RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
PTMA-211ENST00000468027 RAPGEF2Q9Y4G8 1499 aa22.12■■□□□ 1.13
PTMA-211ENST00000468027 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
PTMA-211ENST00000468027 PRG4Q92954 1404 aaPredicted RBP22.1■■□□□ 1.13
PTMA-211ENST00000468027 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
PTMA-211ENST00000468027 CTTNBP2Q8WZ74 1663 aa22.08■■□□□ 1.13
PTMA-211ENST00000468027 IQGAP2Q13576 1575 aa22.06■■□□□ 1.12
PTMA-211ENST00000468027 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
PTMA-211ENST00000468027 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
PTMA-211ENST00000468027 EEA1Q15075 1411 aa21.96■■□□□ 1.11
PTMA-211ENST00000468027 DISP1Q96F81 1524 aa21.95■■□□□ 1.1
PTMA-211ENST00000468027 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
PTMA-211ENST00000468027 ADCY10Q96PN6 1610 aa21.91■■□□□ 1.1
PTMA-211ENST00000468027 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
PTMA-211ENST00000468027 KIF21BO75037 1637 aa21.87■■□□□ 1.09
PTMA-211ENST00000468027 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
PTMA-211ENST00000468027 KIF13AQ9H1H9 1805 aa21.83■■□□□ 1.09
PTMA-211ENST00000468027 TNIKQ9UKE5 1360 aa21.82■■□□□ 1.08
PTMA-211ENST00000468027 PTPRGP23470 1445 aa21.79■■□□□ 1.08
PTMA-211ENST00000468027 SAMD9Q5K651 1589 aa21.76■■□□□ 1.07
PTMA-211ENST00000468027 MAPKBP1O60336 1514 aa21.75■■□□□ 1.07
PTMA-211ENST00000468027 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
PTMA-211ENST00000468027 UHRF1BP1LA0JNW5 1464 aa21.74■■□□□ 1.07
PTMA-211ENST00000468027 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
PTMA-211ENST00000468027 ABCC2Q92887 1545 aa21.7■■□□□ 1.07
PTMA-211ENST00000468027 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
PTMA-211ENST00000468027 UACAQ9BZF9 1416 aa21.68■■□□□ 1.06
PTMA-211ENST00000468027 ABCA8O94911 1581 aa21.67■■□□□ 1.06
PTMA-211ENST00000468027 DIP2BQ9P265 1576 aa21.65■■□□□ 1.06
PTMA-211ENST00000468027 ZCCHC11Q5TAX3 1644 aaKnown RBP21.65■■□□□ 1.06
PTMA-211ENST00000468027 KDM5BQ9UGL1 1544 aa21.65■■□□□ 1.06
PTMA-211ENST00000468027 ABCC10Q5T3U5 1492 aa21.62■■□□□ 1.05
PTMA-211ENST00000468027 PLB1Q6P1J6 1458 aa21.62■■□□□ 1.05
PTMA-211ENST00000468027 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
PTMA-211ENST00000468027 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.043e-14■□□□□ 9
PTMA-211ENST00000468027 EFCAB5A4FU69 1503 aa21.55■■□□□ 1.04
PTMA-211ENST00000468027 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
PTMA-211ENST00000468027 RAPGEF6Q8TEU7 1601 aa21.52■■□□□ 1.04
PTMA-211ENST00000468027 GLI2P10070 1586 aa21.52■■□□□ 1.04
PTMA-211ENST00000468027 TSPOAP1O95153 1857 aa21.52■■□□□ 1.03
PTMA-211ENST00000468027 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
PTMA-211ENST00000468027 P3H3Q8IVL6 736 aa21.5■■□□□ 1.03
PTMA-211ENST00000468027 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
PTMA-211ENST00000468027 FAM69CQ0P6D2 419 aa21.46■■□□□ 1.03
PTMA-211ENST00000468027 MAP3K4Q9Y6R4 1608 aa21.45■■□□□ 1.02
PTMA-211ENST00000468027 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
PTMA-211ENST00000468027 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
PTMA-211ENST00000468027 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
PTMA-211ENST00000468027 ATP10BO94823 1461 aa21.43■■□□□ 1.02
PTMA-211ENST00000468027 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
PTMA-211ENST00000468027 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
PTMA-211ENST00000468027 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
PTMA-211ENST00000468027 RANGAP1P46060 587 aaPredicted RBP21.39■■□□□ 1.01
PTMA-211ENST00000468027 LRRIQ1Q96JM4 1722 aa21.38■■□□□ 1.01
PTMA-211ENST00000468027 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
PTMA-211ENST00000468027 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
PTMA-211ENST00000468027 FMN1Q68DA7 1419 aa21.28■■□□□ 1
PTMA-211ENST00000468027 KDM6BO15054 1643 aa21.27■■□□□ 1
PTMA-211ENST00000468027 HECW1Q76N89 1606 aa21.26■□□□□ 0.99
PTMA-211ENST00000468027 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
PTMA-211ENST00000468027 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
PTMA-211ENST00000468027 MAGI3Q5TCQ9 1506 aa21.23■□□□□ 0.99
PTMA-211ENST00000468027 PCF11O94913 1555 aaKnown RBP21.21■□□□□ 0.99
PTMA-211ENST00000468027 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
PTMA-211ENST00000468027 CLIP1P30622 1438 aa21.19■□□□□ 0.98
PTMA-211ENST00000468027 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
PTMA-211ENST00000468027 TEX14Q8IWB6 1497 aa21.19■□□□□ 0.98
PTMA-211ENST00000468027 COL17A1Q9UMD9 1497 aaPredicted RBP21.19■□□□□ 0.98
PTMA-211ENST00000468027 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
PTMA-211ENST00000468027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.985e-9■■■■□ 20.9
PTMA-211ENST00000468027 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
PTMA-211ENST00000468027 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
PTMA-211ENST00000468027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
PTMA-211ENST00000468027 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
PTMA-211ENST00000468027 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
PTMA-211ENST00000468027 KIF14Q15058 1648 aa21.09■□□□□ 0.97
PTMA-211ENST00000468027 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
PTMA-211ENST00000468027 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.97
PTMA-211ENST00000468027 ARAP3Q8WWN8 1544 aa21.07■□□□□ 0.96
PTMA-211ENST00000468027 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
PTMA-211ENST00000468027 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
PTMA-211ENST00000468027 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
PTMA-211ENST00000468027 NEO1Q92859 1461 aa21.02■□□□□ 0.96
PTMA-211ENST00000468027 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
PTMA-211ENST00000468027 ATP1B4Q9UN42 357 aaPredicted RBP21■□□□□ 0.95
PTMA-211ENST00000468027 FRMPD1Q5SYB0 1578 aa21■□□□□ 0.95
PTMA-211ENST00000468027 CFAP74Q9C0B2 1584 aa21■□□□□ 0.95
PTMA-211ENST00000468027 RICTORQ6R327 1708 aa21■□□□□ 0.95
PTMA-211ENST00000468027 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
PTMA-211ENST00000468027 CDC42BPAQ5VT25 1732 aa20.98■□□□□ 0.95
PTMA-211ENST00000468027 PLCH2O75038 1416 aa20.95■□□□□ 0.95
PTMA-211ENST00000468027 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
PTMA-211ENST00000468027 FANCAO15360 1455 aa20.94■□□□□ 0.94
PTMA-211ENST00000468027 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
PTMA-211ENST00000468027 AKNAQ7Z591 1439 aa20.91■□□□□ 0.94
PTMA-211ENST00000468027 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
PTMA-211ENST00000468027 ZMYM4Q5VZL5 1548 aa20.85■□□□□ 0.93
PTMA-211ENST00000468027 RAPGEF3O95398 923 aa20.84■□□□□ 0.93
PTMA-211ENST00000468027 TIAM1Q13009 1591 aa20.84■□□□□ 0.93
PTMA-211ENST00000468027 DENND4BO75064 1496 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms