RNA–Protein interactions for RNA: ENST00000470455.5

ATP6V1A-204, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

TSL 2

Gene ATP6V1A, Length 2,266 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-204ENST00000470455 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
ATP6V1A-204ENST00000470455 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
ATP6V1A-204ENST00000470455 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
ATP6V1A-204ENST00000470455 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
ATP6V1A-204ENST00000470455 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
ATP6V1A-204ENST00000470455 CEP170Q5SW79 1584 aa13.17□□□□□ -0.3
ATP6V1A-204ENST00000470455 NUP160Q12769 1436 aa13.16□□□□□ -0.3
ATP6V1A-204ENST00000470455 ARAP1Q96P48 1450 aa13.15□□□□□ -0.3
ATP6V1A-204ENST00000470455 CHD1O14646 1710 aa13.14□□□□□ -0.31
ATP6V1A-204ENST00000470455 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
ATP6V1A-204ENST00000470455 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
ATP6V1A-204ENST00000470455 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
ATP6V1A-204ENST00000470455 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
ATP6V1A-204ENST00000470455 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
ATP6V1A-204ENST00000470455 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
ATP6V1A-204ENST00000470455 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
ATP6V1A-204ENST00000470455 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
ATP6V1A-204ENST00000470455 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
ATP6V1A-204ENST00000470455 DISP1Q96F81 1524 aa13.05□□□□□ -0.32
ATP6V1A-204ENST00000470455 ATP1B4Q9UN42 357 aaPredicted RBP13.05□□□□□ -0.32
ATP6V1A-204ENST00000470455 APLP2Q06481 763 aa13.04□□□□□ -0.32
ATP6V1A-204ENST00000470455 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
ATP6V1A-204ENST00000470455 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.32
ATP6V1A-204ENST00000470455 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
ATP6V1A-204ENST00000470455 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
ATP6V1A-204ENST00000470455 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
ATP6V1A-204ENST00000470455 CLASP1Q7Z460 1538 aa13□□□□□ -0.33
ATP6V1A-204ENST00000470455 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
ATP6V1A-204ENST00000470455 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
ATP6V1A-204ENST00000470455 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
ATP6V1A-204ENST00000470455 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
ATP6V1A-204ENST00000470455 FYCO1Q9BQS8 1478 aa12.94□□□□□ -0.34
ATP6V1A-204ENST00000470455 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
ATP6V1A-204ENST00000470455 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
ATP6V1A-204ENST00000470455 PTPRGP23470 1445 aa12.93□□□□□ -0.34
ATP6V1A-204ENST00000470455 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
ATP6V1A-204ENST00000470455 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
ATP6V1A-204ENST00000470455 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
ATP6V1A-204ENST00000470455 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
ATP6V1A-204ENST00000470455 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
ATP6V1A-204ENST00000470455 RAPGEF6Q8TEU7 1601 aa12.87□□□□□ -0.35
ATP6V1A-204ENST00000470455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
ATP6V1A-204ENST00000470455 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
ATP6V1A-204ENST00000470455 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
ATP6V1A-204ENST00000470455 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
ATP6V1A-204ENST00000470455 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
ATP6V1A-204ENST00000470455 LRRC9Q6ZRR7 1453 aa12.86□□□□□ -0.35
ATP6V1A-204ENST00000470455 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
ATP6V1A-204ENST00000470455 ABCA8O94911 1581 aa12.84□□□□□ -0.35
ATP6V1A-204ENST00000470455 CDK13Q14004 1512 aaKnown RBP12.84□□□□□ -0.35
ATP6V1A-204ENST00000470455 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
ATP6V1A-204ENST00000470455 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
ATP6V1A-204ENST00000470455 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
ATP6V1A-204ENST00000470455 MTUS2Q5JR59 1369 aa12.83□□□□□ -0.36
ATP6V1A-204ENST00000470455 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
ATP6V1A-204ENST00000470455 ATP10BO94823 1461 aa12.79□□□□□ -0.36
ATP6V1A-204ENST00000470455 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
ATP6V1A-204ENST00000470455 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
ATP6V1A-204ENST00000470455 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
ATP6V1A-204ENST00000470455 ARHGEF11O15085 1522 aa12.76□□□□□ -0.37
ATP6V1A-204ENST00000470455 PHLDB1Q86UU1 1377 aa12.76□□□□□ -0.37
ATP6V1A-204ENST00000470455 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
ATP6V1A-204ENST00000470455 UHRF1BP1LA0JNW5 1464 aa12.75□□□□□ -0.37
ATP6V1A-204ENST00000470455 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
ATP6V1A-204ENST00000470455 NCOA2Q15596 1464 aa12.73□□□□□ -0.37
ATP6V1A-204ENST00000470455 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
ATP6V1A-204ENST00000470455 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.38
ATP6V1A-204ENST00000470455 SUPT6HQ7KZ85 1726 aaKnown RBP12.7□□□□□ -0.38
ATP6V1A-204ENST00000470455 RIMBP3CA6NJZ7 1639 aa12.7□□□□□ -0.38
ATP6V1A-204ENST00000470455 RIMBP3BA6NNM3 1639 aa12.7□□□□□ -0.38
ATP6V1A-204ENST00000470455 RIMBP3Q9UFD9 1639 aa12.7□□□□□ -0.38
ATP6V1A-204ENST00000470455 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
ATP6V1A-204ENST00000470455 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
ATP6V1A-204ENST00000470455 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
ATP6V1A-204ENST00000470455 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
ATP6V1A-204ENST00000470455 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATP6V1A-204ENST00000470455 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
ATP6V1A-204ENST00000470455 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
ATP6V1A-204ENST00000470455 MYOM3Q5VTT5 1437 aa12.67□□□□□ -0.38
ATP6V1A-204ENST00000470455 ITGAEP38570 1179 aa12.66□□□□□ -0.38
ATP6V1A-204ENST00000470455 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.38
ATP6V1A-204ENST00000470455 KIF14Q15058 1648 aa12.65□□□□□ -0.38
ATP6V1A-204ENST00000470455 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
ATP6V1A-204ENST00000470455 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
ATP6V1A-204ENST00000470455 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
ATP6V1A-204ENST00000470455 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
ATP6V1A-204ENST00000470455 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
ATP6V1A-204ENST00000470455 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
ATP6V1A-204ENST00000470455 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
ATP6V1A-204ENST00000470455 WDR7Q9Y4E6 1490 aa12.6□□□□□ -0.39
ATP6V1A-204ENST00000470455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATP6V1A-204ENST00000470455 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.4
ATP6V1A-204ENST00000470455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.58□□□□□ -0.4
ATP6V1A-204ENST00000470455 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
ATP6V1A-204ENST00000470455 TTC37Q6PGP7 1564 aa12.55□□□□□ -0.4
ATP6V1A-204ENST00000470455 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
ATP6V1A-204ENST00000470455 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
ATP6V1A-204ENST00000470455 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
ATP6V1A-204ENST00000470455 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
ATP6V1A-204ENST00000470455 CHIC2Q9UKJ5 165 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms