RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 KIAA0586Q9BVV6 1533 aa31.6■■■□□ 2.65
YBX1-204ENST00000467957 JPH4Q96JJ6 628 aa31.59■■■□□ 2.65
YBX1-204ENST00000467957 RAPGEF2Q9Y4G8 1499 aa31.54■■■□□ 2.64
YBX1-204ENST00000467957 PRG4Q92954 1404 aaPredicted RBP31.53■■■□□ 2.64
YBX1-204ENST00000467957 PRXQ9BXM0 1461 aa31.41■■■□□ 2.62
YBX1-204ENST00000467957 IQGAP2Q13576 1575 aa31.39■■■□□ 2.61
YBX1-204ENST00000467957 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
YBX1-204ENST00000467957 EEA1Q15075 1411 aa31.37■■■□□ 2.61
YBX1-204ENST00000467957 CSRNP3Q8WYN3 585 aa31.32■■■□□ 2.6
YBX1-204ENST00000467957 CARMIL2Q6F5E8 1435 aa31.25■■■□□ 2.59
YBX1-204ENST00000467957 CTTNBP2Q8WZ74 1663 aa31.25■■■□□ 2.59
YBX1-204ENST00000467957 UGGT2Q9NYU1 1516 aa31.24■■■□□ 2.59
YBX1-204ENST00000467957 DISP1Q96F81 1524 aa31.19■■■□□ 2.58
YBX1-204ENST00000467957 TNIKQ9UKE5 1360 aa31.16■■■□□ 2.58
YBX1-204ENST00000467957 PTPRGP23470 1445 aa31.15■■■□□ 2.58
YBX1-204ENST00000467957 TRHP20396 242 aaPredicted RBP31.12■■■□□ 2.57
YBX1-204ENST00000467957 FAM9AQ8IZU1 332 aaPredicted RBP31.1■■■□□ 2.57
YBX1-204ENST00000467957 KIAA0556O60303 1618 aa31.09■■■□□ 2.57
YBX1-204ENST00000467957 ADCY10Q96PN6 1610 aa31.09■■■□□ 2.57
YBX1-204ENST00000467957 KIF21BO75037 1637 aa31.05■■■□□ 2.56
YBX1-204ENST00000467957 GOLGA3Q08378 1498 aa31.04■■■□□ 2.56
YBX1-204ENST00000467957 NPM1P06748 294 aaKnown RBP eCLIP30.99■■■□□ 2.55
YBX1-204ENST00000467957 TTBK1Q5TCY1 1321 aaPredicted RBP30.97■■■□□ 2.55
YBX1-204ENST00000467957 UHRF1BP1LA0JNW5 1464 aa30.96■■■□□ 2.55
YBX1-204ENST00000467957 MAPKBP1O60336 1514 aa30.95■■■□□ 2.55
YBX1-204ENST00000467957 UACAQ9BZF9 1416 aa30.94■■■□□ 2.54
YBX1-204ENST00000467957 ABCC2Q92887 1545 aa30.9■■■□□ 2.54
YBX1-204ENST00000467957 SAMD9Q5K651 1589 aa30.86■■■□□ 2.53
YBX1-204ENST00000467957 KIF13AQ9H1H9 1805 aa30.82■■■□□ 2.52
YBX1-204ENST00000467957 ABCC10Q5T3U5 1492 aa30.81■■■□□ 2.52
YBX1-204ENST00000467957 KDM5BQ9UGL1 1544 aa30.8■■■□□ 2.52
YBX1-204ENST00000467957 PLB1Q6P1J6 1458 aa30.78■■■□□ 2.52
YBX1-204ENST00000467957 ABCA8O94911 1581 aa30.78■■■□□ 2.52
YBX1-204ENST00000467957 DIP2BQ9P265 1576 aa30.75■■■□□ 2.51
YBX1-204ENST00000467957 P3H3Q8IVL6 736 aa30.74■■■□□ 2.51
YBX1-204ENST00000467957 UBTFP17480 764 aaKnown RBP30.72■■■□□ 2.51
YBX1-204ENST00000467957 ZCCHC11Q5TAX3 1644 aaKnown RBP30.71■■■□□ 2.51
YBX1-204ENST00000467957 EFCAB5A4FU69 1503 aa30.7■■■□□ 2.51
YBX1-204ENST00000467957 FAM69CQ0P6D2 419 aa30.7■■■□□ 2.51
YBX1-204ENST00000467957 ASXL2Q76L83 1435 aa30.7■■■□□ 2.5
YBX1-204ENST00000467957 RANGAP1P46060 587 aaPredicted RBP30.66■■■□□ 2.5
YBX1-204ENST00000467957 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
YBX1-204ENST00000467957 FHOD3Q2V2M9 1422 aa30.62■■■□□ 2.49
YBX1-204ENST00000467957 GLI2P10070 1586 aa30.58■■■□□ 2.49
YBX1-204ENST00000467957 RAPGEF6Q8TEU7 1601 aa30.57■■■□□ 2.48
YBX1-204ENST00000467957 EPRSP07814 1512 aaKnown RBP30.53■■■□□ 2.48
YBX1-204ENST00000467957 WDR7Q9Y4E6 1490 aa30.53■■■□□ 2.48
YBX1-204ENST00000467957 ATP10BO94823 1461 aa30.51■■■□□ 2.48
YBX1-204ENST00000467957 ARHGAP35Q9NRY4 1499 aa30.5■■■□□ 2.47
YBX1-204ENST00000467957 NUP153P49790 1475 aaKnown RBP30.46■■■□□ 2.47
YBX1-204ENST00000467957 TSPOAP1O95153 1857 aa30.44■■■□□ 2.46
YBX1-204ENST00000467957 MAP3K4Q9Y6R4 1608 aa30.42■■■□□ 2.46
YBX1-204ENST00000467957 FMN1Q68DA7 1419 aa30.4■■■□□ 2.46
YBX1-204ENST00000467957 ARID3CA6NKF2 412 aa30.4■■■□□ 2.46
YBX1-204ENST00000467957 PPRC1Q5VV67 1664 aaKnown RBP30.38■■■□□ 2.45
YBX1-204ENST00000467957 KCNH8Q96L42 1107 aa30.34■■■□□ 2.45
YBX1-204ENST00000467957 CFAP43Q8NDM7 1665 aa30.32■■■□□ 2.44
YBX1-204ENST00000467957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.3■■■□□ 2.44
YBX1-204ENST00000467957 HNRNPUL2Q1KMD3 747 aaKnown RBP30.3■■■□□ 2.44
YBX1-204ENST00000467957 TEX14Q8IWB6 1497 aa30.28■■■□□ 2.44
YBX1-204ENST00000467957 KDM6BO15054 1643 aa30.28■■■□□ 2.44
YBX1-204ENST00000467957 HECW1Q76N89 1606 aa30.26■■■□□ 2.44
YBX1-204ENST00000467957 CD109Q6YHK3 1445 aa30.26■■■□□ 2.43
YBX1-204ENST00000467957 CLIP1P30622 1438 aa30.25■■■□□ 2.43
YBX1-204ENST00000467957 MAGI3Q5TCQ9 1506 aa30.25■■■□□ 2.43
YBX1-204ENST00000467957 ABCA9Q8IUA7 1624 aa30.22■■■□□ 2.43
YBX1-204ENST00000467957 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
YBX1-204ENST00000467957 CDK13Q14004 1512 aaKnown RBP30.2■■■□□ 2.42
YBX1-204ENST00000467957 CASKIN1Q8WXD9 1431 aa30.15■■■□□ 2.42
YBX1-204ENST00000467957 ATP1B4Q9UN42 357 aaPredicted RBP30.15■■■□□ 2.42
YBX1-204ENST00000467957 PCF11O94913 1555 aaKnown RBP30.11■■■□□ 2.41
YBX1-204ENST00000467957 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
YBX1-204ENST00000467957 LRRIQ1Q96JM4 1722 aa30.1■■■□□ 2.41
YBX1-204ENST00000467957 CEP162Q5TB80 1403 aa30.08■■■□□ 2.41
YBX1-204ENST00000467957 CDK11AQ9UQ88 783 aaPredicted RBP30.08■■■□□ 2.41
YBX1-204ENST00000467957 FYCO1Q9BQS8 1478 aa30.07■■■□□ 2.4
YBX1-204ENST00000467957 LOC105371045A0A1W2PR82 267 aa30.05■■■□□ 2.4
YBX1-204ENST00000467957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.05■■■□□ 2.4
YBX1-204ENST00000467957 CCDC18Q5T9S5 1454 aa30.05■■■□□ 2.4
YBX1-204ENST00000467957 PHLDB1Q86UU1 1377 aa30.03■■■□□ 2.4
YBX1-204ENST00000467957 NEO1Q92859 1461 aa29.99■■■□□ 2.39
YBX1-204ENST00000467957 TROQ12816 1431 aaPredicted RBP29.99■■■□□ 2.39
YBX1-204ENST00000467957 ARAP3Q8WWN8 1544 aa29.99■■■□□ 2.39
YBX1-204ENST00000467957 TTC37Q6PGP7 1564 aa29.98■■■□□ 2.39
YBX1-204ENST00000467957 KIF14Q15058 1648 aa29.93■■■□□ 2.38
YBX1-204ENST00000467957 CFAP74Q9C0B2 1584 aa29.9■■■□□ 2.38
YBX1-204ENST00000467957 PLCH2O75038 1416 aa29.88■■■□□ 2.37
YBX1-204ENST00000467957 FANCAO15360 1455 aa29.87■■■□□ 2.37
YBX1-204ENST00000467957 AKNAQ7Z591 1439 aa29.84■■■□□ 2.37
YBX1-204ENST00000467957 MYO5CQ9NQX4 1742 aa29.84■■■□□ 2.37
YBX1-204ENST00000467957 RAPGEF3O95398 923 aa29.76■■■□□ 2.35
YBX1-204ENST00000467957 FRMPD1Q5SYB0 1578 aa29.76■■■□□ 2.35
YBX1-204ENST00000467957 DENND4BO75064 1496 aaPredicted RBP29.75■■■□□ 2.35
YBX1-204ENST00000467957 EFCAB2Q5VUJ9 269 aa29.75■■■□□ 2.35
YBX1-204ENST00000467957 VPS8Q8N3P4 1428 aa29.75■■■□□ 2.35
YBX1-204ENST00000467957 RICTORQ6R327 1708 aa29.73■■■□□ 2.35
YBX1-204ENST00000467957 ADGRL1O94910 1474 aa29.71■■■□□ 2.35
YBX1-204ENST00000467957 CDC42BPBQ9Y5S2 1711 aa29.7■■■□□ 2.34
YBX1-204ENST00000467957 PREX2Q70Z35 1606 aa29.7■■■□□ 2.34
YBX1-204ENST00000467957 ARHGAP5Q13017 1502 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms