RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 TRHP20396 242 aaPredicted RBP40.2■■■■■ 4.03
RNF220-208ENST00000471494 JPH4Q96JJ6 628 aa40.17■■■■■ 4.02
RNF220-208ENST00000471494 CARMIL1Q5VZK9 1371 aa40.14■■■■■ 4.02
RNF220-208ENST00000471494 KIAA0586Q9BVV6 1533 aa40.11■■■■■ 4.01
RNF220-208ENST00000471494 IQGAP2Q13576 1575 aa39.88■■■■□ 3.97
RNF220-208ENST00000471494 RAPGEF2Q9Y4G8 1499 aa39.88■■■■□ 3.97
RNF220-208ENST00000471494 CARMIL2Q6F5E8 1435 aa39.73■■■■□ 3.95
RNF220-208ENST00000471494 ADCY10Q96PN6 1610 aa39.72■■■■□ 3.95
RNF220-208ENST00000471494 CTTNBP2Q8WZ74 1663 aa39.66■■■■□ 3.94
RNF220-208ENST00000471494 PTPRGP23470 1445 aa39.63■■■■□ 3.93
RNF220-208ENST00000471494 NPM1P06748 294 aaKnown RBP eCLIP39.62■■■■□ 3.93
RNF220-208ENST00000471494 TNIKQ9UKE5 1360 aa39.61■■■■□ 3.93
RNF220-208ENST00000471494 KIF13AQ9H1H9 1805 aa39.61■■■■□ 3.93
RNF220-208ENST00000471494 UGGT2Q9NYU1 1516 aa39.6■■■■□ 3.93
RNF220-208ENST00000471494 DISP1Q96F81 1524 aa39.58■■■■□ 3.93
RNF220-208ENST00000471494 PRXQ9BXM0 1461 aa39.57■■■■□ 3.93
RNF220-208ENST00000471494 MAPKBP1O60336 1514 aa39.56■■■■□ 3.92
RNF220-208ENST00000471494 TTBK1Q5TCY1 1321 aaPredicted RBP39.56■■■■□ 3.92
RNF220-208ENST00000471494 KIAA0556O60303 1618 aa39.5■■■■□ 3.91
RNF220-208ENST00000471494 ABCC10Q5T3U5 1492 aa39.43■■■■□ 3.9
RNF220-208ENST00000471494 DIP2BQ9P265 1576 aa39.4■■■■□ 3.9
RNF220-208ENST00000471494 ABCC2Q92887 1545 aa39.38■■■■□ 3.89
RNF220-208ENST00000471494 EEA1Q15075 1411 aa39.38■■■■□ 3.89
RNF220-208ENST00000471494 CSRNP3Q8WYN3 585 aa39.37■■■■□ 3.89
RNF220-208ENST00000471494 UHRF1BP1LA0JNW5 1464 aa39.37■■■■□ 3.89
RNF220-208ENST00000471494 UACAQ9BZF9 1416 aa39.36■■■■□ 3.89
RNF220-208ENST00000471494 GOLGA3Q08378 1498 aa39.35■■■■□ 3.89
RNF220-208ENST00000471494 FAM69CQ0P6D2 419 aa39.33■■■■□ 3.89
RNF220-208ENST00000471494 ASXL2Q76L83 1435 aa39.18■■■■□ 3.86
RNF220-208ENST00000471494 KDM5BQ9UGL1 1544 aa39.18■■■■□ 3.86
RNF220-208ENST00000471494 ZCCHC11Q5TAX3 1644 aaKnown RBP39.17■■■■□ 3.86
RNF220-208ENST00000471494 PLB1Q6P1J6 1458 aa39.17■■■■□ 3.86
RNF220-208ENST00000471494 TSPOAP1O95153 1857 aa39.16■■■■□ 3.86
RNF220-208ENST00000471494 FAM9AQ8IZU1 332 aaPredicted RBP39.14■■■■□ 3.86
RNF220-208ENST00000471494 CHIC1Q5VXU3 224 aa39.08■■■■□ 3.85
RNF220-208ENST00000471494 ABCA8O94911 1581 aa39.08■■■■□ 3.85
RNF220-208ENST00000471494 KIF21BO75037 1637 aa39.07■■■■□ 3.84
RNF220-208ENST00000471494 GLI2P10070 1586 aa39.04■■■■□ 3.84
RNF220-208ENST00000471494 SAMD9Q5K651 1589 aa39.04■■■■□ 3.84
RNF220-208ENST00000471494 P3H3Q8IVL6 736 aa38.96■■■■□ 3.83
RNF220-208ENST00000471494 EPRSP07814 1512 aaKnown RBP38.94■■■■□ 3.82
RNF220-208ENST00000471494 KDM6BO15054 1643 aa38.94■■■■□ 3.82
RNF220-208ENST00000471494 WDR7Q9Y4E6 1490 aa38.92■■■■□ 3.82
RNF220-208ENST00000471494 PPRC1Q5VV67 1664 aaKnown RBP38.9■■■■□ 3.82
RNF220-208ENST00000471494 MAP3K4Q9Y6R4 1608 aa38.88■■■■□ 3.81
RNF220-208ENST00000471494 RANGAP1P46060 587 aaPredicted RBP38.84■■■■□ 3.81
RNF220-208ENST00000471494 RAPGEF6Q8TEU7 1601 aa38.8■■■■□ 3.8
RNF220-208ENST00000471494 EFCAB5A4FU69 1503 aa38.77■■■■□ 3.8
RNF220-208ENST00000471494 FHOD3Q2V2M9 1422 aa38.75■■■■□ 3.79
RNF220-208ENST00000471494 TEX14Q8IWB6 1497 aa38.73■■■■□ 3.79
RNF220-208ENST00000471494 ARID3CA6NKF2 412 aa38.71■■■■□ 3.79
RNF220-208ENST00000471494 ATP10BO94823 1461 aa38.71■■■■□ 3.79
RNF220-208ENST00000471494 CFAP43Q8NDM7 1665 aa38.71■■■■□ 3.79
RNF220-208ENST00000471494 EHMT2Q96KQ7 1210 aa38.69■■■■□ 3.78
RNF220-208ENST00000471494 UBTFP17480 764 aaKnown RBP38.67■■■■□ 3.78
RNF220-208ENST00000471494 KCNH8Q96L42 1107 aa38.66■■■■□ 3.78
RNF220-208ENST00000471494 AEBP2Q6ZN18 517 aaPredicted RBP38.61■■■■□ 3.77
RNF220-208ENST00000471494 NUP153P49790 1475 aaKnown RBP38.6■■■■□ 3.77
RNF220-208ENST00000471494 CD109Q6YHK3 1445 aa38.58■■■■□ 3.77
RNF220-208ENST00000471494 MAGI3Q5TCQ9 1506 aa38.55■■■■□ 3.76
RNF220-208ENST00000471494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.52■■■■□ 3.76
RNF220-208ENST00000471494 HNRNPUL2Q1KMD3 747 aaKnown RBP38.52■■■■□ 3.76
RNF220-208ENST00000471494 COL17A1Q9UMD9 1497 aaPredicted RBP38.49■■■■□ 3.75
RNF220-208ENST00000471494 ABCA9Q8IUA7 1624 aa38.48■■■■□ 3.75
RNF220-208ENST00000471494 ARHGAP35Q9NRY4 1499 aa38.43■■■■□ 3.74
RNF220-208ENST00000471494 FMN1Q68DA7 1419 aa38.38■■■■□ 3.73
RNF220-208ENST00000471494 HECW1Q76N89 1606 aa38.33■■■■□ 3.73
RNF220-208ENST00000471494 PLEKHD1A6NEE1 506 aa38.31■■■■□ 3.72
RNF220-208ENST00000471494 CDK13Q14004 1512 aaKnown RBP38.3■■■■□ 3.72
RNF220-208ENST00000471494 ARAP3Q8WWN8 1544 aa38.23■■■■□ 3.71
RNF220-208ENST00000471494 ATP1B4Q9UN42 357 aaPredicted RBP38.21■■■■□ 3.71
RNF220-208ENST00000471494 PHLDB1Q86UU1 1377 aa38.19■■■■□ 3.7
RNF220-208ENST00000471494 NEO1Q92859 1461 aa38.19■■■■□ 3.7
RNF220-208ENST00000471494 KDM4FA0A1W2PPD8 638 aa38.17■■■■□ 3.7
RNF220-208ENST00000471494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.16■■■■□ 3.7
RNF220-208ENST00000471494 TTC37Q6PGP7 1564 aa38.14■■■■□ 3.7
RNF220-208ENST00000471494 CFAP74Q9C0B2 1584 aa38.1■■■■□ 3.69
RNF220-208ENST00000471494 ADGRL1O94910 1474 aa38.1■■■■□ 3.69
RNF220-208ENST00000471494 LRRIQ1Q96JM4 1722 aa38.1■■■■□ 3.69
RNF220-208ENST00000471494 PCF11O94913 1555 aaKnown RBP38.06■■■■□ 3.68
RNF220-208ENST00000471494 CDK11AQ9UQ88 783 aaPredicted RBP38.05■■■■□ 3.68
RNF220-208ENST00000471494 CLIP1P30622 1438 aa38.03■■■■□ 3.68
RNF220-208ENST00000471494 FANCAO15360 1455 aa38.02■■■■□ 3.68
RNF220-208ENST00000471494 CASKIN1Q8WXD9 1431 aa38■■■■□ 3.67
RNF220-208ENST00000471494 KIF14Q15058 1648 aa37.99■■■■□ 3.67
RNF220-208ENST00000471494 FRMPD1Q5SYB0 1578 aa37.99■■■■□ 3.67
RNF220-208ENST00000471494 RAPGEF3O95398 923 aa37.97■■■■□ 3.67
RNF220-208ENST00000471494 MYO5CQ9NQX4 1742 aa37.97■■■■□ 3.67
RNF220-208ENST00000471494 CCDC18Q5T9S5 1454 aa37.96■■■■□ 3.67
RNF220-208ENST00000471494 TROQ12816 1431 aaPredicted RBP37.95■■■■□ 3.67
RNF220-208ENST00000471494 AKNAQ7Z591 1439 aa37.95■■■■□ 3.67
RNF220-208ENST00000471494 RICTORQ6R327 1708 aa37.93■■■■□ 3.66
RNF220-208ENST00000471494 FYCO1Q9BQS8 1478 aa37.92■■■■□ 3.66
RNF220-208ENST00000471494 DENND4BO75064 1496 aaPredicted RBP37.91■■■■□ 3.66
RNF220-208ENST00000471494 PLCH2O75038 1416 aa37.89■■■■□ 3.66
RNF220-208ENST00000471494 ARHGEF40Q8TER5 1519 aa37.8■■■■□ 3.64
RNF220-208ENST00000471494 ZMYM4Q5VZL5 1548 aa37.77■■■■□ 3.64
RNF220-208ENST00000471494 EFCAB2Q5VUJ9 269 aa37.75■■■■□ 3.63
RNF220-208ENST00000471494 ARHGAP5Q13017 1502 aa37.75■■■■□ 3.63
RNF220-208ENST00000471494 SCAPERQ9BY12 1400 aa37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms