RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 KIAA0586Q9BVV6 1533 aa24.78■■□□□ 1.56
TMEM39A-205ENST00000468676 EEA1Q15075 1411 aa24.78■■□□□ 1.56
TMEM39A-205ENST00000468676 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
TMEM39A-205ENST00000468676 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
TMEM39A-205ENST00000468676 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
TMEM39A-205ENST00000468676 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
TMEM39A-205ENST00000468676 PRXQ9BXM0 1461 aa24.7■■□□□ 1.55
TMEM39A-205ENST00000468676 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
TMEM39A-205ENST00000468676 ERCC6L2Q5T890 1561 aa24.64■■□□□ 1.54
TMEM39A-205ENST00000468676 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
TMEM39A-205ENST00000468676 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
TMEM39A-205ENST00000468676 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
TMEM39A-205ENST00000468676 CTTNBP2Q8WZ74 1663 aa24.54■■□□□ 1.52
TMEM39A-205ENST00000468676 UGGT2Q9NYU1 1516 aa24.5■■□□□ 1.51
TMEM39A-205ENST00000468676 KIF21BO75037 1637 aa24.46■■□□□ 1.51
TMEM39A-205ENST00000468676 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
TMEM39A-205ENST00000468676 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
TMEM39A-205ENST00000468676 PTPRGP23470 1445 aa24.42■■□□□ 1.5
TMEM39A-205ENST00000468676 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
TMEM39A-205ENST00000468676 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
TMEM39A-205ENST00000468676 NPM1P06748 294 aaKnown RBP eCLIP24.31■■□□□ 1.48
TMEM39A-205ENST00000468676 TTBK1Q5TCY1 1321 aaPredicted RBP24.3■■□□□ 1.48
TMEM39A-205ENST00000468676 ADCY10Q96PN6 1610 aa24.28■■□□□ 1.48
TMEM39A-205ENST00000468676 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
TMEM39A-205ENST00000468676 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
TMEM39A-205ENST00000468676 UACAQ9BZF9 1416 aa24.25■■□□□ 1.47
TMEM39A-205ENST00000468676 UHRF1BP1LA0JNW5 1464 aa24.24■■□□□ 1.47
TMEM39A-205ENST00000468676 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
TMEM39A-205ENST00000468676 EHMT2Q96KQ7 1210 aa24.2■■□□□ 1.46
TMEM39A-205ENST00000468676 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
TMEM39A-205ENST00000468676 P3H3Q8IVL6 736 aa24.17■■□□□ 1.46
TMEM39A-205ENST00000468676 MAPKBP1O60336 1514 aa24.16■■□□□ 1.46
TMEM39A-205ENST00000468676 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
TMEM39A-205ENST00000468676 EFCAB5A4FU69 1503 aa24.15■■□□□ 1.46
TMEM39A-205ENST00000468676 PLB1Q6P1J6 1458 aa24.12■■□□□ 1.45
TMEM39A-205ENST00000468676 ABCA8O94911 1581 aa24.11■■□□□ 1.45
TMEM39A-205ENST00000468676 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
TMEM39A-205ENST00000468676 FHOD3Q2V2M9 1422 aa24.05■■□□□ 1.44
TMEM39A-205ENST00000468676 ABCC10Q5T3U5 1492 aa24.05■■□□□ 1.44
TMEM39A-205ENST00000468676 ZCCHC11Q5TAX3 1644 aaKnown RBP24.02■■□□□ 1.44
TMEM39A-205ENST00000468676 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
TMEM39A-205ENST00000468676 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
TMEM39A-205ENST00000468676 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
TMEM39A-205ENST00000468676 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
TMEM39A-205ENST00000468676 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
TMEM39A-205ENST00000468676 DIP2BQ9P265 1576 aa23.97■■□□□ 1.43
TMEM39A-205ENST00000468676 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
TMEM39A-205ENST00000468676 ATP10BO94823 1461 aa23.92■■□□□ 1.42
TMEM39A-205ENST00000468676 WDR7Q9Y4E6 1490 aa23.91■■□□□ 1.42
TMEM39A-205ENST00000468676 GLI2P10070 1586 aa23.89■■□□□ 1.41
TMEM39A-205ENST00000468676 NUP153P49790 1475 aaKnown RBP23.88■■□□□ 1.41
TMEM39A-205ENST00000468676 CLIP1P30622 1438 aa23.88■■□□□ 1.41
TMEM39A-205ENST00000468676 EPRSP07814 1512 aaKnown RBP23.87■■□□□ 1.41
TMEM39A-205ENST00000468676 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
TMEM39A-205ENST00000468676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.84■■□□□ 1.41
TMEM39A-205ENST00000468676 HNRNPUL2Q1KMD3 747 aaKnown RBP23.84■■□□□ 1.41
TMEM39A-205ENST00000468676 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
TMEM39A-205ENST00000468676 KCNH8Q96L42 1107 aa23.8■■□□□ 1.4
TMEM39A-205ENST00000468676 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
TMEM39A-205ENST00000468676 TSPOAP1O95153 1857 aa23.78■■□□□ 1.4
TMEM39A-205ENST00000468676 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
TMEM39A-205ENST00000468676 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
TMEM39A-205ENST00000468676 ATP1B4Q9UN42 357 aaPredicted RBP23.77■■□□□ 1.4
TMEM39A-205ENST00000468676 MAP3K4Q9Y6R4 1608 aa23.76■■□□□ 1.39
TMEM39A-205ENST00000468676 CASKIN1Q8WXD9 1431 aa23.74■■□□□ 1.39
TMEM39A-205ENST00000468676 CDK11AQ9UQ88 783 aaPredicted RBP23.72■■□□□ 1.39
TMEM39A-205ENST00000468676 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
TMEM39A-205ENST00000468676 CDK13Q14004 1512 aaKnown RBP23.7■■□□□ 1.38
TMEM39A-205ENST00000468676 TEX14Q8IWB6 1497 aa23.7■■□□□ 1.38
TMEM39A-205ENST00000468676 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
TMEM39A-205ENST00000468676 FYCO1Q9BQS8 1478 aa23.68■■□□□ 1.38
TMEM39A-205ENST00000468676 PPRC1Q5VV67 1664 aaKnown RBP23.68■■□□□ 1.38
TMEM39A-205ENST00000468676 PCF11O94913 1555 aaKnown RBP23.67■■□□□ 1.38
TMEM39A-205ENST00000468676 CCDC18Q5T9S5 1454 aa23.67■■□□□ 1.38
TMEM39A-205ENST00000468676 ABCA9Q8IUA7 1624 aa23.66■■□□□ 1.38
TMEM39A-205ENST00000468676 MAGI3Q5TCQ9 1506 aa23.65■■□□□ 1.38
TMEM39A-205ENST00000468676 LRRIQ1Q96JM4 1722 aa23.61■■□□□ 1.37
TMEM39A-205ENST00000468676 KDM6BO15054 1643 aa23.6■■□□□ 1.37
TMEM39A-205ENST00000468676 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
TMEM39A-205ENST00000468676 PHLDB1Q86UU1 1377 aa23.55■■□□□ 1.36
TMEM39A-205ENST00000468676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.54■■□□□ 1.363e-7■□□□□ 11.1
TMEM39A-205ENST00000468676 KIF14Q15058 1648 aa23.51■■□□□ 1.35
TMEM39A-205ENST00000468676 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
TMEM39A-205ENST00000468676 NEO1Q92859 1461 aa23.49■■□□□ 1.35
TMEM39A-205ENST00000468676 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
TMEM39A-205ENST00000468676 ARAP3Q8WWN8 1544 aa23.46■■□□□ 1.35
TMEM39A-205ENST00000468676 COL17A1Q9UMD9 1497 aaPredicted RBP23.45■■□□□ 1.34
TMEM39A-205ENST00000468676 CFAP74Q9C0B2 1584 aa23.44■■□□□ 1.34
TMEM39A-205ENST00000468676 PLCH2O75038 1416 aa23.44■■□□□ 1.34
TMEM39A-205ENST00000468676 FANCAO15360 1455 aa23.42■■□□□ 1.34
TMEM39A-205ENST00000468676 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
TMEM39A-205ENST00000468676 MTUS2Q5JR59 1369 aa23.41■■□□□ 1.34
TMEM39A-205ENST00000468676 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
TMEM39A-205ENST00000468676 AKNAQ7Z591 1439 aa23.39■■□□□ 1.33
TMEM39A-205ENST00000468676 EHBP1L1Q8N3D4 1523 aa23.34■■□□□ 1.33
TMEM39A-205ENST00000468676 MAP3K1Q13233 1512 aa23.33■■□□□ 1.33
TMEM39A-205ENST00000468676 TIAM1Q13009 1591 aa23.33■■□□□ 1.33
TMEM39A-205ENST00000468676 ARHGAP5Q13017 1502 aa23.33■■□□□ 1.32
TMEM39A-205ENST00000468676 DENND4BO75064 1496 aaPredicted RBP23.31■■□□□ 1.32
TMEM39A-205ENST00000468676 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms