RNA–Protein interactions for RNA: ENST00000470005.1

CHL1-210, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-210ENST00000470005 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
CHL1-210ENST00000470005 MIER1Q8N108 512 aa12.59□□□□□ -0.39
CHL1-210ENST00000470005 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
CHL1-210ENST00000470005 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
CHL1-210ENST00000470005 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
CHL1-210ENST00000470005 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
CHL1-210ENST00000470005 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
CHL1-210ENST00000470005 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
CHL1-210ENST00000470005 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
CHL1-210ENST00000470005 EVX2Q03828 476 aa12.52□□□□□ -0.41
CHL1-210ENST00000470005 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHL1-210ENST00000470005 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
CHL1-210ENST00000470005 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
CHL1-210ENST00000470005 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
CHL1-210ENST00000470005 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
CHL1-210ENST00000470005 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
CHL1-210ENST00000470005 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
CHL1-210ENST00000470005 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
CHL1-210ENST00000470005 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
CHL1-210ENST00000470005 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
CHL1-210ENST00000470005 EEA1Q15075 1411 aa12.37□□□□□ -0.43
CHL1-210ENST00000470005 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
CHL1-210ENST00000470005 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
CHL1-210ENST00000470005 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
CHL1-210ENST00000470005 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
CHL1-210ENST00000470005 WRNQ14191 1432 aaPredicted RBP eCLIP12.31□□□□□ -0.44
CHL1-210ENST00000470005 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
CHL1-210ENST00000470005 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
CHL1-210ENST00000470005 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
CHL1-210ENST00000470005 NUBP1P53384 320 aa12.28□□□□□ -0.44
CHL1-210ENST00000470005 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
CHL1-210ENST00000470005 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
CHL1-210ENST00000470005 GABBR2O75899 941 aa12.27□□□□□ -0.45
CHL1-210ENST00000470005 TRIM26Q12899 539 aaPredicted RBP12.27□□□□□ -0.45
CHL1-210ENST00000470005 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
CHL1-210ENST00000470005 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
CHL1-210ENST00000470005 CLCN6P51797 869 aa12.24□□□□□ -0.45
CHL1-210ENST00000470005 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
CHL1-210ENST00000470005 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
CHL1-210ENST00000470005 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
CHL1-210ENST00000470005 HRCP23327 699 aa12.18□□□□□ -0.46
CHL1-210ENST00000470005 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
CHL1-210ENST00000470005 SOGA1O94964 1423 aa12.18□□□□□ -0.46
CHL1-210ENST00000470005 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
CHL1-210ENST00000470005 GOLGA3Q08378 1498 aa12.15□□□□□ -0.46
CHL1-210ENST00000470005 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
CHL1-210ENST00000470005 CFTRP13569 1480 aa12.14□□□□□ -0.47
CHL1-210ENST00000470005 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
CHL1-210ENST00000470005 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
CHL1-210ENST00000470005 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
CHL1-210ENST00000470005 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
CHL1-210ENST00000470005 UBTFP17480 764 aaKnown RBP12.1□□□□□ -0.47
CHL1-210ENST00000470005 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
CHL1-210ENST00000470005 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
CHL1-210ENST00000470005 GSE1Q14687 1217 aa12.08□□□□□ -0.48
CHL1-210ENST00000470005 CEP162Q5TB80 1403 aa12.08□□□□□ -0.48
CHL1-210ENST00000470005 KIF21BO75037 1637 aa12.08□□□□□ -0.48
CHL1-210ENST00000470005 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
CHL1-210ENST00000470005 RUSC2Q8N2Y8 1516 aa12.07□□□□□ -0.48
CHL1-210ENST00000470005 MAP3K13O43283 966 aa12.06□□□□□ -0.48
CHL1-210ENST00000470005 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
CHL1-210ENST00000470005 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
CHL1-210ENST00000470005 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
CHL1-210ENST00000470005 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
CHL1-210ENST00000470005 PYGBP11216 843 aa12.02□□□□□ -0.49
CHL1-210ENST00000470005 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
CHL1-210ENST00000470005 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
CHL1-210ENST00000470005 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
CHL1-210ENST00000470005 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
CHL1-210ENST00000470005 CUX1P39880 1505 aa12□□□□□ -0.49
CHL1-210ENST00000470005 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
CHL1-210ENST00000470005 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
CHL1-210ENST00000470005 ERICH3Q5RHP9 1530 aa11.97□□□□□ -0.49
CHL1-210ENST00000470005 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
CHL1-210ENST00000470005 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
CHL1-210ENST00000470005 CLIP1P30622 1438 aa11.94□□□□□ -0.5
CHL1-210ENST00000470005 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
CHL1-210ENST00000470005 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
CHL1-210ENST00000470005 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
CHL1-210ENST00000470005 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
CHL1-210ENST00000470005 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
CHL1-210ENST00000470005 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
CHL1-210ENST00000470005 ATMINO43313 823 aaPredicted RBP11.88□□□□□ -0.51
CHL1-210ENST00000470005 TIE1P35590 1138 aa11.88□□□□□ -0.51
CHL1-210ENST00000470005 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
CHL1-210ENST00000470005 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
CHL1-210ENST00000470005 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
CHL1-210ENST00000470005 CUX2O14529 1486 aa11.86□□□□□ -0.51
CHL1-210ENST00000470005 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
CHL1-210ENST00000470005 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
CHL1-210ENST00000470005 ZNF467Q7Z7K2 595 aaPredicted RBP11.85□□□□□ -0.51
CHL1-210ENST00000470005 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
CHL1-210ENST00000470005 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
CHL1-210ENST00000470005 PPARGC1BQ86YN6 1023 aaKnown RBP11.84□□□□□ -0.51
CHL1-210ENST00000470005 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
CHL1-210ENST00000470005 IGF1RP08069 1367 aa11.83□□□□□ -0.52
CHL1-210ENST00000470005 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
CHL1-210ENST00000470005 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
CHL1-210ENST00000470005 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
CHL1-210ENST00000470005 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms