RNA–Protein interactions for RNA: ENST00000470005.1

CHL1-210, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-210ENST00000470005 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
CHL1-210ENST00000470005 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
CHL1-210ENST00000470005 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
CHL1-210ENST00000470005 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
CHL1-210ENST00000470005 FOXD1Q16676 465 aa19.13■□□□□ 0.65
CHL1-210ENST00000470005 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
CHL1-210ENST00000470005 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
CHL1-210ENST00000470005 ADRA2BP18089 450 aa18.18■□□□□ 0.5
CHL1-210ENST00000470005 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
CHL1-210ENST00000470005 MSH5O43196 834 aa17.73■□□□□ 0.43
CHL1-210ENST00000470005 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
CHL1-210ENST00000470005 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
CHL1-210ENST00000470005 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
CHL1-210ENST00000470005 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CHL1-210ENST00000470005 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
CHL1-210ENST00000470005 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
CHL1-210ENST00000470005 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
CHL1-210ENST00000470005 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
CHL1-210ENST00000470005 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
CHL1-210ENST00000470005 KCNA4P22459 653 aa15.94■□□□□ 0.14
CHL1-210ENST00000470005 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
CHL1-210ENST00000470005 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
CHL1-210ENST00000470005 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
CHL1-210ENST00000470005 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
CHL1-210ENST00000470005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHL1-210ENST00000470005 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
CHL1-210ENST00000470005 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
CHL1-210ENST00000470005 SLC4A2P04920 1241 aa15.05■□□□□ -0
CHL1-210ENST00000470005 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
CHL1-210ENST00000470005 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
CHL1-210ENST00000470005 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
CHL1-210ENST00000470005 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
CHL1-210ENST00000470005 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
CHL1-210ENST00000470005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
CHL1-210ENST00000470005 ZBTB22O15209 634 aa14.65□□□□□ -0.06
CHL1-210ENST00000470005 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
CHL1-210ENST00000470005 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CHL1-210ENST00000470005 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
CHL1-210ENST00000470005 APLP2Q06481 763 aa14.55□□□□□ -0.08
CHL1-210ENST00000470005 CAPN15O75808 1086 aa14.54□□□□□ -0.08
CHL1-210ENST00000470005 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
CHL1-210ENST00000470005 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
CHL1-210ENST00000470005 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
CHL1-210ENST00000470005 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
CHL1-210ENST00000470005 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
CHL1-210ENST00000470005 DSG3P32926 999 aa14.36□□□□□ -0.11
CHL1-210ENST00000470005 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
CHL1-210ENST00000470005 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
CHL1-210ENST00000470005 ABCB7O75027 752 aa14.23□□□□□ -0.13
CHL1-210ENST00000470005 POLA2Q14181 598 aa14.13□□□□□ -0.15
CHL1-210ENST00000470005 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
CHL1-210ENST00000470005 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
CHL1-210ENST00000470005 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
CHL1-210ENST00000470005 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
CHL1-210ENST00000470005 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
CHL1-210ENST00000470005 FBLN2P98095 1184 aa13.7□□□□□ -0.22
CHL1-210ENST00000470005 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
CHL1-210ENST00000470005 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
CHL1-210ENST00000470005 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
CHL1-210ENST00000470005 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
CHL1-210ENST00000470005 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
CHL1-210ENST00000470005 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
CHL1-210ENST00000470005 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
CHL1-210ENST00000470005 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
CHL1-210ENST00000470005 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
CHL1-210ENST00000470005 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
CHL1-210ENST00000470005 NACADO15069 1562 aa13.39□□□□□ -0.27
CHL1-210ENST00000470005 ABCC9O60706 1549 aa13.34□□□□□ -0.27
CHL1-210ENST00000470005 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
CHL1-210ENST00000470005 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
CHL1-210ENST00000470005 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
CHL1-210ENST00000470005 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
CHL1-210ENST00000470005 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
CHL1-210ENST00000470005 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHL1-210ENST00000470005 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
CHL1-210ENST00000470005 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
CHL1-210ENST00000470005 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
CHL1-210ENST00000470005 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
CHL1-210ENST00000470005 POTEHQ6S545 545 aa13.08□□□□□ -0.32
CHL1-210ENST00000470005 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
CHL1-210ENST00000470005 FKBP8Q14318 412 aa13.01□□□□□ -0.33
CHL1-210ENST00000470005 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHL1-210ENST00000470005 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
CHL1-210ENST00000470005 PROM2Q8N271 834 aa12.97□□□□□ -0.33
CHL1-210ENST00000470005 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
CHL1-210ENST00000470005 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
CHL1-210ENST00000470005 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
CHL1-210ENST00000470005 CECR2Q9BXF3 1484 aa12.87□□□□□ -0.35
CHL1-210ENST00000470005 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
CHL1-210ENST00000470005 MROH2BQ7Z745 1585 aa12.84□□□□□ -0.35
CHL1-210ENST00000470005 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
CHL1-210ENST00000470005 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
CHL1-210ENST00000470005 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.37
CHL1-210ENST00000470005 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
CHL1-210ENST00000470005 WIZO95785 1651 aa12.7□□□□□ -0.38
CHL1-210ENST00000470005 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
CHL1-210ENST00000470005 TRIM41Q8WV44 630 aa12.68□□□□□ -0.38
CHL1-210ENST00000470005 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
CHL1-210ENST00000470005 HAX1O00165 279 aa12.65□□□□□ -0.38
CHL1-210ENST00000470005 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms