RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
MSH5-212ENST00000467319 KIAA0586Q9BVV6 1533 aa18.61■□□□□ 0.57
MSH5-212ENST00000467319 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
MSH5-212ENST00000467319 ERCC6L2Q5T890 1561 aa18.56■□□□□ 0.56
MSH5-212ENST00000467319 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
MSH5-212ENST00000467319 KIF21BO75037 1637 aa18.54■□□□□ 0.56
MSH5-212ENST00000467319 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
MSH5-212ENST00000467319 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
MSH5-212ENST00000467319 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
MSH5-212ENST00000467319 PRG4Q92954 1404 aaPredicted RBP18.48■□□□□ 0.55
MSH5-212ENST00000467319 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
MSH5-212ENST00000467319 DISP1Q96F81 1524 aa18.41■□□□□ 0.54
MSH5-212ENST00000467319 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
MSH5-212ENST00000467319 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
MSH5-212ENST00000467319 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
MSH5-212ENST00000467319 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
MSH5-212ENST00000467319 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
MSH5-212ENST00000467319 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
MSH5-212ENST00000467319 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
MSH5-212ENST00000467319 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
MSH5-212ENST00000467319 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
MSH5-212ENST00000467319 PTPRGP23470 1445 aa18.24■□□□□ 0.51
MSH5-212ENST00000467319 UHRF1BP1LA0JNW5 1464 aa18.21■□□□□ 0.51
MSH5-212ENST00000467319 ABCC2Q92887 1545 aa18.2■□□□□ 0.5
MSH5-212ENST00000467319 ABCA8O94911 1581 aa18.18■□□□□ 0.5
MSH5-212ENST00000467319 UACAQ9BZF9 1416 aa18.16■□□□□ 0.5
MSH5-212ENST00000467319 MAPKBP1O60336 1514 aa18.15■□□□□ 0.5
MSH5-212ENST00000467319 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.5
MSH5-212ENST00000467319 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
MSH5-212ENST00000467319 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.49
MSH5-212ENST00000467319 FHOD3Q2V2M9 1422 aa18.13■□□□□ 0.49
MSH5-212ENST00000467319 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
MSH5-212ENST00000467319 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
MSH5-212ENST00000467319 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
MSH5-212ENST00000467319 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
MSH5-212ENST00000467319 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
MSH5-212ENST00000467319 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
MSH5-212ENST00000467319 DIP2BQ9P265 1576 aa18.03■□□□□ 0.48
MSH5-212ENST00000467319 NUP153P49790 1475 aaKnown RBP18.02■□□□□ 0.48
MSH5-212ENST00000467319 CLIP1P30622 1438 aa18.02■□□□□ 0.48
MSH5-212ENST00000467319 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.47
MSH5-212ENST00000467319 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
MSH5-212ENST00000467319 FMN1Q68DA7 1419 aa18■□□□□ 0.47
MSH5-212ENST00000467319 ABCC10Q5T3U5 1492 aa18■□□□□ 0.47
MSH5-212ENST00000467319 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
MSH5-212ENST00000467319 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
MSH5-212ENST00000467319 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
MSH5-212ENST00000467319 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
MSH5-212ENST00000467319 ATP10BO94823 1461 aa17.96■□□□□ 0.47
MSH5-212ENST00000467319 PCF11O94913 1555 aaKnown RBP17.96■□□□□ 0.46
MSH5-212ENST00000467319 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
MSH5-212ENST00000467319 GLI2P10070 1586 aa17.94■□□□□ 0.46
MSH5-212ENST00000467319 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
MSH5-212ENST00000467319 CASKIN1Q8WXD9 1431 aa17.9■□□□□ 0.46
MSH5-212ENST00000467319 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
MSH5-212ENST00000467319 LRRIQ1Q96JM4 1722 aa17.9■□□□□ 0.46
MSH5-212ENST00000467319 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
MSH5-212ENST00000467319 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
MSH5-212ENST00000467319 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
MSH5-212ENST00000467319 MAP3K4Q9Y6R4 1608 aa17.87■□□□□ 0.45
MSH5-212ENST00000467319 PPRC1Q5VV67 1664 aaKnown RBP17.84■□□□□ 0.45
MSH5-212ENST00000467319 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.45
MSH5-212ENST00000467319 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
MSH5-212ENST00000467319 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
MSH5-212ENST00000467319 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
MSH5-212ENST00000467319 ABCA9Q8IUA7 1624 aa17.82■□□□□ 0.44
MSH5-212ENST00000467319 VPS8Q8N3P4 1428 aa17.77■□□□□ 0.44
MSH5-212ENST00000467319 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
MSH5-212ENST00000467319 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
MSH5-212ENST00000467319 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
MSH5-212ENST00000467319 TROQ12816 1431 aaPredicted RBP17.73■□□□□ 0.43
MSH5-212ENST00000467319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
MSH5-212ENST00000467319 KIF14Q15058 1648 aa17.72■□□□□ 0.43
MSH5-212ENST00000467319 TEX14Q8IWB6 1497 aa17.71■□□□□ 0.43
MSH5-212ENST00000467319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
MSH5-212ENST00000467319 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
MSH5-212ENST00000467319 CD109Q6YHK3 1445 aa17.7■□□□□ 0.42
MSH5-212ENST00000467319 PLEKHD1A6NEE1 506 aa17.69■□□□□ 0.42
MSH5-212ENST00000467319 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
MSH5-212ENST00000467319 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
MSH5-212ENST00000467319 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
MSH5-212ENST00000467319 KDM6BO15054 1643 aa17.65■□□□□ 0.42
MSH5-212ENST00000467319 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
MSH5-212ENST00000467319 MAP3K1Q13233 1512 aa17.65■□□□□ 0.42
MSH5-212ENST00000467319 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
MSH5-212ENST00000467319 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
MSH5-212ENST00000467319 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.41
MSH5-212ENST00000467319 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
MSH5-212ENST00000467319 NEO1Q92859 1461 aa17.62■□□□□ 0.41
MSH5-212ENST00000467319 PREX2Q70Z35 1606 aa17.61■□□□□ 0.41
MSH5-212ENST00000467319 COL17A1Q9UMD9 1497 aaPredicted RBP17.6■□□□□ 0.41
MSH5-212ENST00000467319 PLCH2O75038 1416 aa17.58■□□□□ 0.41
MSH5-212ENST00000467319 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.4
MSH5-212ENST00000467319 FANCAO15360 1455 aa17.57■□□□□ 0.4
MSH5-212ENST00000467319 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
MSH5-212ENST00000467319 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
MSH5-212ENST00000467319 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
MSH5-212ENST00000467319 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
MSH5-212ENST00000467319 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
MSH5-212ENST00000467319 SUPT6HQ7KZ85 1726 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms