RNA–Protein interactions for RNA: ENST00000470494.5

CDH23-210, Transcript of cadherin related 23, humanhuman

TSL 3

Gene CDH23, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-210ENST00000470494 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
CDH23-210ENST00000470494 JPH4Q96JJ6 628 aa28.16■■■□□ 2.1
CDH23-210ENST00000470494 KIAA0586Q9BVV6 1533 aa28.13■■■□□ 2.09
CDH23-210ENST00000470494 TRHP20396 242 aaPredicted RBP28.09■■■□□ 2.09
CDH23-210ENST00000470494 RAPGEF2Q9Y4G8 1499 aa28.06■■■□□ 2.08
CDH23-210ENST00000470494 IQGAP2Q13576 1575 aa28.03■■■□□ 2.08
CDH23-210ENST00000470494 CTTNBP2Q8WZ74 1663 aa27.93■■■□□ 2.06
CDH23-210ENST00000470494 CARMIL2Q6F5E8 1435 aa27.88■■■□□ 2.05
CDH23-210ENST00000470494 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
CDH23-210ENST00000470494 PRXQ9BXM0 1461 aa27.85■■■□□ 2.05
CDH23-210ENST00000470494 ADCY10Q96PN6 1610 aa27.84■■■□□ 2.05
CDH23-210ENST00000470494 UGGT2Q9NYU1 1516 aa27.79■■■□□ 2.04
CDH23-210ENST00000470494 PTPRGP23470 1445 aa27.79■■■□□ 2.04
CDH23-210ENST00000470494 TNIKQ9UKE5 1360 aa27.79■■■□□ 2.04
CDH23-210ENST00000470494 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
CDH23-210ENST00000470494 EEA1Q15075 1411 aa27.76■■■□□ 2.04
CDH23-210ENST00000470494 CSRNP3Q8WYN3 585 aa27.76■■■□□ 2.03
CDH23-210ENST00000470494 KIAA0556O60303 1618 aa27.76■■■□□ 2.03
CDH23-210ENST00000470494 NPM1P06748 294 aaKnown RBP eCLIP27.75■■■□□ 2.03
CDH23-210ENST00000470494 FAM9AQ8IZU1 332 aaPredicted RBP27.74■■■□□ 2.03
CDH23-210ENST00000470494 KIF13AQ9H1H9 1805 aa27.7■■■□□ 2.02
CDH23-210ENST00000470494 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
CDH23-210ENST00000470494 MAPKBP1O60336 1514 aa27.65■■■□□ 2.02
CDH23-210ENST00000470494 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
CDH23-210ENST00000470494 UACAQ9BZF9 1416 aa27.6■■■□□ 2.01
CDH23-210ENST00000470494 ABCC2Q92887 1545 aa27.59■■■□□ 2.01
CDH23-210ENST00000470494 DIP2BQ9P265 1576 aa27.56■■■□□ 2
CDH23-210ENST00000470494 KIF21BO75037 1637 aa27.56■■■□□ 2
CDH23-210ENST00000470494 UHRF1BP1LA0JNW5 1464 aa27.56■■■□□ 2
CDH23-210ENST00000470494 ABCC10Q5T3U5 1492 aa27.55■■■□□ 2
CDH23-210ENST00000470494 FAM69CQ0P6D2 419 aa27.53■■■□□ 2
CDH23-210ENST00000470494 ZCCHC11Q5TAX3 1644 aaKnown RBP27.49■■□□□ 1.99
CDH23-210ENST00000470494 TSPOAP1O95153 1857 aa27.49■■□□□ 1.99
CDH23-210ENST00000470494 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
CDH23-210ENST00000470494 EHMT2Q96KQ7 1210 aa27.48■■□□□ 1.99
CDH23-210ENST00000470494 PLB1Q6P1J6 1458 aa27.48■■□□□ 1.99
CDH23-210ENST00000470494 P3H3Q8IVL6 736 aa27.47■■□□□ 1.99
CDH23-210ENST00000470494 ASXL2Q76L83 1435 aa27.46■■□□□ 1.99
CDH23-210ENST00000470494 SAMD9Q5K651 1589 aa27.46■■□□□ 1.99
CDH23-210ENST00000470494 KDM5BQ9UGL1 1544 aa27.44■■□□□ 1.98
CDH23-210ENST00000470494 ABCA8O94911 1581 aa27.43■■□□□ 1.98
CDH23-210ENST00000470494 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
CDH23-210ENST00000470494 FHOD3Q2V2M9 1422 aa27.31■■□□□ 1.96
CDH23-210ENST00000470494 ARID3CA6NKF2 412 aa27.29■■□□□ 1.96
CDH23-210ENST00000470494 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
CDH23-210ENST00000470494 GLI2P10070 1586 aa27.29■■□□□ 1.96
CDH23-210ENST00000470494 RAPGEF6Q8TEU7 1601 aa27.29■■□□□ 1.96
CDH23-210ENST00000470494 EPRSP07814 1512 aaKnown RBP27.28■■□□□ 1.96
CDH23-210ENST00000470494 WDR7Q9Y4E6 1490 aa27.28■■□□□ 1.96
CDH23-210ENST00000470494 PPRC1Q5VV67 1664 aaKnown RBP27.23■■□□□ 1.95
CDH23-210ENST00000470494 KDM6BO15054 1643 aa27.23■■□□□ 1.95
CDH23-210ENST00000470494 MAP3K4Q9Y6R4 1608 aa27.22■■□□□ 1.95
CDH23-210ENST00000470494 ATP10BO94823 1461 aa27.17■■□□□ 1.94
CDH23-210ENST00000470494 KCNH8Q96L42 1107 aa27.16■■□□□ 1.94
CDH23-210ENST00000470494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
CDH23-210ENST00000470494 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.94
CDH23-210ENST00000470494 CFAP43Q8NDM7 1665 aa27.13■■□□□ 1.93
CDH23-210ENST00000470494 NUP153P49790 1475 aaKnown RBP27.13■■□□□ 1.93
CDH23-210ENST00000470494 TEX14Q8IWB6 1497 aa27.1■■□□□ 1.93
CDH23-210ENST00000470494 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
CDH23-210ENST00000470494 CD109Q6YHK3 1445 aa27.05■■□□□ 1.92
CDH23-210ENST00000470494 FMN1Q68DA7 1419 aa27.02■■□□□ 1.92
CDH23-210ENST00000470494 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
CDH23-210ENST00000470494 HECW1Q76N89 1606 aa27■■□□□ 1.91
CDH23-210ENST00000470494 ABCA9Q8IUA7 1624 aa26.98■■□□□ 1.91
CDH23-210ENST00000470494 CDK13Q14004 1512 aaKnown RBP26.98■■□□□ 1.91
CDH23-210ENST00000470494 MAGI3Q5TCQ9 1506 aa26.97■■□□□ 1.91
CDH23-210ENST00000470494 PLEKHD1A6NEE1 506 aa26.92■■□□□ 1.9
CDH23-210ENST00000470494 COL17A1Q9UMD9 1497 aaPredicted RBP26.91■■□□□ 1.9
CDH23-210ENST00000470494 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
CDH23-210ENST00000470494 CLIP1P30622 1438 aa26.87■■□□□ 1.89
CDH23-210ENST00000470494 PCF11O94913 1555 aaKnown RBP26.87■■□□□ 1.89
CDH23-210ENST00000470494 LRRIQ1Q96JM4 1722 aa26.86■■□□□ 1.89
CDH23-210ENST00000470494 TTC37Q6PGP7 1564 aa26.82■■□□□ 1.88
CDH23-210ENST00000470494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.8■■□□□ 1.88
CDH23-210ENST00000470494 CASKIN1Q8WXD9 1431 aa26.76■■□□□ 1.87
CDH23-210ENST00000470494 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
CDH23-210ENST00000470494 NEO1Q92859 1461 aa26.74■■□□□ 1.87
CDH23-210ENST00000470494 CFAP74Q9C0B2 1584 aa26.74■■□□□ 1.87
CDH23-210ENST00000470494 ARAP3Q8WWN8 1544 aa26.74■■□□□ 1.87
CDH23-210ENST00000470494 KIF14Q15058 1648 aa26.73■■□□□ 1.87
CDH23-210ENST00000470494 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
CDH23-210ENST00000470494 CCDC18Q5T9S5 1454 aa26.72■■□□□ 1.87
CDH23-210ENST00000470494 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
CDH23-210ENST00000470494 MYO5CQ9NQX4 1742 aa26.71■■□□□ 1.87
CDH23-210ENST00000470494 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
CDH23-210ENST00000470494 FANCAO15360 1455 aa26.69■■□□□ 1.86
CDH23-210ENST00000470494 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
CDH23-210ENST00000470494 AKNAQ7Z591 1439 aa26.63■■□□□ 1.85
CDH23-210ENST00000470494 FRMPD1Q5SYB0 1578 aa26.63■■□□□ 1.85
CDH23-210ENST00000470494 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
CDH23-210ENST00000470494 KDM4FA0A1W2PPD8 638 aa26.61■■□□□ 1.85
CDH23-210ENST00000470494 LOC105371045A0A1W2PR82 267 aa26.61■■□□□ 1.85
CDH23-210ENST00000470494 ADGRL1O94910 1474 aa26.61■■□□□ 1.85
CDH23-210ENST00000470494 RICTORQ6R327 1708 aa26.6■■□□□ 1.85
CDH23-210ENST00000470494 PLCH2O75038 1416 aa26.59■■□□□ 1.85
CDH23-210ENST00000470494 DENND4BO75064 1496 aaPredicted RBP26.58■■□□□ 1.85
CDH23-210ENST00000470494 ARHGAP5Q13017 1502 aa26.56■■□□□ 1.84
CDH23-210ENST00000470494 CDC42BPBQ9Y5S2 1711 aa26.52■■□□□ 1.84
CDH23-210ENST00000470494 PREX2Q70Z35 1606 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms