RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
HDLBP-234ENST00000471294 LOC105371045A0A1W2PR82 267 aa19.5■□□□□ 0.71
HDLBP-234ENST00000471294 IQGAP2Q13576 1575 aa19.49■□□□□ 0.71
HDLBP-234ENST00000471294 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
HDLBP-234ENST00000471294 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
HDLBP-234ENST00000471294 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
HDLBP-234ENST00000471294 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
HDLBP-234ENST00000471294 EFCAB5A4FU69 1503 aa19.41■□□□□ 0.7
HDLBP-234ENST00000471294 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
HDLBP-234ENST00000471294 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
HDLBP-234ENST00000471294 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
HDLBP-234ENST00000471294 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
HDLBP-234ENST00000471294 CLIP1P30622 1438 aa19.35■□□□□ 0.69
HDLBP-234ENST00000471294 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
HDLBP-234ENST00000471294 DISP1Q96F81 1524 aa19.31■□□□□ 0.68
HDLBP-234ENST00000471294 ARHGAP35Q9NRY4 1499 aa19.31■□□□□ 0.68
HDLBP-234ENST00000471294 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
HDLBP-234ENST00000471294 PRG4Q92954 1404 aaPredicted RBP19.28■□□□□ 0.68
HDLBP-234ENST00000471294 FMN1Q68DA7 1419 aa19.22■□□□□ 0.67
HDLBP-234ENST00000471294 ARAP1Q96P48 1450 aa19.21■□□□□ 0.67
HDLBP-234ENST00000471294 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
HDLBP-234ENST00000471294 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
HDLBP-234ENST00000471294 VPS8Q8N3P4 1428 aa19.16■□□□□ 0.66
HDLBP-234ENST00000471294 PTPRGP23470 1445 aa19.15■□□□□ 0.66
HDLBP-234ENST00000471294 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
HDLBP-234ENST00000471294 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
HDLBP-234ENST00000471294 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
HDLBP-234ENST00000471294 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
HDLBP-234ENST00000471294 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.64
HDLBP-234ENST00000471294 ABCA8O94911 1581 aa19.07■□□□□ 0.64
HDLBP-234ENST00000471294 UHRF1BP1LA0JNW5 1464 aa19.07■□□□□ 0.64
HDLBP-234ENST00000471294 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
HDLBP-234ENST00000471294 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
HDLBP-234ENST00000471294 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
HDLBP-234ENST00000471294 UACAQ9BZF9 1416 aa19.05■□□□□ 0.64
HDLBP-234ENST00000471294 RAPGEF6Q8TEU7 1601 aa19.04■□□□□ 0.64
HDLBP-234ENST00000471294 MAP3K1Q13233 1512 aa19.02■□□□□ 0.64
HDLBP-234ENST00000471294 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
HDLBP-234ENST00000471294 ABCC2Q92887 1545 aa19.01■□□□□ 0.63
HDLBP-234ENST00000471294 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
HDLBP-234ENST00000471294 PLB1Q6P1J6 1458 aa19.01■□□□□ 0.63
HDLBP-234ENST00000471294 PCF11O94913 1555 aaKnown RBP19.01■□□□□ 0.63
HDLBP-234ENST00000471294 CCDC18Q5T9S5 1454 aa18.99■□□□□ 0.63
HDLBP-234ENST00000471294 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
HDLBP-234ENST00000471294 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
HDLBP-234ENST00000471294 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
HDLBP-234ENST00000471294 ADCY10Q96PN6 1610 aa18.92■□□□□ 0.62
HDLBP-234ENST00000471294 APLP2Q06481 763 aa18.9■□□□□ 0.62
HDLBP-234ENST00000471294 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
HDLBP-234ENST00000471294 ATP10BO94823 1461 aa18.9■□□□□ 0.62
HDLBP-234ENST00000471294 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
HDLBP-234ENST00000471294 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
HDLBP-234ENST00000471294 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
HDLBP-234ENST00000471294 LRRIQ1Q96JM4 1722 aa18.87■□□□□ 0.61
HDLBP-234ENST00000471294 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
HDLBP-234ENST00000471294 ATP1B4Q9UN42 357 aaPredicted RBP18.84■□□□□ 0.61
HDLBP-234ENST00000471294 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
HDLBP-234ENST00000471294 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDLBP-234ENST00000471294 CDK13Q14004 1512 aaKnown RBP18.82■□□□□ 0.6
HDLBP-234ENST00000471294 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
HDLBP-234ENST00000471294 MAPKBP1O60336 1514 aa18.79■□□□□ 0.6
HDLBP-234ENST00000471294 EHBP1L1Q8N3D4 1523 aa18.79■□□□□ 0.6
HDLBP-234ENST00000471294 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
HDLBP-234ENST00000471294 TROQ12816 1431 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-234ENST00000471294 MTUS2Q5JR59 1369 aa18.77■□□□□ 0.6
HDLBP-234ENST00000471294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
HDLBP-234ENST00000471294 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
HDLBP-234ENST00000471294 WDR7Q9Y4E6 1490 aa18.74■□□□□ 0.59
HDLBP-234ENST00000471294 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
HDLBP-234ENST00000471294 ASXL2Q76L83 1435 aa18.73■□□□□ 0.59
HDLBP-234ENST00000471294 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
HDLBP-234ENST00000471294 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
HDLBP-234ENST00000471294 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
HDLBP-234ENST00000471294 KIF14Q15058 1648 aa18.68■□□□□ 0.58
HDLBP-234ENST00000471294 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
HDLBP-234ENST00000471294 ABCC10Q5T3U5 1492 aa18.64■□□□□ 0.57
HDLBP-234ENST00000471294 GLI2P10070 1586 aa18.64■□□□□ 0.57
HDLBP-234ENST00000471294 ABCA9Q8IUA7 1624 aa18.61■□□□□ 0.57
HDLBP-234ENST00000471294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.57
HDLBP-234ENST00000471294 ARAP3Q8WWN8 1544 aa18.6■□□□□ 0.57
HDLBP-234ENST00000471294 MIA2Q96PC5 1412 aa18.58■□□□□ 0.57
HDLBP-234ENST00000471294 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
HDLBP-234ENST00000471294 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
HDLBP-234ENST00000471294 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
HDLBP-234ENST00000471294 DIP2BQ9P265 1576 aa18.56■□□□□ 0.56
HDLBP-234ENST00000471294 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
HDLBP-234ENST00000471294 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
HDLBP-234ENST00000471294 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
HDLBP-234ENST00000471294 PLCH2O75038 1416 aa18.54■□□□□ 0.56
HDLBP-234ENST00000471294 TTC37Q6PGP7 1564 aa18.54■□□□□ 0.56
HDLBP-234ENST00000471294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDLBP-234ENST00000471294 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
HDLBP-234ENST00000471294 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
HDLBP-234ENST00000471294 PREX2Q70Z35 1606 aa18.52■□□□□ 0.56
HDLBP-234ENST00000471294 CDC42BPAQ5VT25 1732 aa18.52■□□□□ 0.56
HDLBP-234ENST00000471294 MAP3K4Q9Y6R4 1608 aa18.52■□□□□ 0.55
HDLBP-234ENST00000471294 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
HDLBP-234ENST00000471294 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
HDLBP-234ENST00000471294 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
HDLBP-234ENST00000471294 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms