RNA–Protein interactions for RNA: ENST00000467307.1

USP30-204, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 3

Gene USP30, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-204ENST00000467307 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
USP30-204ENST00000467307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
USP30-204ENST00000467307 NCAPD3P42695 1498 aa9.83□□□□□ -0.84
USP30-204ENST00000467307 RRBP1Q9P2E9 1410 aaKnown RBP9.81□□□□□ -0.84
USP30-204ENST00000467307 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
USP30-204ENST00000467307 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
USP30-204ENST00000467307 KIF27Q86VH2 1401 aa9.79□□□□□ -0.84
USP30-204ENST00000467307 NEUROD1Q13562 356 aa9.76□□□□□ -0.85
USP30-204ENST00000467307 RAPGEF2Q9Y4G8 1499 aa9.75□□□□□ -0.85
USP30-204ENST00000467307 CHRDL2Q6WN34 429 aa9.75□□□□□ -0.85
USP30-204ENST00000467307 RUSC2Q8N2Y8 1516 aa9.75□□□□□ -0.85
USP30-204ENST00000467307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP30-204ENST00000467307 CFTRP13569 1480 aa9.74□□□□□ -0.85
USP30-204ENST00000467307 GTF3C3Q9Y5Q9 886 aa9.71□□□□□ -0.86
USP30-204ENST00000467307 FHAD1B1AJZ9 1412 aa9.71□□□□□ -0.86
USP30-204ENST00000467307 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
USP30-204ENST00000467307 ARAP1Q96P48 1450 aa9.69□□□□□ -0.86
USP30-204ENST00000467307 SLC4A1APQ9BWU0 796 aaKnown RBP9.69□□□□□ -0.86
USP30-204ENST00000467307 DHX57Q6P158 1386 aaKnown RBP9.68□□□□□ -0.86
USP30-204ENST00000467307 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
USP30-204ENST00000467307 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
USP30-204ENST00000467307 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
USP30-204ENST00000467307 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP30-204ENST00000467307 CUX1P39880 1505 aa9.63□□□□□ -0.87
USP30-204ENST00000467307 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
USP30-204ENST00000467307 TTBK1Q5TCY1 1321 aaPredicted RBP9.62□□□□□ -0.87
USP30-204ENST00000467307 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
USP30-204ENST00000467307 SP7Q8TDD2 431 aaPredicted RBP9.61□□□□□ -0.87
USP30-204ENST00000467307 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
USP30-204ENST00000467307 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
USP30-204ENST00000467307 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
USP30-204ENST00000467307 POLA2Q14181 598 aa9.59□□□□□ -0.87
USP30-204ENST00000467307 THOC2Q8NI27 1593 aaKnown RBP9.58□□□□□ -0.88
USP30-204ENST00000467307 CUL7Q14999 1698 aa9.58□□□□□ -0.88
USP30-204ENST00000467307 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
USP30-204ENST00000467307 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
USP30-204ENST00000467307 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
USP30-204ENST00000467307 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
USP30-204ENST00000467307 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
USP30-204ENST00000467307 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
USP30-204ENST00000467307 MIER1Q8N108 512 aa9.55□□□□□ -0.88
USP30-204ENST00000467307 KIF21AQ7Z4S6 1674 aa9.55□□□□□ -0.88
USP30-204ENST00000467307 FMN1Q68DA7 1419 aa9.54□□□□□ -0.88
USP30-204ENST00000467307 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
USP30-204ENST00000467307 IGF1RP08069 1367 aa9.53□□□□□ -0.88
USP30-204ENST00000467307 CCER2I3L3R5 266 aa9.53□□□□□ -0.88
USP30-204ENST00000467307 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.88
USP30-204ENST00000467307 ABCA10Q8WWZ4 1543 aa9.52□□□□□ -0.88
USP30-204ENST00000467307 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP30-204ENST00000467307 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
USP30-204ENST00000467307 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
USP30-204ENST00000467307 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
USP30-204ENST00000467307 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
USP30-204ENST00000467307 ERICH6BQ5W0A0 696 aa9.49□□□□□ -0.89
USP30-204ENST00000467307 MAPKBP1O60336 1514 aa9.49□□□□□ -0.89
USP30-204ENST00000467307 RAB3GAP2Q9H2M9 1393 aa9.49□□□□□ -0.89
USP30-204ENST00000467307 CCDC18Q5T9S5 1454 aa9.47□□□□□ -0.89
USP30-204ENST00000467307 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
USP30-204ENST00000467307 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
USP30-204ENST00000467307 HFM1A2PYH4 1435 aa9.45□□□□□ -0.9
USP30-204ENST00000467307 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
USP30-204ENST00000467307 UACAQ9BZF9 1416 aa9.44□□□□□ -0.9
USP30-204ENST00000467307 WDR97A6NE52 1622 aa9.43□□□□□ -0.9
USP30-204ENST00000467307 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
USP30-204ENST00000467307 EHBP1L1Q8N3D4 1523 aa9.42□□□□□ -0.9
USP30-204ENST00000467307 AKT1S1Q96B36 256 aa9.42□□□□□ -0.9
USP30-204ENST00000467307 SUPT16HQ9Y5B9 1047 aaKnown RBP9.42□□□□□ -0.9
USP30-204ENST00000467307 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
USP30-204ENST00000467307 SAMD9Q5K651 1589 aa9.41□□□□□ -0.9
USP30-204ENST00000467307 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
USP30-204ENST00000467307 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.91
USP30-204ENST00000467307 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
USP30-204ENST00000467307 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
USP30-204ENST00000467307 SUPT6HQ7KZ85 1726 aaKnown RBP9.39□□□□□ -0.91
USP30-204ENST00000467307 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
USP30-204ENST00000467307 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
USP30-204ENST00000467307 NEFLP07196 543 aa9.38□□□□□ -0.91
USP30-204ENST00000467307 TCOF1Q13428 1488 aaKnown RBP9.38□□□□□ -0.91
USP30-204ENST00000467307 SNAPC4Q5SXM2 1469 aa9.38□□□□□ -0.91
USP30-204ENST00000467307 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
USP30-204ENST00000467307 HAX1O00165 279 aa9.37□□□□□ -0.91
USP30-204ENST00000467307 ANP32CO43423 234 aa9.37□□□□□ -0.91
USP30-204ENST00000467307 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
USP30-204ENST00000467307 YTHDC1Q96MU7 727 aaKnown RBP9.37□□□□□ -0.91
USP30-204ENST00000467307 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
USP30-204ENST00000467307 MYOM3Q5VTT5 1437 aa9.36□□□□□ -0.91
USP30-204ENST00000467307 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
USP30-204ENST00000467307 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
USP30-204ENST00000467307 GCC2Q8IWJ2 1684 aa9.35□□□□□ -0.91
USP30-204ENST00000467307 TONSLQ96HA7 1378 aa9.35□□□□□ -0.91
USP30-204ENST00000467307 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
USP30-204ENST00000467307 ABCA5Q8WWZ7 1642 aa9.34□□□□□ -0.91
USP30-204ENST00000467307 PTPN23Q9H3S7 1636 aa9.34□□□□□ -0.91
USP30-204ENST00000467307 ZBTB22O15209 634 aa9.33□□□□□ -0.92
USP30-204ENST00000467307 GRIN2BQ13224 1484 aa9.33□□□□□ -0.92
USP30-204ENST00000467307 EVX2Q03828 476 aa9.32□□□□□ -0.92
USP30-204ENST00000467307 ROCK1Q13464 1354 aa9.32□□□□□ -0.92
USP30-204ENST00000467307 MTUS2Q5JR59 1369 aa9.32□□□□□ -0.92
USP30-204ENST00000467307 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
USP30-204ENST00000467307 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms