RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NUP160Q12769 1436 aa11.11□□□□□ -0.63
SCAF4-204ENST00000467731 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
SCAF4-204ENST00000467731 IQGAP2Q13576 1575 aa11.07□□□□□ -0.64
SCAF4-204ENST00000467731 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
SCAF4-204ENST00000467731 RANGAP1P46060 587 aaPredicted RBP11.05□□□□□ -0.64
SCAF4-204ENST00000467731 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
SCAF4-204ENST00000467731 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
SCAF4-204ENST00000467731 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
SCAF4-204ENST00000467731 CLIP1P30622 1438 aa11.01□□□□□ -0.65
SCAF4-204ENST00000467731 UGGT2Q9NYU1 1516 aa11□□□□□ -0.65
SCAF4-204ENST00000467731 JPH4Q96JJ6 628 aa11□□□□□ -0.65
SCAF4-204ENST00000467731 SHROOM2Q13796 1616 aa11□□□□□ -0.65
SCAF4-204ENST00000467731 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
SCAF4-204ENST00000467731 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
SCAF4-204ENST00000467731 SAMD9Q5K651 1589 aa10.98□□□□□ -0.65
SCAF4-204ENST00000467731 EFCAB5A4FU69 1503 aa10.97□□□□□ -0.65
SCAF4-204ENST00000467731 DISP1Q96F81 1524 aa10.97□□□□□ -0.65
SCAF4-204ENST00000467731 KIAA0556O60303 1618 aa10.96□□□□□ -0.65
SCAF4-204ENST00000467731 PRG4Q92954 1404 aaPredicted RBP10.96□□□□□ -0.66
SCAF4-204ENST00000467731 P3H3Q8IVL6 736 aa10.96□□□□□ -0.66
SCAF4-204ENST00000467731 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
SCAF4-204ENST00000467731 FHOD3Q2V2M9 1422 aa10.94□□□□□ -0.66
SCAF4-204ENST00000467731 ARAP1Q96P48 1450 aa10.94□□□□□ -0.66
SCAF4-204ENST00000467731 CARMIL2Q6F5E8 1435 aa10.94□□□□□ -0.66
SCAF4-204ENST00000467731 TTBK1Q5TCY1 1321 aaPredicted RBP10.9□□□□□ -0.67
SCAF4-204ENST00000467731 ARHGEF11O15085 1522 aa10.88□□□□□ -0.67
SCAF4-204ENST00000467731 MYT1Q01538 1121 aa10.88□□□□□ -0.67
SCAF4-204ENST00000467731 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
SCAF4-204ENST00000467731 FMN1Q68DA7 1419 aa10.87□□□□□ -0.67
SCAF4-204ENST00000467731 PTPRGP23470 1445 aa10.86□□□□□ -0.67
SCAF4-204ENST00000467731 RIMBP3CA6NJZ7 1639 aa10.85□□□□□ -0.67
SCAF4-204ENST00000467731 RIMBP3BA6NNM3 1639 aa10.85□□□□□ -0.67
SCAF4-204ENST00000467731 RIMBP3Q9UFD9 1639 aa10.85□□□□□ -0.67
SCAF4-204ENST00000467731 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
SCAF4-204ENST00000467731 PLB1Q6P1J6 1458 aa10.83□□□□□ -0.68
SCAF4-204ENST00000467731 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
SCAF4-204ENST00000467731 CASKIN1Q8WXD9 1431 aa10.81□□□□□ -0.68
SCAF4-204ENST00000467731 ABCA8O94911 1581 aa10.81□□□□□ -0.68
SCAF4-204ENST00000467731 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
SCAF4-204ENST00000467731 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
SCAF4-204ENST00000467731 ATP1B4Q9UN42 357 aaPredicted RBP10.8□□□□□ -0.68
SCAF4-204ENST00000467731 HECW1Q76N89 1606 aa10.8□□□□□ -0.68
SCAF4-204ENST00000467731 UACAQ9BZF9 1416 aa10.79□□□□□ -0.68
SCAF4-204ENST00000467731 NUP153P49790 1475 aaKnown RBP10.78□□□□□ -0.68
SCAF4-204ENST00000467731 ABCC2Q92887 1545 aa10.78□□□□□ -0.68
SCAF4-204ENST00000467731 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.69
SCAF4-204ENST00000467731 ARID3CA6NKF2 412 aa10.77□□□□□ -0.69
SCAF4-204ENST00000467731 CYB5RLQ6IPT4 315 aa10.77□□□□□ -0.69
SCAF4-204ENST00000467731 DNAJC5Q9H3Z4 198 aa10.76□□□□□ -0.69
SCAF4-204ENST00000467731 EPRSP07814 1512 aaKnown RBP10.76□□□□□ -0.69
SCAF4-204ENST00000467731 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
SCAF4-204ENST00000467731 CDK13Q14004 1512 aaKnown RBP10.75□□□□□ -0.69
SCAF4-204ENST00000467731 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
SCAF4-204ENST00000467731 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
SCAF4-204ENST00000467731 APLP2Q06481 763 aa10.74□□□□□ -0.69
SCAF4-204ENST00000467731 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
SCAF4-204ENST00000467731 ATP10BO94823 1461 aa10.72□□□□□ -0.69
SCAF4-204ENST00000467731 ZCCHC11Q5TAX3 1644 aaKnown RBP10.72□□□□□ -0.69
SCAF4-204ENST00000467731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
SCAF4-204ENST00000467731 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
SCAF4-204ENST00000467731 KDM5BQ9UGL1 1544 aa10.72□□□□□ -0.69
SCAF4-204ENST00000467731 MAP3K1Q13233 1512 aa10.71□□□□□ -0.69
SCAF4-204ENST00000467731 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
SCAF4-204ENST00000467731 KANK4Q5T7N3 995 aaPredicted RBP10.7□□□□□ -0.7
SCAF4-204ENST00000467731 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
SCAF4-204ENST00000467731 LRRC9Q6ZRR7 1453 aa10.68□□□□□ -0.7
SCAF4-204ENST00000467731 MTUS2Q5JR59 1369 aa10.67□□□□□ -0.7
SCAF4-204ENST00000467731 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCAF4-204ENST00000467731 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
SCAF4-204ENST00000467731 EHBP1L1Q8N3D4 1523 aa10.66□□□□□ -0.7
SCAF4-204ENST00000467731 PLEKHD1A6NEE1 506 aa10.65□□□□□ -0.7
SCAF4-204ENST00000467731 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
SCAF4-204ENST00000467731 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
SCAF4-204ENST00000467731 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
SCAF4-204ENST00000467731 WDR7Q9Y4E6 1490 aa10.63□□□□□ -0.71
SCAF4-204ENST00000467731 KIF14Q15058 1648 aa10.63□□□□□ -0.71
SCAF4-204ENST00000467731 MAPKBP1O60336 1514 aa10.62□□□□□ -0.71
SCAF4-204ENST00000467731 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
SCAF4-204ENST00000467731 NCOA2Q15596 1464 aa10.6□□□□□ -0.71
SCAF4-204ENST00000467731 TTC37Q6PGP7 1564 aa10.58□□□□□ -0.72
SCAF4-204ENST00000467731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCAF4-204ENST00000467731 PHLDB1Q86UU1 1377 aa10.57□□□□□ -0.72
SCAF4-204ENST00000467731 ABCC10Q5T3U5 1492 aa10.57□□□□□ -0.72
SCAF4-204ENST00000467731 CDC42BPAQ5VT25 1732 aa10.56□□□□□ -0.72
SCAF4-204ENST00000467731 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
SCAF4-204ENST00000467731 DIP2BQ9P265 1576 aa10.55□□□□□ -0.72
SCAF4-204ENST00000467731 MYO5CQ9NQX4 1742 aa10.55□□□□□ -0.72
SCAF4-204ENST00000467731 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
SCAF4-204ENST00000467731 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
SCAF4-204ENST00000467731 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
SCAF4-204ENST00000467731 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
SCAF4-204ENST00000467731 KIF13AQ9H1H9 1805 aa10.53□□□□□ -0.72
SCAF4-204ENST00000467731 CDC42BPBQ9Y5S2 1711 aa10.53□□□□□ -0.72
SCAF4-204ENST00000467731 PREX2Q70Z35 1606 aa10.53□□□□□ -0.72
SCAF4-204ENST00000467731 GLI2P10070 1586 aa10.52□□□□□ -0.73
SCAF4-204ENST00000467731 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
SCAF4-204ENST00000467731 FAM69CQ0P6D2 419 aa10.51□□□□□ -0.73
SCAF4-204ENST00000467731 MAP3K4Q9Y6R4 1608 aa10.5□□□□□ -0.73
SCAF4-204ENST00000467731 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
SCAF4-204ENST00000467731 CFDP1Q9UEE9 299 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms