RNA–Protein interactions for RNA: ENST00000468647.5

FRMD1-206, Transcript of FERM domain containing 1, humanhuman

TSL 2

Gene FRMD1, Length 3,821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-206ENST00000468647 PRKCSHP14314 528 aaPredicted RBP16.02■□□□□ 0.16
FRMD1-206ENST00000468647 TOP2BQ02880 1626 aa16.02■□□□□ 0.15
FRMD1-206ENST00000468647 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.15
FRMD1-206ENST00000468647 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
FRMD1-206ENST00000468647 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
FRMD1-206ENST00000468647 ARAP1Q96P48 1450 aa16■□□□□ 0.15
FRMD1-206ENST00000468647 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
FRMD1-206ENST00000468647 KIF21BO75037 1637 aa15.97■□□□□ 0.15
FRMD1-206ENST00000468647 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
FRMD1-206ENST00000468647 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.15
FRMD1-206ENST00000468647 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.14
FRMD1-206ENST00000468647 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
FRMD1-206ENST00000468647 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
FRMD1-206ENST00000468647 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
FRMD1-206ENST00000468647 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
FRMD1-206ENST00000468647 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
FRMD1-206ENST00000468647 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
FRMD1-206ENST00000468647 FOXD1Q16676 465 aa15.86■□□□□ 0.13
FRMD1-206ENST00000468647 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
FRMD1-206ENST00000468647 MIER1Q8N108 512 aa15.84■□□□□ 0.13
FRMD1-206ENST00000468647 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
FRMD1-206ENST00000468647 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
FRMD1-206ENST00000468647 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
FRMD1-206ENST00000468647 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
FRMD1-206ENST00000468647 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
FRMD1-206ENST00000468647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.11
FRMD1-206ENST00000468647 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
FRMD1-206ENST00000468647 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
FRMD1-206ENST00000468647 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
FRMD1-206ENST00000468647 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
FRMD1-206ENST00000468647 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
FRMD1-206ENST00000468647 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
FRMD1-206ENST00000468647 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
FRMD1-206ENST00000468647 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
FRMD1-206ENST00000468647 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
FRMD1-206ENST00000468647 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
FRMD1-206ENST00000468647 ERICH3Q5RHP9 1530 aa15.7■□□□□ 0.1
FRMD1-206ENST00000468647 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
FRMD1-206ENST00000468647 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
FRMD1-206ENST00000468647 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
FRMD1-206ENST00000468647 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
FRMD1-206ENST00000468647 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
FRMD1-206ENST00000468647 FMN1Q68DA7 1419 aa15.65■□□□□ 0.1
FRMD1-206ENST00000468647 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
FRMD1-206ENST00000468647 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
FRMD1-206ENST00000468647 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
FRMD1-206ENST00000468647 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
FRMD1-206ENST00000468647 SETD5Q9C0A6 1442 aa15.61■□□□□ 0.09
FRMD1-206ENST00000468647 LRRC9Q6ZRR7 1453 aa15.61■□□□□ 0.09
FRMD1-206ENST00000468647 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
FRMD1-206ENST00000468647 RGL3Q3MIN7 710 aa15.59■□□□□ 0.09
FRMD1-206ENST00000468647 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
FRMD1-206ENST00000468647 TSPY4P0CV99 314 aa15.58■□□□□ 0.09
FRMD1-206ENST00000468647 TSPY10P0CW01 314 aa15.58■□□□□ 0.09
FRMD1-206ENST00000468647 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
FRMD1-206ENST00000468647 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
FRMD1-206ENST00000468647 BCANQ96GW7 911 aa15.56■□□□□ 0.08
FRMD1-206ENST00000468647 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
FRMD1-206ENST00000468647 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
FRMD1-206ENST00000468647 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
FRMD1-206ENST00000468647 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
FRMD1-206ENST00000468647 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
FRMD1-206ENST00000468647 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
FRMD1-206ENST00000468647 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
FRMD1-206ENST00000468647 FGD6Q6ZV73 1430 aa15.48■□□□□ 0.07
FRMD1-206ENST00000468647 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
FRMD1-206ENST00000468647 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
FRMD1-206ENST00000468647 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
FRMD1-206ENST00000468647 MPHOSPH9Q99550 1183 aa15.47■□□□□ 0.07
FRMD1-206ENST00000468647 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
FRMD1-206ENST00000468647 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
FRMD1-206ENST00000468647 ANP32CO43423 234 aa15.46■□□□□ 0.07
FRMD1-206ENST00000468647 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
FRMD1-206ENST00000468647 RRBP1Q9P2E9 1410 aaKnown RBP15.46■□□□□ 0.07
FRMD1-206ENST00000468647 PLB1Q6P1J6 1458 aa15.44■□□□□ 0.06
FRMD1-206ENST00000468647 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
FRMD1-206ENST00000468647 PTPRGP23470 1445 aa15.43■□□□□ 0.06
FRMD1-206ENST00000468647 PKD2Q13563 968 aa15.43■□□□□ 0.06
FRMD1-206ENST00000468647 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
FRMD1-206ENST00000468647 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
FRMD1-206ENST00000468647 FYCO1Q9BQS8 1478 aa15.39■□□□□ 0.05
FRMD1-206ENST00000468647 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
FRMD1-206ENST00000468647 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
FRMD1-206ENST00000468647 SALL2Q9Y467 1007 aaPredicted RBP15.37■□□□□ 0.05
FRMD1-206ENST00000468647 CCDC18Q5T9S5 1454 aa15.37■□□□□ 0.05
FRMD1-206ENST00000468647 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
FRMD1-206ENST00000468647 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
FRMD1-206ENST00000468647 DCAF11Q8TEB1 546 aa15.34■□□□□ 0.05
FRMD1-206ENST00000468647 IQGAP2Q13576 1575 aa15.34■□□□□ 0.05
FRMD1-206ENST00000468647 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
FRMD1-206ENST00000468647 NUP155O75694 1391 aa15.34■□□□□ 0.05
FRMD1-206ENST00000468647 EPRSP07814 1512 aaKnown RBP15.33■□□□□ 0.05
FRMD1-206ENST00000468647 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.05
FRMD1-206ENST00000468647 CYB5RLQ6IPT4 315 aa15.33■□□□□ 0.05
FRMD1-206ENST00000468647 EIF4G2P78344 907 aaKnown RBP eCLIP15.33■□□□□ 0.04
FRMD1-206ENST00000468647 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
FRMD1-206ENST00000468647 CUL7Q14999 1698 aa15.32■□□□□ 0.04
FRMD1-206ENST00000468647 EFCAB5A4FU69 1503 aa15.31■□□□□ 0.04
FRMD1-206ENST00000468647 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
FRMD1-206ENST00000468647 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms