RNA–Protein interactions for RNA: ENST00000469941.5

PCNP-204, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene PCNP, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-204ENST00000469941 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
PCNP-204ENST00000469941 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
PCNP-204ENST00000469941 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
PCNP-204ENST00000469941 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
PCNP-204ENST00000469941 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
PCNP-204ENST00000469941 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
PCNP-204ENST00000469941 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
PCNP-204ENST00000469941 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
PCNP-204ENST00000469941 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
PCNP-204ENST00000469941 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
PCNP-204ENST00000469941 IQGAP2Q13576 1575 aa18.78■□□□□ 0.6
PCNP-204ENST00000469941 DISP1Q96F81 1524 aa18.74■□□□□ 0.59
PCNP-204ENST00000469941 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
PCNP-204ENST00000469941 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
PCNP-204ENST00000469941 ADCY10Q96PN6 1610 aa18.68■□□□□ 0.58
PCNP-204ENST00000469941 PTPRGP23470 1445 aa18.68■□□□□ 0.58
PCNP-204ENST00000469941 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
PCNP-204ENST00000469941 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
PCNP-204ENST00000469941 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
PCNP-204ENST00000469941 EEA1Q15075 1411 aa18.63■□□□□ 0.57
PCNP-204ENST00000469941 KIAA0556O60303 1618 aa18.62■□□□□ 0.57
PCNP-204ENST00000469941 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
PCNP-204ENST00000469941 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
PCNP-204ENST00000469941 KIF13AQ9H1H9 1805 aa18.56■□□□□ 0.56
PCNP-204ENST00000469941 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
PCNP-204ENST00000469941 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
PCNP-204ENST00000469941 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
PCNP-204ENST00000469941 KIF21BO75037 1637 aa18.53■□□□□ 0.56
PCNP-204ENST00000469941 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
PCNP-204ENST00000469941 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
PCNP-204ENST00000469941 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
PCNP-204ENST00000469941 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
PCNP-204ENST00000469941 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
PCNP-204ENST00000469941 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
PCNP-204ENST00000469941 ABCC10Q5T3U5 1492 aa18.47■□□□□ 0.55
PCNP-204ENST00000469941 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
PCNP-204ENST00000469941 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
PCNP-204ENST00000469941 DIP2BQ9P265 1576 aa18.44■□□□□ 0.54
PCNP-204ENST00000469941 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
PCNP-204ENST00000469941 ASXL2Q76L83 1435 aa18.43■□□□□ 0.54
PCNP-204ENST00000469941 ABCA8O94911 1581 aa18.43■□□□□ 0.54
PCNP-204ENST00000469941 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
PCNP-204ENST00000469941 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
PCNP-204ENST00000469941 TSPOAP1O95153 1857 aa18.4■□□□□ 0.54
PCNP-204ENST00000469941 ATP10BO94823 1461 aa18.33■□□□□ 0.52
PCNP-204ENST00000469941 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
PCNP-204ENST00000469941 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
PCNP-204ENST00000469941 EPRSP07814 1512 aaKnown RBP18.31■□□□□ 0.52
PCNP-204ENST00000469941 RAPGEF6Q8TEU7 1601 aa18.3■□□□□ 0.52
PCNP-204ENST00000469941 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
PCNP-204ENST00000469941 PPRC1Q5VV67 1664 aaKnown RBP18.28■□□□□ 0.52
PCNP-204ENST00000469941 WDR7Q9Y4E6 1490 aa18.28■□□□□ 0.52
PCNP-204ENST00000469941 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.52
PCNP-204ENST00000469941 GLI2P10070 1586 aa18.26■□□□□ 0.51
PCNP-204ENST00000469941 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
PCNP-204ENST00000469941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
PCNP-204ENST00000469941 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
PCNP-204ENST00000469941 MAP3K4Q9Y6R4 1608 aa18.23■□□□□ 0.51
PCNP-204ENST00000469941 COL17A1Q9UMD9 1497 aaPredicted RBP18.2■□□□□ 0.5
PCNP-204ENST00000469941 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
PCNP-204ENST00000469941 CDK13Q14004 1512 aaKnown RBP18.18■□□□□ 0.5
PCNP-204ENST00000469941 LRRIQ1Q96JM4 1722 aa18.16■□□□□ 0.5
PCNP-204ENST00000469941 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
PCNP-204ENST00000469941 KDM6BO15054 1643 aa18.15■□□□□ 0.5
PCNP-204ENST00000469941 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
PCNP-204ENST00000469941 CLIP1P30622 1438 aa18.12■□□□□ 0.49
PCNP-204ENST00000469941 CFAP43Q8NDM7 1665 aa18.11■□□□□ 0.49
PCNP-204ENST00000469941 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
PCNP-204ENST00000469941 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
PCNP-204ENST00000469941 MAGI3Q5TCQ9 1506 aa18.07■□□□□ 0.48
PCNP-204ENST00000469941 PCF11O94913 1555 aaKnown RBP18.06■□□□□ 0.48
PCNP-204ENST00000469941 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
PCNP-204ENST00000469941 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
PCNP-204ENST00000469941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.04■□□□□ 0.483e-6■□□□□ 8.5
PCNP-204ENST00000469941 CEP162Q5TB80 1403 aa18.03■□□□□ 0.48
PCNP-204ENST00000469941 TTC37Q6PGP7 1564 aa18.02■□□□□ 0.48
PCNP-204ENST00000469941 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.47
PCNP-204ENST00000469941 KIF14Q15058 1648 aa18■□□□□ 0.47
PCNP-204ENST00000469941 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
PCNP-204ENST00000469941 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
PCNP-204ENST00000469941 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
PCNP-204ENST00000469941 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
PCNP-204ENST00000469941 KDM4FA0A1W2PPD8 638 aa17.93■□□□□ 0.46
PCNP-204ENST00000469941 CDK11AQ9UQ88 783 aaPredicted RBP17.93■□□□□ 0.46
PCNP-204ENST00000469941 FANCAO15360 1455 aa17.91■□□□□ 0.46
PCNP-204ENST00000469941 PLCH2O75038 1416 aa17.9■□□□□ 0.46
PCNP-204ENST00000469941 NEO1Q92859 1461 aa17.9■□□□□ 0.46
PCNP-204ENST00000469941 AKNAQ7Z591 1439 aa17.89■□□□□ 0.45
PCNP-204ENST00000469941 CCDC18Q5T9S5 1454 aa17.89■□□□□ 0.45
PCNP-204ENST00000469941 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
PCNP-204ENST00000469941 MYO5CQ9NQX4 1742 aa17.86■□□□□ 0.45
PCNP-204ENST00000469941 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
PCNP-204ENST00000469941 RICTORQ6R327 1708 aa17.84■□□□□ 0.45
PCNP-204ENST00000469941 PHLDB1Q86UU1 1377 aa17.84■□□□□ 0.45
PCNP-204ENST00000469941 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.45
PCNP-204ENST00000469941 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
PCNP-204ENST00000469941 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
PCNP-204ENST00000469941 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
PCNP-204ENST00000469941 DENND4BO75064 1496 aaPredicted RBP17.8■□□□□ 0.44
PCNP-204ENST00000469941 ADGRL1O94910 1474 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms