RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
DNMT3A-209ENST00000470983 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
DNMT3A-209ENST00000470983 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
DNMT3A-209ENST00000470983 NPM1P06748 294 aaKnown RBP eCLIP25.46■■□□□ 1.67
DNMT3A-209ENST00000470983 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
DNMT3A-209ENST00000470983 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
DNMT3A-209ENST00000470983 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
DNMT3A-209ENST00000470983 KIAA0586Q9BVV6 1533 aa25.36■■□□□ 1.65
DNMT3A-209ENST00000470983 FAM69CQ0P6D2 419 aa25.29■■□□□ 1.64
DNMT3A-209ENST00000470983 PRXQ9BXM0 1461 aa25.28■■□□□ 1.64
DNMT3A-209ENST00000470983 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
DNMT3A-209ENST00000470983 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
DNMT3A-209ENST00000470983 ABCC10Q5T3U5 1492 aa25.23■■□□□ 1.63
DNMT3A-209ENST00000470983 EEA1Q15075 1411 aa25.22■■□□□ 1.63
DNMT3A-209ENST00000470983 FAM9AQ8IZU1 332 aaPredicted RBP25.22■■□□□ 1.63
DNMT3A-209ENST00000470983 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
DNMT3A-209ENST00000470983 MAPKBP1O60336 1514 aa25.21■■□□□ 1.63
DNMT3A-209ENST00000470983 KIF13AQ9H1H9 1805 aa25.15■■□□□ 1.62
DNMT3A-209ENST00000470983 UGGT2Q9NYU1 1516 aa25.1■■□□□ 1.61
DNMT3A-209ENST00000470983 PTPRGP23470 1445 aa25.09■■□□□ 1.61
DNMT3A-209ENST00000470983 CARMIL2Q6F5E8 1435 aa25.09■■□□□ 1.61
DNMT3A-209ENST00000470983 DISP1Q96F81 1524 aa25.08■■□□□ 1.61
DNMT3A-209ENST00000470983 KIAA0556O60303 1618 aa25.05■■□□□ 1.6
DNMT3A-209ENST00000470983 ADCY10Q96PN6 1610 aa25.05■■□□□ 1.6
DNMT3A-209ENST00000470983 DIP2BQ9P265 1576 aa25.05■■□□□ 1.6
DNMT3A-209ENST00000470983 KIF21BO75037 1637 aa25.04■■□□□ 1.6
DNMT3A-209ENST00000470983 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
DNMT3A-209ENST00000470983 TNIKQ9UKE5 1360 aa25.02■■□□□ 1.6
DNMT3A-209ENST00000470983 KDM6BO15054 1643 aa24.96■■□□□ 1.59
DNMT3A-209ENST00000470983 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
DNMT3A-209ENST00000470983 PLB1Q6P1J6 1458 aa24.94■■□□□ 1.58
DNMT3A-209ENST00000470983 ABCC2Q92887 1545 aa24.93■■□□□ 1.58
DNMT3A-209ENST00000470983 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
DNMT3A-209ENST00000470983 UHRF1BP1LA0JNW5 1464 aa24.88■■□□□ 1.57
DNMT3A-209ENST00000470983 SAMD9Q5K651 1589 aa24.86■■□□□ 1.57
DNMT3A-209ENST00000470983 ASXL2Q76L83 1435 aa24.86■■□□□ 1.57
DNMT3A-209ENST00000470983 UACAQ9BZF9 1416 aa24.86■■□□□ 1.57
DNMT3A-209ENST00000470983 KDM4FA0A1W2PPD8 638 aa24.84■■□□□ 1.57
DNMT3A-209ENST00000470983 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
DNMT3A-209ENST00000470983 P3H3Q8IVL6 736 aa24.83■■□□□ 1.57
DNMT3A-209ENST00000470983 GLI2P10070 1586 aa24.81■■□□□ 1.56
DNMT3A-209ENST00000470983 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
DNMT3A-209ENST00000470983 TSPOAP1O95153 1857 aa24.78■■□□□ 1.56
DNMT3A-209ENST00000470983 ABCA8O94911 1581 aa24.76■■□□□ 1.55
DNMT3A-209ENST00000470983 TEX14Q8IWB6 1497 aa24.74■■□□□ 1.55
DNMT3A-209ENST00000470983 ZCCHC11Q5TAX3 1644 aaKnown RBP24.73■■□□□ 1.55
DNMT3A-209ENST00000470983 KDM5BQ9UGL1 1544 aa24.72■■□□□ 1.55
DNMT3A-209ENST00000470983 FHOD3Q2V2M9 1422 aa24.71■■□□□ 1.55
DNMT3A-209ENST00000470983 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
DNMT3A-209ENST00000470983 EPRSP07814 1512 aaKnown RBP24.68■■□□□ 1.54
DNMT3A-209ENST00000470983 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.53
DNMT3A-209ENST00000470983 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
DNMT3A-209ENST00000470983 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
DNMT3A-209ENST00000470983 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.53
DNMT3A-209ENST00000470983 ADGRL1O94910 1474 aa24.58■■□□□ 1.52
DNMT3A-209ENST00000470983 MAP3K4Q9Y6R4 1608 aa24.57■■□□□ 1.52
DNMT3A-209ENST00000470983 PPRC1Q5VV67 1664 aaKnown RBP24.57■■□□□ 1.52
DNMT3A-209ENST00000470983 COL17A1Q9UMD9 1497 aaPredicted RBP24.53■■□□□ 1.52
DNMT3A-209ENST00000470983 ATP10BO94823 1461 aa24.52■■□□□ 1.52
DNMT3A-209ENST00000470983 NUP153P49790 1475 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-209ENST00000470983 CD109Q6YHK3 1445 aa24.51■■□□□ 1.51
DNMT3A-209ENST00000470983 MAGI3Q5TCQ9 1506 aa24.48■■□□□ 1.51
DNMT3A-209ENST00000470983 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
DNMT3A-209ENST00000470983 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
DNMT3A-209ENST00000470983 CLIP1P30622 1438 aa24.43■■□□□ 1.5
DNMT3A-209ENST00000470983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
DNMT3A-209ENST00000470983 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
DNMT3A-209ENST00000470983 HECW1Q76N89 1606 aa24.41■■□□□ 1.5
DNMT3A-209ENST00000470983 PHLDB1Q86UU1 1377 aa24.4■■□□□ 1.5
DNMT3A-209ENST00000470983 CFAP43Q8NDM7 1665 aa24.39■■□□□ 1.49
DNMT3A-209ENST00000470983 CDK13Q14004 1512 aaKnown RBP24.39■■□□□ 1.49
DNMT3A-209ENST00000470983 ILDR1Q86SU0 546 aaPredicted RBP24.38■■□□□ 1.49
DNMT3A-209ENST00000470983 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
DNMT3A-209ENST00000470983 LRRIQ1Q96JM4 1722 aa24.36■■□□□ 1.49
DNMT3A-209ENST00000470983 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
DNMT3A-209ENST00000470983 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
DNMT3A-209ENST00000470983 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
DNMT3A-209ENST00000470983 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
DNMT3A-209ENST00000470983 ABCA9Q8IUA7 1624 aa24.29■■□□□ 1.48
DNMT3A-209ENST00000470983 HECW2Q9P2P5 1572 aa24.27■■□□□ 1.48
DNMT3A-209ENST00000470983 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
DNMT3A-209ENST00000470983 PLEKHD1A6NEE1 506 aa24.25■■□□□ 1.47
DNMT3A-209ENST00000470983 FYCO1Q9BQS8 1478 aa24.22■■□□□ 1.47
DNMT3A-209ENST00000470983 TTC37Q6PGP7 1564 aa24.19■■□□□ 1.46
DNMT3A-209ENST00000470983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.19■■□□□ 1.46
DNMT3A-209ENST00000470983 NEO1Q92859 1461 aa24.19■■□□□ 1.46
DNMT3A-209ENST00000470983 CCDC18Q5T9S5 1454 aa24.17■■□□□ 1.46
DNMT3A-209ENST00000470983 KIF14Q15058 1648 aa24.16■■□□□ 1.46
DNMT3A-209ENST00000470983 TROQ12816 1431 aaPredicted RBP24.12■■□□□ 1.45
DNMT3A-209ENST00000470983 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
DNMT3A-209ENST00000470983 RAPGEF3O95398 923 aa24.11■■□□□ 1.45
DNMT3A-209ENST00000470983 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
DNMT3A-209ENST00000470983 MYO5CQ9NQX4 1742 aa24.07■■□□□ 1.44
DNMT3A-209ENST00000470983 PTPRMP28827 1452 aa24.05■■□□□ 1.44
DNMT3A-209ENST00000470983 CFAP74Q9C0B2 1584 aa24.03■■□□□ 1.44
DNMT3A-209ENST00000470983 FBXO41Q8TF61 875 aa24.02■■□□□ 1.44
DNMT3A-209ENST00000470983 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
DNMT3A-209ENST00000470983 FANCAO15360 1455 aa24.01■■□□□ 1.43
DNMT3A-209ENST00000470983 DENND4BO75064 1496 aaPredicted RBP24■■□□□ 1.43
DNMT3A-209ENST00000470983 PLCH2O75038 1416 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms