RNA–Protein interactions for RNA: ENST00000469205.2

UBE2A-204, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-204ENST00000469205 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
UBE2A-204ENST00000469205 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
UBE2A-204ENST00000469205 PRG4Q92954 1404 aaPredicted RBP20.12■□□□□ 0.81
UBE2A-204ENST00000469205 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
UBE2A-204ENST00000469205 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
UBE2A-204ENST00000469205 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
UBE2A-204ENST00000469205 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
UBE2A-204ENST00000469205 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
UBE2A-204ENST00000469205 IQGAP2Q13576 1575 aa20.06■□□□□ 0.8
UBE2A-204ENST00000469205 KIF21BO75037 1637 aa20.05■□□□□ 0.8
UBE2A-204ENST00000469205 UGGT2Q9NYU1 1516 aa20.04■□□□□ 0.8
UBE2A-204ENST00000469205 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
UBE2A-204ENST00000469205 GOLGA3Q08378 1498 aa20■□□□□ 0.79
UBE2A-204ENST00000469205 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
UBE2A-204ENST00000469205 UBTFP17480 764 aaKnown RBP19.98■□□□□ 0.79
UBE2A-204ENST00000469205 PTPRGP23470 1445 aa19.96■□□□□ 0.79
UBE2A-204ENST00000469205 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
UBE2A-204ENST00000469205 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
UBE2A-204ENST00000469205 CTTNBP2Q8WZ74 1663 aa19.92■□□□□ 0.78
UBE2A-204ENST00000469205 NPM1P06748 294 aaKnown RBP eCLIP19.86■□□□□ 0.77
UBE2A-204ENST00000469205 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
UBE2A-204ENST00000469205 UACAQ9BZF9 1416 aa19.82■□□□□ 0.76
UBE2A-204ENST00000469205 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
UBE2A-204ENST00000469205 EFCAB5A4FU69 1503 aa19.81■□□□□ 0.76
UBE2A-204ENST00000469205 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
UBE2A-204ENST00000469205 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
UBE2A-204ENST00000469205 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
UBE2A-204ENST00000469205 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
UBE2A-204ENST00000469205 ABCC2Q92887 1545 aa19.71■□□□□ 0.75
UBE2A-204ENST00000469205 RANGAP1P46060 587 aaPredicted RBP19.71■□□□□ 0.75
UBE2A-204ENST00000469205 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
UBE2A-204ENST00000469205 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
UBE2A-204ENST00000469205 KDM5BQ9UGL1 1544 aa19.68■□□□□ 0.74
UBE2A-204ENST00000469205 ADCY10Q96PN6 1610 aa19.68■□□□□ 0.74
UBE2A-204ENST00000469205 FHOD3Q2V2M9 1422 aa19.67■□□□□ 0.74
UBE2A-204ENST00000469205 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
UBE2A-204ENST00000469205 ABCA8O94911 1581 aa19.66■□□□□ 0.74
UBE2A-204ENST00000469205 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
UBE2A-204ENST00000469205 CLIP1P30622 1438 aa19.65■□□□□ 0.74
UBE2A-204ENST00000469205 MAPKBP1O60336 1514 aa19.65■□□□□ 0.74
UBE2A-204ENST00000469205 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
UBE2A-204ENST00000469205 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
UBE2A-204ENST00000469205 ATP10BO94823 1461 aa19.56■□□□□ 0.72
UBE2A-204ENST00000469205 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
UBE2A-204ENST00000469205 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
UBE2A-204ENST00000469205 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
UBE2A-204ENST00000469205 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
UBE2A-204ENST00000469205 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
UBE2A-204ENST00000469205 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
UBE2A-204ENST00000469205 PLEKHD1A6NEE1 506 aa19.52■□□□□ 0.72
UBE2A-204ENST00000469205 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
UBE2A-204ENST00000469205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
UBE2A-204ENST00000469205 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
UBE2A-204ENST00000469205 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
UBE2A-204ENST00000469205 ZCCHC11Q5TAX3 1644 aaKnown RBP19.48■□□□□ 0.71
UBE2A-204ENST00000469205 ATP1B4Q9UN42 357 aaPredicted RBP19.46■□□□□ 0.71
UBE2A-204ENST00000469205 GLI2P10070 1586 aa19.45■□□□□ 0.7
UBE2A-204ENST00000469205 FYCO1Q9BQS8 1478 aa19.44■□□□□ 0.7
UBE2A-204ENST00000469205 EPRSP07814 1512 aaKnown RBP19.44■□□□□ 0.7
UBE2A-204ENST00000469205 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
UBE2A-204ENST00000469205 CCDC18Q5T9S5 1454 aa19.42■□□□□ 0.7
UBE2A-204ENST00000469205 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
UBE2A-204ENST00000469205 ARID3CA6NKF2 412 aa19.4■□□□□ 0.7
UBE2A-204ENST00000469205 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
UBE2A-204ENST00000469205 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
UBE2A-204ENST00000469205 CD109Q6YHK3 1445 aa19.34■□□□□ 0.69
UBE2A-204ENST00000469205 PHLDB1Q86UU1 1377 aa19.32■□□□□ 0.68
UBE2A-204ENST00000469205 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
UBE2A-204ENST00000469205 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
UBE2A-204ENST00000469205 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
UBE2A-204ENST00000469205 PCF11O94913 1555 aaKnown RBP19.31■□□□□ 0.68
UBE2A-204ENST00000469205 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
UBE2A-204ENST00000469205 TEX14Q8IWB6 1497 aa19.3■□□□□ 0.68
UBE2A-204ENST00000469205 MAP3K1Q13233 1512 aa19.27■□□□□ 0.68
UBE2A-204ENST00000469205 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
UBE2A-204ENST00000469205 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
UBE2A-204ENST00000469205 APLP2Q06481 763 aa19.25■□□□□ 0.67
UBE2A-204ENST00000469205 CFAP43Q8NDM7 1665 aa19.24■□□□□ 0.67
UBE2A-204ENST00000469205 MTUS2Q5JR59 1369 aa19.22■□□□□ 0.67
UBE2A-204ENST00000469205 PLCH2O75038 1416 aa19.21■□□□□ 0.67
UBE2A-204ENST00000469205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■■■□□ 17.9
UBE2A-204ENST00000469205 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
UBE2A-204ENST00000469205 NEO1Q92859 1461 aa19.19■□□□□ 0.66
UBE2A-204ENST00000469205 ARAP3Q8WWN8 1544 aa19.18■□□□□ 0.66
UBE2A-204ENST00000469205 KIF14Q15058 1648 aa19.16■□□□□ 0.66
UBE2A-204ENST00000469205 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
UBE2A-204ENST00000469205 TIAM1Q13009 1591 aa19.13■□□□□ 0.65
UBE2A-204ENST00000469205 PPRC1Q5VV67 1664 aaKnown RBP19.12■□□□□ 0.65
UBE2A-204ENST00000469205 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
UBE2A-204ENST00000469205 LRRC9Q6ZRR7 1453 aa19.12■□□□□ 0.65
UBE2A-204ENST00000469205 FANCAO15360 1455 aa19.11■□□□□ 0.65
UBE2A-204ENST00000469205 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
UBE2A-204ENST00000469205 AKNAQ7Z591 1439 aa19.1■□□□□ 0.65
UBE2A-204ENST00000469205 CCNB3Q8WWL7 1395 aa19.09■□□□□ 0.65
UBE2A-204ENST00000469205 TSPOAP1O95153 1857 aa19.07■□□□□ 0.64
UBE2A-204ENST00000469205 TTC37Q6PGP7 1564 aa19.07■□□□□ 0.64
UBE2A-204ENST00000469205 GPATCH8Q9UKJ3 1502 aaKnown RBP19.07■□□□□ 0.64
UBE2A-204ENST00000469205 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
UBE2A-204ENST00000469205 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
UBE2A-204ENST00000469205 CFAP74Q9C0B2 1584 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms