RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 ARAP1Q96P48 1450 aa23.66■■□□□ 1.38
CRAMP1-206ENST00000468839 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
CRAMP1-206ENST00000468839 EFCAB5A4FU69 1503 aa23.64■■□□□ 1.37
CRAMP1-206ENST00000468839 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
CRAMP1-206ENST00000468839 IQGAP2Q13576 1575 aa23.6■■□□□ 1.37
CRAMP1-206ENST00000468839 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
CRAMP1-206ENST00000468839 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
CRAMP1-206ENST00000468839 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
CRAMP1-206ENST00000468839 CHD1O14646 1710 aa23.53■■□□□ 1.36
CRAMP1-206ENST00000468839 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
CRAMP1-206ENST00000468839 NUP160Q12769 1436 aa23.52■■□□□ 1.36
CRAMP1-206ENST00000468839 UGGT2Q9NYU1 1516 aa23.51■■□□□ 1.35
CRAMP1-206ENST00000468839 FBLN2P98095 1184 aa23.45■■□□□ 1.34
CRAMP1-206ENST00000468839 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
CRAMP1-206ENST00000468839 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
CRAMP1-206ENST00000468839 TRIM26Q12899 539 aaPredicted RBP23.39■■□□□ 1.33
CRAMP1-206ENST00000468839 FMN1Q68DA7 1419 aa23.38■■□□□ 1.33
CRAMP1-206ENST00000468839 APLP2Q06481 763 aa23.37■■□□□ 1.33
CRAMP1-206ENST00000468839 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
CRAMP1-206ENST00000468839 KIAA0556O60303 1618 aa23.36■■□□□ 1.33
CRAMP1-206ENST00000468839 DISP1Q96F81 1524 aa23.34■■□□□ 1.33
CRAMP1-206ENST00000468839 PCF11O94913 1555 aaKnown RBP23.34■■□□□ 1.33
CRAMP1-206ENST00000468839 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.32
CRAMP1-206ENST00000468839 FYCO1Q9BQS8 1478 aa23.32■■□□□ 1.32
CRAMP1-206ENST00000468839 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
CRAMP1-206ENST00000468839 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
CRAMP1-206ENST00000468839 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
CRAMP1-206ENST00000468839 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
CRAMP1-206ENST00000468839 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
CRAMP1-206ENST00000468839 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
CRAMP1-206ENST00000468839 LRRIQ1Q96JM4 1722 aa23.25■■□□□ 1.31
CRAMP1-206ENST00000468839 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
CRAMP1-206ENST00000468839 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
CRAMP1-206ENST00000468839 HECW1Q76N89 1606 aa23.19■■□□□ 1.3
CRAMP1-206ENST00000468839 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
CRAMP1-206ENST00000468839 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
CRAMP1-206ENST00000468839 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
CRAMP1-206ENST00000468839 RAPGEF6Q8TEU7 1601 aa23.14■■□□□ 1.29
CRAMP1-206ENST00000468839 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
CRAMP1-206ENST00000468839 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
CRAMP1-206ENST00000468839 TTBK1Q5TCY1 1321 aaPredicted RBP23.11■■□□□ 1.29
CRAMP1-206ENST00000468839 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
CRAMP1-206ENST00000468839 ABCA8O94911 1581 aa23.05■■□□□ 1.28
CRAMP1-206ENST00000468839 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
CRAMP1-206ENST00000468839 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
CRAMP1-206ENST00000468839 PTPRGP23470 1445 aa23■■□□□ 1.27
CRAMP1-206ENST00000468839 PLB1Q6P1J6 1458 aa22.99■■□□□ 1.27
CRAMP1-206ENST00000468839 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
CRAMP1-206ENST00000468839 EHBP1L1Q8N3D4 1523 aa22.98■■□□□ 1.27
CRAMP1-206ENST00000468839 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
CRAMP1-206ENST00000468839 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
CRAMP1-206ENST00000468839 MTUS2Q5JR59 1369 aa22.96■■□□□ 1.27
CRAMP1-206ENST00000468839 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
CRAMP1-206ENST00000468839 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
CRAMP1-206ENST00000468839 UACAQ9BZF9 1416 aa22.89■■□□□ 1.25
CRAMP1-206ENST00000468839 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
CRAMP1-206ENST00000468839 PHLDB1Q86UU1 1377 aa22.88■■□□□ 1.25
CRAMP1-206ENST00000468839 CDK11AQ9UQ88 783 aaPredicted RBP22.87■■□□□ 1.25
CRAMP1-206ENST00000468839 ATP10BO94823 1461 aa22.85■■□□□ 1.25
CRAMP1-206ENST00000468839 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
CRAMP1-206ENST00000468839 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
CRAMP1-206ENST00000468839 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
CRAMP1-206ENST00000468839 ADCY10Q96PN6 1610 aa22.83■■□□□ 1.25
CRAMP1-206ENST00000468839 UHRF1BP1LA0JNW5 1464 aa22.83■■□□□ 1.25
CRAMP1-206ENST00000468839 TROQ12816 1431 aaPredicted RBP22.81■■□□□ 1.24
CRAMP1-206ENST00000468839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.79■■□□□ 1.24
CRAMP1-206ENST00000468839 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
CRAMP1-206ENST00000468839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
CRAMP1-206ENST00000468839 HNRNPUL2Q1KMD3 747 aaKnown RBP22.78■■□□□ 1.24
CRAMP1-206ENST00000468839 MYOM3Q5VTT5 1437 aa22.77■■□□□ 1.24
CRAMP1-206ENST00000468839 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
CRAMP1-206ENST00000468839 PLEKHD1A6NEE1 506 aa22.73■■□□□ 1.23
CRAMP1-206ENST00000468839 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
CRAMP1-206ENST00000468839 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
CRAMP1-206ENST00000468839 PTPN23Q9H3S7 1636 aa22.7■■□□□ 1.22
CRAMP1-206ENST00000468839 ITSN2Q9NZM3 1697 aa22.69■■□□□ 1.22
CRAMP1-206ENST00000468839 KIF14Q15058 1648 aa22.69■■□□□ 1.22
CRAMP1-206ENST00000468839 MIA2Q96PC5 1412 aa22.69■■□□□ 1.22
CRAMP1-206ENST00000468839 TCOF1Q13428 1488 aaKnown RBP22.67■■□□□ 1.22
CRAMP1-206ENST00000468839 CDC42BPAQ5VT25 1732 aa22.65■■□□□ 1.22
CRAMP1-206ENST00000468839 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
CRAMP1-206ENST00000468839 FAM50AQ14320 339 aaKnown RBP22.63■■□□□ 1.21
CRAMP1-206ENST00000468839 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
CRAMP1-206ENST00000468839 HRCP23327 699 aa22.56■■□□□ 1.2
CRAMP1-206ENST00000468839 RIMBP3CA6NJZ7 1639 aa22.55■■□□□ 1.2
CRAMP1-206ENST00000468839 RIMBP3BA6NNM3 1639 aa22.55■■□□□ 1.2
CRAMP1-206ENST00000468839 RIMBP3Q9UFD9 1639 aa22.55■■□□□ 1.2
CRAMP1-206ENST00000468839 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
CRAMP1-206ENST00000468839 ITGAEP38570 1179 aa22.52■■□□□ 1.2
CRAMP1-206ENST00000468839 PREX2Q70Z35 1606 aa22.52■■□□□ 1.2
CRAMP1-206ENST00000468839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.52■■□□□ 1.19
CRAMP1-206ENST00000468839 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
CRAMP1-206ENST00000468839 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
CRAMP1-206ENST00000468839 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
CRAMP1-206ENST00000468839 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
CRAMP1-206ENST00000468839 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
CRAMP1-206ENST00000468839 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
CRAMP1-206ENST00000468839 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
CRAMP1-206ENST00000468839 SETD5Q9C0A6 1442 aa22.45■■□□□ 1.18
CRAMP1-206ENST00000468839 NPM1P06748 294 aaKnown RBP eCLIP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms