RNA–Protein interactions for RNA: ENST00000469491.5

FNDC3B-207, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 2

Gene FNDC3B, Length 2,916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-207ENST00000469491 ATP1B4Q9UN42 357 aaPredicted RBP25.98■■□□□ 1.75
FNDC3B-207ENST00000469491 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
FNDC3B-207ENST00000469491 FHOD3Q2V2M9 1422 aa25.92■■□□□ 1.74
FNDC3B-207ENST00000469491 ZEB1P37275 1124 aaPredicted RBP25.9■■□□□ 1.74
FNDC3B-207ENST00000469491 WDR62O43379 1518 aa25.88■■□□□ 1.73
FNDC3B-207ENST00000469491 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
FNDC3B-207ENST00000469491 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
FNDC3B-207ENST00000469491 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
FNDC3B-207ENST00000469491 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
FNDC3B-207ENST00000469491 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
FNDC3B-207ENST00000469491 PCF11O94913 1555 aaKnown RBP25.74■■□□□ 1.71
FNDC3B-207ENST00000469491 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
FNDC3B-207ENST00000469491 ITGAEP38570 1179 aa25.7■■□□□ 1.71
FNDC3B-207ENST00000469491 EFCAB5A4FU69 1503 aa25.7■■□□□ 1.7
FNDC3B-207ENST00000469491 ADAMTS12P58397 1594 aa25.7■■□□□ 1.7
FNDC3B-207ENST00000469491 TIAM1Q13009 1591 aa25.7■■□□□ 1.7
FNDC3B-207ENST00000469491 FBLN2P98095 1184 aa25.68■■□□□ 1.7
FNDC3B-207ENST00000469491 EIF4G3O43432 1585 aaKnown RBP25.67■■□□□ 1.7
FNDC3B-207ENST00000469491 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
FNDC3B-207ENST00000469491 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
FNDC3B-207ENST00000469491 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
FNDC3B-207ENST00000469491 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
FNDC3B-207ENST00000469491 SAMD9Q5K651 1589 aa25.59■■□□□ 1.69
FNDC3B-207ENST00000469491 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
FNDC3B-207ENST00000469491 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
FNDC3B-207ENST00000469491 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.68
FNDC3B-207ENST00000469491 ARID3CA6NKF2 412 aa25.57■■□□□ 1.68
FNDC3B-207ENST00000469491 RRBP1Q9P2E9 1410 aaKnown RBP25.57■■□□□ 1.68
FNDC3B-207ENST00000469491 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
FNDC3B-207ENST00000469491 PHLDB1Q86UU1 1377 aa25.56■■□□□ 1.68
FNDC3B-207ENST00000469491 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
FNDC3B-207ENST00000469491 FAM50AQ14320 339 aaKnown RBP25.52■■□□□ 1.68
FNDC3B-207ENST00000469491 CFAP43Q8NDM7 1665 aa25.52■■□□□ 1.68
FNDC3B-207ENST00000469491 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
FNDC3B-207ENST00000469491 LRRIQ1Q96JM4 1722 aa25.45■■□□□ 1.66
FNDC3B-207ENST00000469491 MTUS2Q5JR59 1369 aa25.45■■□□□ 1.66
FNDC3B-207ENST00000469491 MAGI1Q96QZ7 1491 aaPredicted RBP25.43■■□□□ 1.66
FNDC3B-207ENST00000469491 KIAA0586Q9BVV6 1533 aa25.42■■□□□ 1.66
FNDC3B-207ENST00000469491 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
FNDC3B-207ENST00000469491 UGGT2Q9NYU1 1516 aa25.35■■□□□ 1.65
FNDC3B-207ENST00000469491 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
FNDC3B-207ENST00000469491 DISP1Q96F81 1524 aa25.34■■□□□ 1.65
FNDC3B-207ENST00000469491 CDK13Q14004 1512 aaKnown RBP25.3■■□□□ 1.64
FNDC3B-207ENST00000469491 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
FNDC3B-207ENST00000469491 KIAA0556O60303 1618 aa25.28■■□□□ 1.64
FNDC3B-207ENST00000469491 MAGI3Q5TCQ9 1506 aa25.28■■□□□ 1.64
FNDC3B-207ENST00000469491 DHX57Q6P158 1386 aaKnown RBP25.28■■□□□ 1.64
FNDC3B-207ENST00000469491 EPRSP07814 1512 aaKnown RBP25.26■■□□□ 1.63
FNDC3B-207ENST00000469491 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
FNDC3B-207ENST00000469491 HECW1Q76N89 1606 aa25.24■■□□□ 1.63
FNDC3B-207ENST00000469491 RAB3GAP2Q9H2M9 1393 aa25.24■■□□□ 1.63
FNDC3B-207ENST00000469491 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
FNDC3B-207ENST00000469491 NUP160Q12769 1436 aa25.21■■□□□ 1.63
FNDC3B-207ENST00000469491 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.62
FNDC3B-207ENST00000469491 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
FNDC3B-207ENST00000469491 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
FNDC3B-207ENST00000469491 PLB1Q6P1J6 1458 aa25.16■■□□□ 1.62
FNDC3B-207ENST00000469491 MYOM3Q5VTT5 1437 aa25.15■■□□□ 1.62
FNDC3B-207ENST00000469491 SETD5Q9C0A6 1442 aa25.14■■□□□ 1.62
FNDC3B-207ENST00000469491 NUP153P49790 1475 aaKnown RBP25.14■■□□□ 1.61
FNDC3B-207ENST00000469491 CARMIL2Q6F5E8 1435 aa25.11■■□□□ 1.61
FNDC3B-207ENST00000469491 RAPGEF6Q8TEU7 1601 aa25.1■■□□□ 1.61
FNDC3B-207ENST00000469491 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
FNDC3B-207ENST00000469491 CHIC2Q9UKJ5 165 aa25.07■■□□□ 1.6
FNDC3B-207ENST00000469491 CHD1O14646 1710 aa25.07■■□□□ 1.6
FNDC3B-207ENST00000469491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.04■■□□□ 1.64e-15■□□□□ 8.2
FNDC3B-207ENST00000469491 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
FNDC3B-207ENST00000469491 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
FNDC3B-207ENST00000469491 PTPN23Q9H3S7 1636 aa25.02■■□□□ 1.6
FNDC3B-207ENST00000469491 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
FNDC3B-207ENST00000469491 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
FNDC3B-207ENST00000469491 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
FNDC3B-207ENST00000469491 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
FNDC3B-207ENST00000469491 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
FNDC3B-207ENST00000469491 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
FNDC3B-207ENST00000469491 NEUROD1Q13562 356 aa24.95■■□□□ 1.58
FNDC3B-207ENST00000469491 SIN3AQ96ST3 1273 aa24.95■■□□□ 1.58
FNDC3B-207ENST00000469491 MAPKBP1O60336 1514 aa24.94■■□□□ 1.58
FNDC3B-207ENST00000469491 PTPRGP23470 1445 aa24.92■■□□□ 1.58
FNDC3B-207ENST00000469491 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
FNDC3B-207ENST00000469491 TROQ12816 1431 aaPredicted RBP24.88■■□□□ 1.57
FNDC3B-207ENST00000469491 HFM1A2PYH4 1435 aa24.88■■□□□ 1.57
FNDC3B-207ENST00000469491 NAIPQ13075 1403 aa24.88■■□□□ 1.57
FNDC3B-207ENST00000469491 PLEKHD1A6NEE1 506 aa24.87■■□□□ 1.57
FNDC3B-207ENST00000469491 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
FNDC3B-207ENST00000469491 ERCC6L2Q5T890 1561 aa24.86■■□□□ 1.57
FNDC3B-207ENST00000469491 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
FNDC3B-207ENST00000469491 KIF14Q15058 1648 aa24.85■■□□□ 1.57
FNDC3B-207ENST00000469491 ATP10BO94823 1461 aa24.85■■□□□ 1.57
FNDC3B-207ENST00000469491 ABCA8O94911 1581 aa24.85■■□□□ 1.57
FNDC3B-207ENST00000469491 CFDP1Q9UEE9 299 aaPredicted RBP24.84■■□□□ 1.57
FNDC3B-207ENST00000469491 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
FNDC3B-207ENST00000469491 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
FNDC3B-207ENST00000469491 DAPK1P53355 1430 aa24.73■■□□□ 1.55
FNDC3B-207ENST00000469491 KDM6BO15054 1643 aa24.73■■□□□ 1.55
FNDC3B-207ENST00000469491 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
FNDC3B-207ENST00000469491 ABCC5O15440 1437 aa24.73■■□□□ 1.55
FNDC3B-207ENST00000469491 UACAQ9BZF9 1416 aa24.72■■□□□ 1.55
FNDC3B-207ENST00000469491 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
FNDC3B-207ENST00000469491 KCNH8Q96L42 1107 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms