RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
COL1A1-203ENST00000471344 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
COL1A1-203ENST00000471344 CARMIL1Q5VZK9 1371 aa26.54■■□□□ 1.84
COL1A1-203ENST00000471344 KIAA0586Q9BVV6 1533 aa26.54■■□□□ 1.84
COL1A1-203ENST00000471344 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.81
COL1A1-203ENST00000471344 IQGAP2Q13576 1575 aa26.37■■□□□ 1.81
COL1A1-203ENST00000471344 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
COL1A1-203ENST00000471344 KIF13AQ9H1H9 1805 aa26.32■■□□□ 1.8
COL1A1-203ENST00000471344 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
COL1A1-203ENST00000471344 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
COL1A1-203ENST00000471344 PTPRGP23470 1445 aa26.23■■□□□ 1.79
COL1A1-203ENST00000471344 MAPKBP1O60336 1514 aa26.23■■□□□ 1.79
COL1A1-203ENST00000471344 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
COL1A1-203ENST00000471344 TNIKQ9UKE5 1360 aa26.2■■□□□ 1.79
COL1A1-203ENST00000471344 UGGT2Q9NYU1 1516 aa26.19■■□□□ 1.78
COL1A1-203ENST00000471344 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
COL1A1-203ENST00000471344 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
COL1A1-203ENST00000471344 DIP2BQ9P265 1576 aa26.17■■□□□ 1.78
COL1A1-203ENST00000471344 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
COL1A1-203ENST00000471344 PRXQ9BXM0 1461 aa26.16■■□□□ 1.78
COL1A1-203ENST00000471344 KIAA0556O60303 1618 aa26.15■■□□□ 1.78
COL1A1-203ENST00000471344 FAM69CQ0P6D2 419 aa26.12■■□□□ 1.77
COL1A1-203ENST00000471344 ABCC2Q92887 1545 aa26.09■■□□□ 1.77
COL1A1-203ENST00000471344 UACAQ9BZF9 1416 aa26.05■■□□□ 1.76
COL1A1-203ENST00000471344 UHRF1BP1LA0JNW5 1464 aa26.05■■□□□ 1.76
COL1A1-203ENST00000471344 TSPOAP1O95153 1857 aa26■■□□□ 1.75
COL1A1-203ENST00000471344 ASXL2Q76L83 1435 aa25.99■■□□□ 1.75
COL1A1-203ENST00000471344 ZCCHC11Q5TAX3 1644 aaKnown RBP25.96■■□□□ 1.75
COL1A1-203ENST00000471344 KDM5BQ9UGL1 1544 aa25.95■■□□□ 1.74
COL1A1-203ENST00000471344 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
COL1A1-203ENST00000471344 PLB1Q6P1J6 1458 aa25.95■■□□□ 1.74
COL1A1-203ENST00000471344 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
COL1A1-203ENST00000471344 ABCA8O94911 1581 aa25.88■■□□□ 1.73
COL1A1-203ENST00000471344 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
COL1A1-203ENST00000471344 PPRC1Q5VV67 1664 aaKnown RBP25.87■■□□□ 1.73
COL1A1-203ENST00000471344 GLI2P10070 1586 aa25.87■■□□□ 1.73
COL1A1-203ENST00000471344 EEA1Q15075 1411 aa25.87■■□□□ 1.73
COL1A1-203ENST00000471344 KDM6BO15054 1643 aa25.85■■□□□ 1.73
COL1A1-203ENST00000471344 EPRSP07814 1512 aaKnown RBP25.84■■□□□ 1.73
COL1A1-203ENST00000471344 P3H3Q8IVL6 736 aa25.83■■□□□ 1.73
COL1A1-203ENST00000471344 SAMD9Q5K651 1589 aa25.82■■□□□ 1.72
COL1A1-203ENST00000471344 MAP3K4Q9Y6R4 1608 aa25.79■■□□□ 1.72
COL1A1-203ENST00000471344 WDR7Q9Y4E6 1490 aa25.78■■□□□ 1.72
COL1A1-203ENST00000471344 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
COL1A1-203ENST00000471344 KIF21BO75037 1637 aa25.74■■□□□ 1.71
COL1A1-203ENST00000471344 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
COL1A1-203ENST00000471344 RANGAP1P46060 587 aaPredicted RBP25.72■■□□□ 1.71
COL1A1-203ENST00000471344 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
COL1A1-203ENST00000471344 FHOD3Q2V2M9 1422 aa25.66■■□□□ 1.7
COL1A1-203ENST00000471344 RAPGEF6Q8TEU7 1601 aa25.66■■□□□ 1.7
COL1A1-203ENST00000471344 COL17A1Q9UMD9 1497 aaPredicted RBP25.66■■□□□ 1.7
COL1A1-203ENST00000471344 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
COL1A1-203ENST00000471344 ATP10BO94823 1461 aa25.65■■□□□ 1.7
COL1A1-203ENST00000471344 KCNH8Q96L42 1107 aa25.63■■□□□ 1.69
COL1A1-203ENST00000471344 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
COL1A1-203ENST00000471344 TEX14Q8IWB6 1497 aa25.6■■□□□ 1.69
COL1A1-203ENST00000471344 NUP153P49790 1475 aaKnown RBP25.57■■□□□ 1.68
COL1A1-203ENST00000471344 CD109Q6YHK3 1445 aa25.56■■□□□ 1.68
COL1A1-203ENST00000471344 EFCAB5A4FU69 1503 aa25.55■■□□□ 1.68
COL1A1-203ENST00000471344 MAGI3Q5TCQ9 1506 aa25.53■■□□□ 1.68
COL1A1-203ENST00000471344 KDM4FA0A1W2PPD8 638 aa25.48■■□□□ 1.67
COL1A1-203ENST00000471344 ABCA9Q8IUA7 1624 aa25.48■■□□□ 1.67
COL1A1-203ENST00000471344 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
COL1A1-203ENST00000471344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
COL1A1-203ENST00000471344 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
COL1A1-203ENST00000471344 ARHGAP35Q9NRY4 1499 aa25.41■■□□□ 1.66
COL1A1-203ENST00000471344 CDK13Q14004 1512 aaKnown RBP25.39■■□□□ 1.66
COL1A1-203ENST00000471344 ADGRL1O94910 1474 aa25.36■■□□□ 1.65
COL1A1-203ENST00000471344 ARAP3Q8WWN8 1544 aa25.32■■□□□ 1.64
COL1A1-203ENST00000471344 TTC37Q6PGP7 1564 aa25.3■■□□□ 1.64
COL1A1-203ENST00000471344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.29■■□□□ 1.64
COL1A1-203ENST00000471344 HECW1Q76N89 1606 aa25.29■■□□□ 1.64
COL1A1-203ENST00000471344 PLEKHD1A6NEE1 506 aa25.28■■□□□ 1.64
COL1A1-203ENST00000471344 FMN1Q68DA7 1419 aa25.28■■□□□ 1.64
COL1A1-203ENST00000471344 NEO1Q92859 1461 aa25.26■■□□□ 1.63
COL1A1-203ENST00000471344 FRMPD1Q5SYB0 1578 aa25.26■■□□□ 1.63
COL1A1-203ENST00000471344 LRRIQ1Q96JM4 1722 aa25.25■■□□□ 1.63
COL1A1-203ENST00000471344 ATP1B4Q9UN42 357 aaPredicted RBP25.24■■□□□ 1.63
COL1A1-203ENST00000471344 RAPGEF3O95398 923 aa25.22■■□□□ 1.63
COL1A1-203ENST00000471344 PHLDB1Q86UU1 1377 aa25.19■■□□□ 1.62
COL1A1-203ENST00000471344 PCF11O94913 1555 aaKnown RBP25.18■■□□□ 1.62
COL1A1-203ENST00000471344 FANCAO15360 1455 aa25.16■■□□□ 1.62
COL1A1-203ENST00000471344 KIF14Q15058 1648 aa25.16■■□□□ 1.62
COL1A1-203ENST00000471344 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
COL1A1-203ENST00000471344 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.62
COL1A1-203ENST00000471344 AKNAQ7Z591 1439 aa25.13■■□□□ 1.61
COL1A1-203ENST00000471344 DENND4BO75064 1496 aaPredicted RBP25.09■■□□□ 1.61
COL1A1-203ENST00000471344 MYO5CQ9NQX4 1742 aa25.08■■□□□ 1.61
COL1A1-203ENST00000471344 PLCH2O75038 1416 aa25.07■■□□□ 1.6
COL1A1-203ENST00000471344 TROQ12816 1431 aaPredicted RBP25.07■■□□□ 1.6
COL1A1-203ENST00000471344 CASKIN1Q8WXD9 1431 aa25.07■■□□□ 1.6
COL1A1-203ENST00000471344 ARHGEF40Q8TER5 1519 aa25.07■■□□□ 1.6
COL1A1-203ENST00000471344 CLIP1P30622 1438 aa25.06■■□□□ 1.6
COL1A1-203ENST00000471344 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
COL1A1-203ENST00000471344 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
COL1A1-203ENST00000471344 CCDC18Q5T9S5 1454 aa25■■□□□ 1.59
COL1A1-203ENST00000471344 FYCO1Q9BQS8 1478 aa25■■□□□ 1.59
COL1A1-203ENST00000471344 ADAMTSL3P82987 1691 aa25■■□□□ 1.59
COL1A1-203ENST00000471344 SIGLEC1Q9BZZ2 1709 aa24.99■■□□□ 1.59
COL1A1-203ENST00000471344 POGZQ7Z3K3 1410 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms