RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
TMEM50B-206ENST00000468874 MNX1P50219 401 aaPredicted RBP14.39□□□□□ -0.11
TMEM50B-206ENST00000468874 MIER1Q8N108 512 aa14.36□□□□□ -0.11
TMEM50B-206ENST00000468874 EVX2Q03828 476 aa14.34□□□□□ -0.11
TMEM50B-206ENST00000468874 NESP48681 1621 aa14.33□□□□□ -0.11
TMEM50B-206ENST00000468874 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
TMEM50B-206ENST00000468874 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
TMEM50B-206ENST00000468874 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
TMEM50B-206ENST00000468874 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
TMEM50B-206ENST00000468874 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-206ENST00000468874 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
TMEM50B-206ENST00000468874 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
TMEM50B-206ENST00000468874 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
TMEM50B-206ENST00000468874 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
TMEM50B-206ENST00000468874 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
TMEM50B-206ENST00000468874 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
TMEM50B-206ENST00000468874 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
TMEM50B-206ENST00000468874 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
TMEM50B-206ENST00000468874 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
TMEM50B-206ENST00000468874 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
TMEM50B-206ENST00000468874 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
TMEM50B-206ENST00000468874 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
TMEM50B-206ENST00000468874 ZNF579Q8NAF0 562 aaKnown RBP14.09□□□□□ -0.15
TMEM50B-206ENST00000468874 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
TMEM50B-206ENST00000468874 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
TMEM50B-206ENST00000468874 BAZ1AQ9NRL2 1556 aaPredicted RBP14.06□□□□□ -0.16
TMEM50B-206ENST00000468874 GABBR2O75899 941 aa14.06□□□□□ -0.16
TMEM50B-206ENST00000468874 CLCN6P51797 869 aa14.06□□□□□ -0.16
TMEM50B-206ENST00000468874 NUBP1P53384 320 aa14.06□□□□□ -0.16
TMEM50B-206ENST00000468874 RASEFQ8IZ41 740 aa14.05□□□□□ -0.16
TMEM50B-206ENST00000468874 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
TMEM50B-206ENST00000468874 WDR62O43379 1518 aa14.04□□□□□ -0.16
TMEM50B-206ENST00000468874 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
TMEM50B-206ENST00000468874 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.17
TMEM50B-206ENST00000468874 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
TMEM50B-206ENST00000468874 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
TMEM50B-206ENST00000468874 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
TMEM50B-206ENST00000468874 PHF12Q96QT6 1004 aa13.97□□□□□ -0.17
TMEM50B-206ENST00000468874 FAM212AQ96EL1 285 aa13.92□□□□□ -0.18
TMEM50B-206ENST00000468874 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
TMEM50B-206ENST00000468874 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
TMEM50B-206ENST00000468874 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
TMEM50B-206ENST00000468874 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
TMEM50B-206ENST00000468874 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
TMEM50B-206ENST00000468874 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
TMEM50B-206ENST00000468874 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
TMEM50B-206ENST00000468874 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
TMEM50B-206ENST00000468874 KIF12Q96FN5 646 aa13.86□□□□□ -0.19
TMEM50B-206ENST00000468874 ARHGEF11O15085 1522 aa13.84□□□□□ -0.19
TMEM50B-206ENST00000468874 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
TMEM50B-206ENST00000468874 GSE1Q14687 1217 aa13.82□□□□□ -0.2
TMEM50B-206ENST00000468874 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
TMEM50B-206ENST00000468874 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
TMEM50B-206ENST00000468874 MAP3K13O43283 966 aa13.78□□□□□ -0.2
TMEM50B-206ENST00000468874 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
TMEM50B-206ENST00000468874 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
TMEM50B-206ENST00000468874 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
TMEM50B-206ENST00000468874 CFTRP13569 1480 aa13.74□□□□□ -0.21
TMEM50B-206ENST00000468874 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
TMEM50B-206ENST00000468874 PYGBP11216 843 aa13.71□□□□□ -0.21
TMEM50B-206ENST00000468874 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
TMEM50B-206ENST00000468874 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
TMEM50B-206ENST00000468874 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
TMEM50B-206ENST00000468874 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
TMEM50B-206ENST00000468874 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
TMEM50B-206ENST00000468874 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
TMEM50B-206ENST00000468874 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
TMEM50B-206ENST00000468874 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
TMEM50B-206ENST00000468874 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
TMEM50B-206ENST00000468874 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
TMEM50B-206ENST00000468874 TIE1P35590 1138 aa13.62□□□□□ -0.23
TMEM50B-206ENST00000468874 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
TMEM50B-206ENST00000468874 BMP2KQ9NSY1 1161 aaPredicted RBP13.59□□□□□ -0.23
TMEM50B-206ENST00000468874 WIZO95785 1651 aa13.57□□□□□ -0.24
TMEM50B-206ENST00000468874 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
TMEM50B-206ENST00000468874 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
TMEM50B-206ENST00000468874 ZNF467Q7Z7K2 595 aaPredicted RBP13.55□□□□□ -0.24
TMEM50B-206ENST00000468874 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
TMEM50B-206ENST00000468874 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
TMEM50B-206ENST00000468874 TTLL13PA6NNM8 815 aa13.53□□□□□ -0.24
TMEM50B-206ENST00000468874 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
TMEM50B-206ENST00000468874 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
TMEM50B-206ENST00000468874 SLC39A7Q92504 469 aa13.48□□□□□ -0.25
TMEM50B-206ENST00000468874 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
TMEM50B-206ENST00000468874 AQRO60306 1485 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMEM50B-206ENST00000468874 CHD1O14646 1710 aa13.45□□□□□ -0.26
TMEM50B-206ENST00000468874 C7P10643 843 aa13.45□□□□□ -0.26
TMEM50B-206ENST00000468874 PKD2Q13563 968 aa13.43□□□□□ -0.26
TMEM50B-206ENST00000468874 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
TMEM50B-206ENST00000468874 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
TMEM50B-206ENST00000468874 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
TMEM50B-206ENST00000468874 PSEN1P49768 467 aa13.41□□□□□ -0.26
TMEM50B-206ENST00000468874 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
TMEM50B-206ENST00000468874 LHX8Q68G74 356 aa13.41□□□□□ -0.26
TMEM50B-206ENST00000468874 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
TMEM50B-206ENST00000468874 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
TMEM50B-206ENST00000468874 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
TMEM50B-206ENST00000468874 IER5LQ5T953 404 aa13.38□□□□□ -0.27
TMEM50B-206ENST00000468874 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
TMEM50B-206ENST00000468874 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms