■■□□□ 1.52
VPS8-221ENST00000471655 HECW1Q76N89 1606 aa24.49■■□□□ 1.51
VPS8-221ENST00000471655 CDK13Q14004 1512 aaKnown RBP24.48■■□□□ 1.51
VPS8-221ENST00000471655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.51
VPS8-221ENST00000471655 ADGRL1O94910 1474 aa24.45■■□□□ 1.5
VPS8-221ENST00000471655 CDK11AQ9UQ88 783 aaPredicted RBP24.43■■□□□ 1.5
VPS8-221ENST00000471655 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
VPS8-221ENST00000471655 TTC37Q6PGP7 1564 aa24.38■■□□□ 1.49
VPS8-221ENST00000471655 RAPGEF3O95398 923 aa24.37■■□□□ 1.49
VPS8-221ENST00000471655 FANCAO15360 1455 aa24.37■■□□□ 1.49
VPS8-221ENST00000471655 CFAP74Q9C0B2 1584 aa24.37■■□□□ 1.49
VPS8-221ENST00000471655 AKNAQ7Z591 1439 aa24.36■■□□□ 1.49
VPS8-221ENST00000471655 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
VPS8-221ENST00000471655 PLCH2O75038 1416 aa24.35■■□□□ 1.49
VPS8-221ENST00000471655 FRMPD1Q5SYB0 1578 aa24.33■■□□□ 1.49
VPS8-221ENST00000471655 TROQ12816 1431 aaPredicted RBP24.33■■□□□ 1.49
VPS8-221ENST00000471655 DENND4BO75064 1496 aaPredicted RBP24.32■■□□□ 1.48
VPS8-221ENST00000471655 CLIP1P30622 1438 aa24.32■■□□□ 1.48
VPS8-221ENST00000471655 LRRIQ1Q96JM4 1722 aa24.31■■□□□ 1.48
VPS8-221ENST00000471655 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
VPS8-221ENST00000471655 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
VPS8-221ENST00000471655 RICTORQ6R327 1708 aa24.27■■□□□ 1.48
VPS8-221ENST00000471655 KIF14Q15058 1648 aa24.27■■□□□ 1.48
VPS8-221ENST00000471655 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
VPS8-221ENST00000471655 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
VPS8-221ENST00000471655 MYO5CQ9NQX4 1742 aa24.24■■□□□ 1.47
VPS8-221ENST00000471655 ZMYM4Q5VZL5 1548 aa24.22■■□□□ 1.47
VPS8-221ENST00000471655 SCAPERQ9BY12 1400 aa24.2■■□□□ 1.46
VPS8-221ENST00000471655 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
VPS8-221ENST00000471655 ARHGEF40Q8TER5 1519 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms