RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 EEA1Q15075 1411 aa33.48■■■□□ 2.95
NPHP4-206ENST00000468253 CYB5RLQ6IPT4 315 aa33.47■■■□□ 2.95
NPHP4-206ENST00000468253 KIAA0586Q9BVV6 1533 aa33.46■■■□□ 2.95
NPHP4-206ENST00000468253 PRXQ9BXM0 1461 aa33.4■■■□□ 2.94
NPHP4-206ENST00000468253 ARAP1Q96P48 1450 aa33.36■■■□□ 2.93
NPHP4-206ENST00000468253 SHROOM2Q13796 1616 aa33.34■■■□□ 2.93
NPHP4-206ENST00000468253 PRG4Q92954 1404 aaPredicted RBP33.32■■■□□ 2.92
NPHP4-206ENST00000468253 FAM9AQ8IZU1 332 aaPredicted RBP33.26■■■□□ 2.91
NPHP4-206ENST00000468253 ERCC6L2Q5T890 1561 aa33.2■■■□□ 2.91
NPHP4-206ENST00000468253 IQGAP2Q13576 1575 aa33.13■■■□□ 2.89
NPHP4-206ENST00000468253 CARMIL2Q6F5E8 1435 aa33.11■■■□□ 2.89
NPHP4-206ENST00000468253 UGGT2Q9NYU1 1516 aa33.05■■■□□ 2.88
NPHP4-206ENST00000468253 TNIKQ9UKE5 1360 aa33.02■■■□□ 2.88
NPHP4-206ENST00000468253 PTPRGP23470 1445 aa33■■■□□ 2.87
NPHP4-206ENST00000468253 DISP1Q96F81 1524 aa32.97■■■□□ 2.87
NPHP4-206ENST00000468253 KIF21BO75037 1637 aa32.95■■■□□ 2.86
NPHP4-206ENST00000468253 GOLGA3Q08378 1498 aa32.92■■■□□ 2.86
NPHP4-206ENST00000468253 CTTNBP2Q8WZ74 1663 aa32.88■■■□□ 2.85
NPHP4-206ENST00000468253 UBTFP17480 764 aaKnown RBP32.87■■■□□ 2.85
NPHP4-206ENST00000468253 NPM1P06748 294 aaKnown RBP eCLIP32.84■■■□□ 2.85
NPHP4-206ENST00000468253 TTBK1Q5TCY1 1321 aaPredicted RBP32.8■■■□□ 2.84
NPHP4-206ENST00000468253 KIAA0556O60303 1618 aa32.79■■■□□ 2.84
NPHP4-206ENST00000468253 UACAQ9BZF9 1416 aa32.75■■■□□ 2.83
NPHP4-206ENST00000468253 TRHP20396 242 aaPredicted RBP32.73■■■□□ 2.83
NPHP4-206ENST00000468253 EHMT2Q96KQ7 1210 aa32.73■■■□□ 2.83
NPHP4-206ENST00000468253 UHRF1BP1LA0JNW5 1464 aa32.72■■■□□ 2.83
NPHP4-206ENST00000468253 P3H3Q8IVL6 736 aa32.7■■■□□ 2.83
NPHP4-206ENST00000468253 ADCY10Q96PN6 1610 aa32.66■■■□□ 2.82
NPHP4-206ENST00000468253 RANGAP1P46060 587 aaPredicted RBP32.65■■■□□ 2.82
NPHP4-206ENST00000468253 ABCC2Q92887 1545 aa32.61■■■□□ 2.81
NPHP4-206ENST00000468253 SAMD9Q5K651 1589 aa32.61■■■□□ 2.81
NPHP4-206ENST00000468253 PLB1Q6P1J6 1458 aa32.54■■■□□ 2.8
NPHP4-206ENST00000468253 EFCAB5A4FU69 1503 aa32.54■■■□□ 2.8
NPHP4-206ENST00000468253 MAPKBP1O60336 1514 aa32.53■■■□□ 2.8
NPHP4-206ENST00000468253 KDM5BQ9UGL1 1544 aa32.52■■■□□ 2.8
NPHP4-206ENST00000468253 ABCA8O94911 1581 aa32.49■■■□□ 2.79
NPHP4-206ENST00000468253 FHOD3Q2V2M9 1422 aa32.48■■■□□ 2.79
NPHP4-206ENST00000468253 ABCC10Q5T3U5 1492 aa32.43■■■□□ 2.78
NPHP4-206ENST00000468253 FAM69CQ0P6D2 419 aa32.43■■■□□ 2.78
NPHP4-206ENST00000468253 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
NPHP4-206ENST00000468253 ASXL2Q76L83 1435 aa32.4■■■□□ 2.78
NPHP4-206ENST00000468253 FMN1Q68DA7 1419 aa32.34■■■□□ 2.77
NPHP4-206ENST00000468253 ATP10BO94823 1461 aa32.33■■■□□ 2.77
NPHP4-206ENST00000468253 LOC105371045A0A1W2PR82 267 aa32.32■■■□□ 2.76
NPHP4-206ENST00000468253 CLIP1P30622 1438 aa32.28■■■□□ 2.76
NPHP4-206ENST00000468253 ZCCHC11Q5TAX3 1644 aaKnown RBP32.28■■■□□ 2.76
NPHP4-206ENST00000468253 RAPGEF6Q8TEU7 1601 aa32.26■■■□□ 2.76
NPHP4-206ENST00000468253 NUP153P49790 1475 aaKnown RBP32.24■■■□□ 2.75
NPHP4-206ENST00000468253 ARID3CA6NKF2 412 aa32.24■■■□□ 2.75
NPHP4-206ENST00000468253 DIP2BQ9P265 1576 aa32.23■■■□□ 2.75
NPHP4-206ENST00000468253 WDR7Q9Y4E6 1490 aa32.23■■■□□ 2.75
NPHP4-206ENST00000468253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.21■■■□□ 2.75
NPHP4-206ENST00000468253 HNRNPUL2Q1KMD3 747 aaKnown RBP32.21■■■□□ 2.75
NPHP4-206ENST00000468253 EPRSP07814 1512 aaKnown RBP32.2■■■□□ 2.74
NPHP4-206ENST00000468253 GLI2P10070 1586 aa32.19■■■□□ 2.74
NPHP4-206ENST00000468253 KCNH8Q96L42 1107 aa32.18■■■□□ 2.74
NPHP4-206ENST00000468253 PLEKHD1A6NEE1 506 aa32.17■■■□□ 2.74
NPHP4-206ENST00000468253 KIF13AQ9H1H9 1805 aa32.16■■■□□ 2.74
NPHP4-206ENST00000468253 ATP1B4Q9UN42 357 aaPredicted RBP32.14■■■□□ 2.74
NPHP4-206ENST00000468253 CEP162Q5TB80 1403 aa32.12■■■□□ 2.73
NPHP4-206ENST00000468253 CDK11AQ9UQ88 783 aaPredicted RBP32.09■■■□□ 2.73
NPHP4-206ENST00000468253 CASKIN1Q8WXD9 1431 aa32.09■■■□□ 2.73
NPHP4-206ENST00000468253 HECW1Q76N89 1606 aa32■■■□□ 2.71
NPHP4-206ENST00000468253 CD109Q6YHK3 1445 aa32■■■□□ 2.71
NPHP4-206ENST00000468253 FYCO1Q9BQS8 1478 aa31.94■■■□□ 2.7
NPHP4-206ENST00000468253 CDK13Q14004 1512 aaKnown RBP31.94■■■□□ 2.7
NPHP4-206ENST00000468253 MAP3K4Q9Y6R4 1608 aa31.92■■■□□ 2.7
NPHP4-206ENST00000468253 TEX14Q8IWB6 1497 aa31.91■■■□□ 2.7
NPHP4-206ENST00000468253 MAGI3Q5TCQ9 1506 aa31.91■■■□□ 2.7
NPHP4-206ENST00000468253 CCDC18Q5T9S5 1454 aa31.9■■■□□ 2.7
NPHP4-206ENST00000468253 CFAP43Q8NDM7 1665 aa31.84■■■□□ 2.69
NPHP4-206ENST00000468253 PCF11O94913 1555 aaKnown RBP31.84■■■□□ 2.69
NPHP4-206ENST00000468253 TROQ12816 1431 aaPredicted RBP31.83■■■□□ 2.69
NPHP4-206ENST00000468253 TSPOAP1O95153 1857 aa31.83■■■□□ 2.69
NPHP4-206ENST00000468253 PHLDB1Q86UU1 1377 aa31.82■■■□□ 2.69
NPHP4-206ENST00000468253 ABCA9Q8IUA7 1624 aa31.82■■■□□ 2.69
NPHP4-206ENST00000468253 PPRC1Q5VV67 1664 aaKnown RBP31.8■■■□□ 2.68
NPHP4-206ENST00000468253 VPS8Q8N3P4 1428 aa31.75■■■□□ 2.67
NPHP4-206ENST00000468253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.74■■■□□ 2.67
NPHP4-206ENST00000468253 COL17A1Q9UMD9 1497 aaPredicted RBP31.7■■■□□ 2.66
NPHP4-206ENST00000468253 PLCH2O75038 1416 aa31.69■■■□□ 2.66
NPHP4-206ENST00000468253 NEO1Q92859 1461 aa31.69■■■□□ 2.66
NPHP4-206ENST00000468253 LRRIQ1Q96JM4 1722 aa31.69■■■□□ 2.66
NPHP4-206ENST00000468253 KDM6BO15054 1643 aa31.68■■■□□ 2.66
NPHP4-206ENST00000468253 EFCAB2Q5VUJ9 269 aa31.65■■■□□ 2.66
NPHP4-206ENST00000468253 ARAP3Q8WWN8 1544 aa31.65■■■□□ 2.66
NPHP4-206ENST00000468253 MTUS2Q5JR59 1369 aa31.63■■■□□ 2.65
NPHP4-206ENST00000468253 KIF14Q15058 1648 aa31.6■■■□□ 2.65
NPHP4-206ENST00000468253 TTC37Q6PGP7 1564 aa31.59■■■□□ 2.65
NPHP4-206ENST00000468253 AKNAQ7Z591 1439 aa31.58■■■□□ 2.65
NPHP4-206ENST00000468253 FANCAO15360 1455 aa31.58■■■□□ 2.65
NPHP4-206ENST00000468253 MAP3K1Q13233 1512 aa31.53■■■□□ 2.64
NPHP4-206ENST00000468253 RAPGEF3O95398 923 aa31.51■■■□□ 2.63
NPHP4-206ENST00000468253 APLP2Q06481 763 aa31.51■■■□□ 2.63
NPHP4-206ENST00000468253 DENND4BO75064 1496 aaPredicted RBP31.46■■■□□ 2.63
NPHP4-206ENST00000468253 CFAP74Q9C0B2 1584 aa31.45■■■□□ 2.63
NPHP4-206ENST00000468253 CCNB3Q8WWL7 1395 aa31.44■■■□□ 2.62
NPHP4-206ENST00000468253 TIAM1Q13009 1591 aa31.44■■■□□ 2.62
NPHP4-206ENST00000468253 EHBP1L1Q8N3D4 1523 aa31.44■■■□□ 2.62
NPHP4-206ENST00000468253 GPATCH8Q9UKJ3 1502 aaKnown RBP31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms