RNA–Protein interactions for RNA: ENST00000469271.1

NOM1-203, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 1,209 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-203ENST00000469271 SHROOM2Q13796 1616 aa34.34■■■■□ 3.09
NOM1-203ENST00000469271 ARAP1Q96P48 1450 aa34.32■■■■□ 3.08
NOM1-203ENST00000469271 CYB5RLQ6IPT4 315 aa34.29■■■■□ 3.08
NOM1-203ENST00000469271 JPH4Q96JJ6 628 aa34.29■■■■□ 3.08
NOM1-203ENST00000469271 PRXQ9BXM0 1461 aa34.25■■■■□ 3.07
NOM1-203ENST00000469271 CSRNP3Q8WYN3 585 aa34.24■■■■□ 3.07
NOM1-203ENST00000469271 PRG4Q92954 1404 aaPredicted RBP34.21■■■■□ 3.07
NOM1-203ENST00000469271 ERCC6L2Q5T890 1561 aa34.16■■■■□ 3.06
NOM1-203ENST00000469271 IQGAP2Q13576 1575 aa34.14■■■■□ 3.06
NOM1-203ENST00000469271 FAM9AQ8IZU1 332 aaPredicted RBP34.05■■■■□ 3.04
NOM1-203ENST00000469271 CARMIL2Q6F5E8 1435 aa34.01■■■■□ 3.03
NOM1-203ENST00000469271 CTTNBP2Q8WZ74 1663 aa33.99■■■■□ 3.03
NOM1-203ENST00000469271 UGGT2Q9NYU1 1516 aa33.96■■■■□ 3.03
NOM1-203ENST00000469271 KIF21BO75037 1637 aa33.93■■■■□ 3.02
NOM1-203ENST00000469271 TNIKQ9UKE5 1360 aa33.86■■■■□ 3.01
NOM1-203ENST00000469271 DISP1Q96F81 1524 aa33.86■■■■□ 3.01
NOM1-203ENST00000469271 GOLGA3Q08378 1498 aa33.83■■■■□ 3.01
NOM1-203ENST00000469271 PTPRGP23470 1445 aa33.83■■■■□ 3.01
NOM1-203ENST00000469271 KIAA0556O60303 1618 aa33.79■■■■□ 3
NOM1-203ENST00000469271 TTBK1Q5TCY1 1321 aaPredicted RBP33.68■■■□□ 2.98
NOM1-203ENST00000469271 NPM1P06748 294 aaKnown RBP eCLIP33.66■■■□□ 2.98
NOM1-203ENST00000469271 ADCY10Q96PN6 1610 aa33.65■■■□□ 2.98
NOM1-203ENST00000469271 UBTFP17480 764 aaKnown RBP33.65■■■□□ 2.98
NOM1-203ENST00000469271 UACAQ9BZF9 1416 aa33.61■■■□□ 2.97
NOM1-203ENST00000469271 UHRF1BP1LA0JNW5 1464 aa33.59■■■□□ 2.97
NOM1-203ENST00000469271 TRHP20396 242 aaPredicted RBP33.59■■■□□ 2.97
NOM1-203ENST00000469271 SAMD9Q5K651 1589 aa33.58■■■□□ 2.97
NOM1-203ENST00000469271 EHMT2Q96KQ7 1210 aa33.56■■■□□ 2.96
NOM1-203ENST00000469271 ABCC2Q92887 1545 aa33.53■■■□□ 2.96
NOM1-203ENST00000469271 EFCAB5A4FU69 1503 aa33.51■■■□□ 2.95
NOM1-203ENST00000469271 MAPKBP1O60336 1514 aa33.5■■■□□ 2.95
NOM1-203ENST00000469271 RANGAP1P46060 587 aaPredicted RBP33.48■■■□□ 2.95
NOM1-203ENST00000469271 P3H3Q8IVL6 736 aa33.48■■■□□ 2.95
NOM1-203ENST00000469271 PLB1Q6P1J6 1458 aa33.44■■■□□ 2.94
NOM1-203ENST00000469271 ABCA8O94911 1581 aa33.42■■■□□ 2.94
NOM1-203ENST00000469271 KDM5BQ9UGL1 1544 aa33.41■■■□□ 2.94
NOM1-203ENST00000469271 FHOD3Q2V2M9 1422 aa33.36■■■□□ 2.93
NOM1-203ENST00000469271 ABCC10Q5T3U5 1492 aa33.32■■■□□ 2.92
NOM1-203ENST00000469271 ZCCHC11Q5TAX3 1644 aaKnown RBP33.29■■■□□ 2.92
NOM1-203ENST00000469271 ASXL2Q76L83 1435 aa33.28■■■□□ 2.92
NOM1-203ENST00000469271 ARHGAP35Q9NRY4 1499 aa33.27■■■□□ 2.92
NOM1-203ENST00000469271 RAPGEF6Q8TEU7 1601 aa33.26■■■□□ 2.91
NOM1-203ENST00000469271 FAM69CQ0P6D2 419 aa33.24■■■□□ 2.91
NOM1-203ENST00000469271 DIP2BQ9P265 1576 aa33.23■■■□□ 2.91
NOM1-203ENST00000469271 KIF13AQ9H1H9 1805 aa33.22■■■□□ 2.91
NOM1-203ENST00000469271 FMN1Q68DA7 1419 aa33.21■■■□□ 2.91
NOM1-203ENST00000469271 WDR7Q9Y4E6 1490 aa33.15■■■□□ 2.9
NOM1-203ENST00000469271 ATP10BO94823 1461 aa33.14■■■□□ 2.9
NOM1-203ENST00000469271 NUP153P49790 1475 aaKnown RBP33.13■■■□□ 2.89
NOM1-203ENST00000469271 CLIP1P30622 1438 aa33.12■■■□□ 2.89
NOM1-203ENST00000469271 GLI2P10070 1586 aa33.1■■■□□ 2.89
NOM1-203ENST00000469271 EPRSP07814 1512 aaKnown RBP33.09■■■□□ 2.89
NOM1-203ENST00000469271 ARID3CA6NKF2 412 aa33.08■■■□□ 2.89
NOM1-203ENST00000469271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.04■■■□□ 2.88
NOM1-203ENST00000469271 HNRNPUL2Q1KMD3 747 aaKnown RBP33.04■■■□□ 2.88
NOM1-203ENST00000469271 HECW1Q76N89 1606 aa33.01■■■□□ 2.87
NOM1-203ENST00000469271 CEP162Q5TB80 1403 aa32.98■■■□□ 2.87
NOM1-203ENST00000469271 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
NOM1-203ENST00000469271 KCNH8Q96L42 1107 aa32.95■■■□□ 2.87
NOM1-203ENST00000469271 ATP1B4Q9UN42 357 aaPredicted RBP32.94■■■□□ 2.86
NOM1-203ENST00000469271 MAP3K4Q9Y6R4 1608 aa32.92■■■□□ 2.86
NOM1-203ENST00000469271 PLEKHD1A6NEE1 506 aa32.92■■■□□ 2.86
NOM1-203ENST00000469271 CASKIN1Q8WXD9 1431 aa32.92■■■□□ 2.86
NOM1-203ENST00000469271 TSPOAP1O95153 1857 aa32.88■■■□□ 2.85
NOM1-203ENST00000469271 CDK13Q14004 1512 aaKnown RBP32.87■■■□□ 2.85
NOM1-203ENST00000469271 CDK11AQ9UQ88 783 aaPredicted RBP32.86■■■□□ 2.85
NOM1-203ENST00000469271 FYCO1Q9BQS8 1478 aa32.86■■■□□ 2.85
NOM1-203ENST00000469271 CFAP43Q8NDM7 1665 aa32.85■■■□□ 2.85
NOM1-203ENST00000469271 PCF11O94913 1555 aaKnown RBP32.85■■■□□ 2.85
NOM1-203ENST00000469271 TEX14Q8IWB6 1497 aa32.85■■■□□ 2.85
NOM1-203ENST00000469271 CD109Q6YHK3 1445 aa32.84■■■□□ 2.85
NOM1-203ENST00000469271 CCDC18Q5T9S5 1454 aa32.82■■■□□ 2.84
NOM1-203ENST00000469271 PPRC1Q5VV67 1664 aaKnown RBP32.8■■■□□ 2.84
NOM1-203ENST00000469271 ABCA9Q8IUA7 1624 aa32.79■■■□□ 2.84
NOM1-203ENST00000469271 MAGI3Q5TCQ9 1506 aa32.78■■■□□ 2.84
NOM1-203ENST00000469271 KDM6BO15054 1643 aa32.71■■■□□ 2.83
NOM1-203ENST00000469271 LRRIQ1Q96JM4 1722 aa32.71■■■□□ 2.83
NOM1-203ENST00000469271 TROQ12816 1431 aaPredicted RBP32.68■■■□□ 2.82
NOM1-203ENST00000469271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.64■■■□□ 2.82
NOM1-203ENST00000469271 PHLDB1Q86UU1 1377 aa32.61■■■□□ 2.81
NOM1-203ENST00000469271 KIF14Q15058 1648 aa32.61■■■□□ 2.81
NOM1-203ENST00000469271 VPS8Q8N3P4 1428 aa32.6■■■□□ 2.81
NOM1-203ENST00000469271 TTC37Q6PGP7 1564 aa32.58■■■□□ 2.81
NOM1-203ENST00000469271 NEO1Q92859 1461 aa32.56■■■□□ 2.8
NOM1-203ENST00000469271 COL17A1Q9UMD9 1497 aaPredicted RBP32.5■■■□□ 2.79
NOM1-203ENST00000469271 ARAP3Q8WWN8 1544 aa32.5■■■□□ 2.79
NOM1-203ENST00000469271 CFAP74Q9C0B2 1584 aa32.49■■■□□ 2.79
NOM1-203ENST00000469271 PLCH2O75038 1416 aa32.49■■■□□ 2.79
NOM1-203ENST00000469271 FANCAO15360 1455 aa32.48■■■□□ 2.79
NOM1-203ENST00000469271 MTUS2Q5JR59 1369 aa32.46■■■□□ 2.79
NOM1-203ENST00000469271 MYO5CQ9NQX4 1742 aa32.44■■■□□ 2.78
NOM1-203ENST00000469271 AKNAQ7Z591 1439 aa32.4■■■□□ 2.78
NOM1-203ENST00000469271 EFCAB2Q5VUJ9 269 aa32.39■■■□□ 2.78
NOM1-203ENST00000469271 EHBP1L1Q8N3D4 1523 aa32.39■■■□□ 2.78
NOM1-203ENST00000469271 TIAM1Q13009 1591 aa32.36■■■□□ 2.77
NOM1-203ENST00000469271 ARHGAP5Q13017 1502 aa32.35■■■□□ 2.77
NOM1-203ENST00000469271 MAP3K1Q13233 1512 aa32.35■■■□□ 2.77
NOM1-203ENST00000469271 DENND4BO75064 1496 aaPredicted RBP32.31■■■□□ 2.76
NOM1-203ENST00000469271 PREX2Q70Z35 1606 aa32.3■■■□□ 2.76
NOM1-203ENST00000469271 ADGRL1O94910 1474 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms