RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
HOXB3-206ENST00000471459 KIAA0586Q9BVV6 1533 aa25.3■■□□□ 1.64
HOXB3-206ENST00000471459 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
HOXB3-206ENST00000471459 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
HOXB3-206ENST00000471459 NPM1P06748 294 aaKnown RBP eCLIP25.2■■□□□ 1.62
HOXB3-206ENST00000471459 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
HOXB3-206ENST00000471459 CARMIL2Q6F5E8 1435 aa25.13■■□□□ 1.61
HOXB3-206ENST00000471459 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.6
HOXB3-206ENST00000471459 PTPRGP23470 1445 aa25.07■■□□□ 1.6
HOXB3-206ENST00000471459 IQGAP2Q13576 1575 aa25.04■■□□□ 1.6
HOXB3-206ENST00000471459 TNIKQ9UKE5 1360 aa25.03■■□□□ 1.6
HOXB3-206ENST00000471459 CSRNP3Q8WYN3 585 aa24.99■■□□□ 1.59
HOXB3-206ENST00000471459 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
HOXB3-206ENST00000471459 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
HOXB3-206ENST00000471459 FAM69CQ0P6D2 419 aa24.92■■□□□ 1.58
HOXB3-206ENST00000471459 UGGT2Q9NYU1 1516 aa24.9■■□□□ 1.58
HOXB3-206ENST00000471459 EEA1Q15075 1411 aa24.89■■□□□ 1.58
HOXB3-206ENST00000471459 ADCY10Q96PN6 1610 aa24.88■■□□□ 1.57
HOXB3-206ENST00000471459 DISP1Q96F81 1524 aa24.87■■□□□ 1.57
HOXB3-206ENST00000471459 MAPKBP1O60336 1514 aa24.85■■□□□ 1.57
HOXB3-206ENST00000471459 UACAQ9BZF9 1416 aa24.85■■□□□ 1.57
HOXB3-206ENST00000471459 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
HOXB3-206ENST00000471459 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.56
HOXB3-206ENST00000471459 ABCC2Q92887 1545 aa24.8■■□□□ 1.56
HOXB3-206ENST00000471459 UHRF1BP1LA0JNW5 1464 aa24.79■■□□□ 1.56
HOXB3-206ENST00000471459 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
HOXB3-206ENST00000471459 CTTNBP2Q8WZ74 1663 aa24.77■■□□□ 1.56
HOXB3-206ENST00000471459 KIAA0556O60303 1618 aa24.76■■□□□ 1.55
HOXB3-206ENST00000471459 PLB1Q6P1J6 1458 aa24.72■■□□□ 1.55
HOXB3-206ENST00000471459 ASXL2Q76L83 1435 aa24.7■■□□□ 1.55
HOXB3-206ENST00000471459 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
HOXB3-206ENST00000471459 KIF13AQ9H1H9 1805 aa24.69■■□□□ 1.54
HOXB3-206ENST00000471459 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
HOXB3-206ENST00000471459 KDM5BQ9UGL1 1544 aa24.66■■□□□ 1.54
HOXB3-206ENST00000471459 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
HOXB3-206ENST00000471459 UBTFP17480 764 aaKnown RBP24.58■■□□□ 1.53
HOXB3-206ENST00000471459 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
HOXB3-206ENST00000471459 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
HOXB3-206ENST00000471459 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
HOXB3-206ENST00000471459 ABCA8O94911 1581 aa24.53■■□□□ 1.52
HOXB3-206ENST00000471459 GLI2P10070 1586 aa24.53■■□□□ 1.52
HOXB3-206ENST00000471459 ZCCHC11Q5TAX3 1644 aaKnown RBP24.53■■□□□ 1.52
HOXB3-206ENST00000471459 EPRSP07814 1512 aaKnown RBP24.51■■□□□ 1.51
HOXB3-206ENST00000471459 KIF21BO75037 1637 aa24.51■■□□□ 1.51
HOXB3-206ENST00000471459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
HOXB3-206ENST00000471459 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
HOXB3-206ENST00000471459 WDR7Q9Y4E6 1490 aa24.5■■□□□ 1.51
HOXB3-206ENST00000471459 ARID3CA6NKF2 412 aa24.49■■□□□ 1.51
HOXB3-206ENST00000471459 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
HOXB3-206ENST00000471459 SAMD9Q5K651 1589 aa24.46■■□□□ 1.51
HOXB3-206ENST00000471459 KDM6BO15054 1643 aa24.43■■□□□ 1.5
HOXB3-206ENST00000471459 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
HOXB3-206ENST00000471459 FHOD3Q2V2M9 1422 aa24.41■■□□□ 1.5
HOXB3-206ENST00000471459 ATP10BO94823 1461 aa24.4■■□□□ 1.5
HOXB3-206ENST00000471459 CD109Q6YHK3 1445 aa24.38■■□□□ 1.49
HOXB3-206ENST00000471459 EFCAB5A4FU69 1503 aa24.38■■□□□ 1.49
HOXB3-206ENST00000471459 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
HOXB3-206ENST00000471459 PLEKHD1A6NEE1 506 aa24.34■■□□□ 1.49
HOXB3-206ENST00000471459 MAP3K4Q9Y6R4 1608 aa24.34■■□□□ 1.49
HOXB3-206ENST00000471459 ATP1B4Q9UN42 357 aaPredicted RBP24.31■■□□□ 1.48
HOXB3-206ENST00000471459 MAGI3Q5TCQ9 1506 aa24.28■■□□□ 1.48
HOXB3-206ENST00000471459 PPRC1Q5VV67 1664 aaKnown RBP24.27■■□□□ 1.48
HOXB3-206ENST00000471459 NUP153P49790 1475 aaKnown RBP24.27■■□□□ 1.48
HOXB3-206ENST00000471459 FMN1Q68DA7 1419 aa24.26■■□□□ 1.47
HOXB3-206ENST00000471459 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
HOXB3-206ENST00000471459 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
HOXB3-206ENST00000471459 COL17A1Q9UMD9 1497 aaPredicted RBP24.2■■□□□ 1.47
HOXB3-206ENST00000471459 PHLDB1Q86UU1 1377 aa24.2■■□□□ 1.46
HOXB3-206ENST00000471459 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
HOXB3-206ENST00000471459 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
HOXB3-206ENST00000471459 KDM4FA0A1W2PPD8 638 aa24.1■■□□□ 1.45
HOXB3-206ENST00000471459 ARAP3Q8WWN8 1544 aa24.08■■□□□ 1.45
HOXB3-206ENST00000471459 NEO1Q92859 1461 aa24.07■■□□□ 1.44
HOXB3-206ENST00000471459 HECW1Q76N89 1606 aa24.06■■□□□ 1.44
HOXB3-206ENST00000471459 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
HOXB3-206ENST00000471459 RAPGEF3O95398 923 aa24.03■■□□□ 1.44
HOXB3-206ENST00000471459 CLIP1P30622 1438 aa24.02■■□□□ 1.44
HOXB3-206ENST00000471459 CASKIN1Q8WXD9 1431 aa23.98■■□□□ 1.43
HOXB3-206ENST00000471459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.43
HOXB3-206ENST00000471459 FANCAO15360 1455 aa23.96■■□□□ 1.43
HOXB3-206ENST00000471459 AKNAQ7Z591 1439 aa23.96■■□□□ 1.43
HOXB3-206ENST00000471459 EFCAB2Q5VUJ9 269 aa23.96■■□□□ 1.43
HOXB3-206ENST00000471459 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
HOXB3-206ENST00000471459 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
HOXB3-206ENST00000471459 PLCH2O75038 1416 aa23.93■■□□□ 1.42
HOXB3-206ENST00000471459 TROQ12816 1431 aaPredicted RBP23.93■■□□□ 1.42
HOXB3-206ENST00000471459 CCDC18Q5T9S5 1454 aa23.93■■□□□ 1.42
HOXB3-206ENST00000471459 CFAP74Q9C0B2 1584 aa23.9■■□□□ 1.42
HOXB3-206ENST00000471459 TTC37Q6PGP7 1564 aa23.89■■□□□ 1.41
HOXB3-206ENST00000471459 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
HOXB3-206ENST00000471459 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
HOXB3-206ENST00000471459 KIF14Q15058 1648 aa23.85■■□□□ 1.41
HOXB3-206ENST00000471459 SCAPERQ9BY12 1400 aa23.84■■□□□ 1.41
HOXB3-206ENST00000471459 PCF11O94913 1555 aaKnown RBP23.84■■□□□ 1.41
HOXB3-206ENST00000471459 CEP162Q5TB80 1403 aa23.79■■□□□ 1.4
HOXB3-206ENST00000471459 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
HOXB3-206ENST00000471459 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
HOXB3-206ENST00000471459 ARHGAP5Q13017 1502 aa23.78■■□□□ 1.4
HOXB3-206ENST00000471459 MAGI2Q86UL8 1455 aa23.76■■□□□ 1.39
HOXB3-206ENST00000471459 MYO5CQ9NQX4 1742 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms