RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 JPH4Q96JJ6 628 aa29.92■■■□□ 2.38
MRPL28-208ENST00000469744 CARMIL1Q5VZK9 1371 aa29.91■■■□□ 2.38
MRPL28-208ENST00000469744 TRHP20396 242 aaPredicted RBP29.91■■■□□ 2.38
MRPL28-208ENST00000469744 KIAA0586Q9BVV6 1533 aa29.84■■■□□ 2.37
MRPL28-208ENST00000469744 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
MRPL28-208ENST00000469744 IQGAP2Q13576 1575 aa29.67■■■□□ 2.34
MRPL28-208ENST00000469744 ADCY10Q96PN6 1610 aa29.57■■■□□ 2.32
MRPL28-208ENST00000469744 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
MRPL28-208ENST00000469744 CARMIL2Q6F5E8 1435 aa29.53■■■□□ 2.32
MRPL28-208ENST00000469744 PTPRGP23470 1445 aa29.5■■■□□ 2.31
MRPL28-208ENST00000469744 CTTNBP2Q8WZ74 1663 aa29.5■■■□□ 2.31
MRPL28-208ENST00000469744 PRXQ9BXM0 1461 aa29.49■■■□□ 2.31
MRPL28-208ENST00000469744 DISP1Q96F81 1524 aa29.49■■■□□ 2.31
MRPL28-208ENST00000469744 TNIKQ9UKE5 1360 aa29.47■■■□□ 2.31
MRPL28-208ENST00000469744 UGGT2Q9NYU1 1516 aa29.46■■■□□ 2.31
MRPL28-208ENST00000469744 KIF13AQ9H1H9 1805 aa29.45■■■□□ 2.3
MRPL28-208ENST00000469744 NPM1P06748 294 aaKnown RBP eCLIP29.43■■■□□ 2.3
MRPL28-208ENST00000469744 KIAA0556O60303 1618 aa29.4■■■□□ 2.3
MRPL28-208ENST00000469744 MAPKBP1O60336 1514 aa29.39■■■□□ 2.29
MRPL28-208ENST00000469744 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
MRPL28-208ENST00000469744 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
MRPL28-208ENST00000469744 FAM9AQ8IZU1 332 aaPredicted RBP29.29■■■□□ 2.28
MRPL28-208ENST00000469744 DIP2BQ9P265 1576 aa29.29■■■□□ 2.28
MRPL28-208ENST00000469744 ABCC2Q92887 1545 aa29.29■■■□□ 2.28
MRPL28-208ENST00000469744 UACAQ9BZF9 1416 aa29.29■■■□□ 2.28
MRPL28-208ENST00000469744 FAM69CQ0P6D2 419 aa29.29■■■□□ 2.28
MRPL28-208ENST00000469744 EEA1Q15075 1411 aa29.28■■■□□ 2.28
MRPL28-208ENST00000469744 UHRF1BP1LA0JNW5 1464 aa29.25■■■□□ 2.27
MRPL28-208ENST00000469744 GOLGA3Q08378 1498 aa29.24■■■□□ 2.27
MRPL28-208ENST00000469744 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
MRPL28-208ENST00000469744 ASXL2Q76L83 1435 aa29.17■■■□□ 2.26
MRPL28-208ENST00000469744 PLB1Q6P1J6 1458 aa29.16■■■□□ 2.26
MRPL28-208ENST00000469744 ZCCHC11Q5TAX3 1644 aaKnown RBP29.15■■■□□ 2.26
MRPL28-208ENST00000469744 TSPOAP1O95153 1857 aa29.14■■■□□ 2.26
MRPL28-208ENST00000469744 KDM5BQ9UGL1 1544 aa29.14■■■□□ 2.26
MRPL28-208ENST00000469744 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
MRPL28-208ENST00000469744 KIF21BO75037 1637 aa29.09■■■□□ 2.25
MRPL28-208ENST00000469744 ABCA8O94911 1581 aa29.09■■■□□ 2.25
MRPL28-208ENST00000469744 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
MRPL28-208ENST00000469744 SAMD9Q5K651 1589 aa29.06■■■□□ 2.24
MRPL28-208ENST00000469744 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
MRPL28-208ENST00000469744 GLI2P10070 1586 aa29■■■□□ 2.23
MRPL28-208ENST00000469744 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
MRPL28-208ENST00000469744 PPRC1Q5VV67 1664 aaKnown RBP28.95■■■□□ 2.23
MRPL28-208ENST00000469744 ARID3CA6NKF2 412 aa28.95■■■□□ 2.22
MRPL28-208ENST00000469744 WDR7Q9Y4E6 1490 aa28.95■■■□□ 2.22
MRPL28-208ENST00000469744 KDM6BO15054 1643 aa28.93■■■□□ 2.22
MRPL28-208ENST00000469744 FHOD3Q2V2M9 1422 aa28.91■■■□□ 2.22
MRPL28-208ENST00000469744 MAP3K4Q9Y6R4 1608 aa28.91■■■□□ 2.22
MRPL28-208ENST00000469744 RAPGEF6Q8TEU7 1601 aa28.88■■■□□ 2.21
MRPL28-208ENST00000469744 UBTFP17480 764 aaKnown RBP28.85■■■□□ 2.21
MRPL28-208ENST00000469744 ATP10BO94823 1461 aa28.84■■■□□ 2.21
MRPL28-208ENST00000469744 KCNH8Q96L42 1107 aa28.84■■■□□ 2.21
MRPL28-208ENST00000469744 EFCAB5A4FU69 1503 aa28.82■■■□□ 2.2
MRPL28-208ENST00000469744 NUP153P49790 1475 aaKnown RBP28.77■■■□□ 2.2
MRPL28-208ENST00000469744 CFAP43Q8NDM7 1665 aa28.75■■■□□ 2.19
MRPL28-208ENST00000469744 TEX14Q8IWB6 1497 aa28.74■■■□□ 2.19
MRPL28-208ENST00000469744 CD109Q6YHK3 1445 aa28.72■■■□□ 2.19
MRPL28-208ENST00000469744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
MRPL28-208ENST00000469744 HNRNPUL2Q1KMD3 747 aaKnown RBP28.72■■■□□ 2.19
MRPL28-208ENST00000469744 COL17A1Q9UMD9 1497 aaPredicted RBP28.7■■■□□ 2.18
MRPL28-208ENST00000469744 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
MRPL28-208ENST00000469744 AEBP2Q6ZN18 517 aaPredicted RBP28.66■■■□□ 2.18
MRPL28-208ENST00000469744 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
MRPL28-208ENST00000469744 ABCA9Q8IUA7 1624 aa28.61■■■□□ 2.17
MRPL28-208ENST00000469744 CDK13Q14004 1512 aaKnown RBP28.58■■■□□ 2.17
MRPL28-208ENST00000469744 FMN1Q68DA7 1419 aa28.55■■■□□ 2.16
MRPL28-208ENST00000469744 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
MRPL28-208ENST00000469744 PLEKHD1A6NEE1 506 aa28.52■■■□□ 2.16
MRPL28-208ENST00000469744 HECW1Q76N89 1606 aa28.51■■■□□ 2.15
MRPL28-208ENST00000469744 KDM4FA0A1W2PPD8 638 aa28.43■■■□□ 2.14
MRPL28-208ENST00000469744 LRRIQ1Q96JM4 1722 aa28.43■■■□□ 2.14
MRPL28-208ENST00000469744 TTC37Q6PGP7 1564 aa28.42■■■□□ 2.14
MRPL28-208ENST00000469744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.14
MRPL28-208ENST00000469744 ARAP3Q8WWN8 1544 aa28.42■■■□□ 2.14
MRPL28-208ENST00000469744 PCF11O94913 1555 aaKnown RBP28.39■■■□□ 2.14
MRPL28-208ENST00000469744 NEO1Q92859 1461 aa28.37■■■□□ 2.13
MRPL28-208ENST00000469744 CLIP1P30622 1438 aa28.36■■■□□ 2.13
MRPL28-208ENST00000469744 PHLDB1Q86UU1 1377 aa28.33■■■□□ 2.13
MRPL28-208ENST00000469744 ADGRL1O94910 1474 aa28.33■■■□□ 2.13
MRPL28-208ENST00000469744 RAPGEF3O95398 923 aa28.32■■■□□ 2.12
MRPL28-208ENST00000469744 KIF14Q15058 1648 aa28.3■■■□□ 2.12
MRPL28-208ENST00000469744 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
MRPL28-208ENST00000469744 FANCAO15360 1455 aa28.3■■■□□ 2.12
MRPL28-208ENST00000469744 FRMPD1Q5SYB0 1578 aa28.29■■■□□ 2.12
MRPL28-208ENST00000469744 CDK11AQ9UQ88 783 aaPredicted RBP28.27■■■□□ 2.12
MRPL28-208ENST00000469744 CFAP74Q9C0B2 1584 aa28.27■■■□□ 2.12
MRPL28-208ENST00000469744 TROQ12816 1431 aaPredicted RBP28.25■■■□□ 2.11
MRPL28-208ENST00000469744 AKNAQ7Z591 1439 aa28.25■■■□□ 2.11
MRPL28-208ENST00000469744 FYCO1Q9BQS8 1478 aa28.23■■■□□ 2.11
MRPL28-208ENST00000469744 MYO5CQ9NQX4 1742 aa28.23■■■□□ 2.11
MRPL28-208ENST00000469744 CCDC18Q5T9S5 1454 aa28.22■■■□□ 2.11
MRPL28-208ENST00000469744 RICTORQ6R327 1708 aa28.21■■■□□ 2.11
MRPL28-208ENST00000469744 DENND4BO75064 1496 aaPredicted RBP28.2■■■□□ 2.1
MRPL28-208ENST00000469744 PLCH2O75038 1416 aa28.2■■■□□ 2.1
MRPL28-208ENST00000469744 CEP162Q5TB80 1403 aa28.16■■■□□ 2.1
MRPL28-208ENST00000469744 ARHGAP5Q13017 1502 aa28.11■■■□□ 2.09
MRPL28-208ENST00000469744 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
MRPL28-208ENST00000469744 ARHGEF40Q8TER5 1519 aa28.1■■■□□ 2.09
MRPL28-208ENST00000469744 SCAPERQ9BY12 1400 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms