RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 KIAA0586Q9BVV6 1533 aa21.49■■□□□ 1.03
SEC22A-203ENST00000466950 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
SEC22A-203ENST00000466950 FBLN2P98095 1184 aa21.44■■□□□ 1.02
SEC22A-203ENST00000466950 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
SEC22A-203ENST00000466950 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
SEC22A-203ENST00000466950 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
SEC22A-203ENST00000466950 UGGT2Q9NYU1 1516 aa21.4■■□□□ 1.02
SEC22A-203ENST00000466950 SAMD9Q5K651 1589 aa21.39■■□□□ 1.01
SEC22A-203ENST00000466950 EFCAB5A4FU69 1503 aa21.39■■□□□ 1.01
SEC22A-203ENST00000466950 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
SEC22A-203ENST00000466950 CEP162Q5TB80 1403 aa21.34■■□□□ 1.01
SEC22A-203ENST00000466950 KIAA0556O60303 1618 aa21.3■■□□□ 1
SEC22A-203ENST00000466950 CLIP1P30622 1438 aa21.29■■□□□ 1
SEC22A-203ENST00000466950 OSCARQ8IYS5 282 aa21.29■■□□□ 1
SEC22A-203ENST00000466950 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
SEC22A-203ENST00000466950 DISP1Q96F81 1524 aa21.26■□□□□ 0.99
SEC22A-203ENST00000466950 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
SEC22A-203ENST00000466950 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
SEC22A-203ENST00000466950 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SEC22A-203ENST00000466950 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
SEC22A-203ENST00000466950 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.98
SEC22A-203ENST00000466950 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
SEC22A-203ENST00000466950 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
SEC22A-203ENST00000466950 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
SEC22A-203ENST00000466950 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
SEC22A-203ENST00000466950 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.97
SEC22A-203ENST00000466950 RIMBP3CA6NJZ7 1639 aa21.06■□□□□ 0.96
SEC22A-203ENST00000466950 RIMBP3BA6NNM3 1639 aa21.06■□□□□ 0.96
SEC22A-203ENST00000466950 RIMBP3Q9UFD9 1639 aa21.06■□□□□ 0.96
SEC22A-203ENST00000466950 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
SEC22A-203ENST00000466950 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
SEC22A-203ENST00000466950 ABCA8O94911 1581 aa21.02■□□□□ 0.96
SEC22A-203ENST00000466950 FYCO1Q9BQS8 1478 aa21.02■□□□□ 0.96
SEC22A-203ENST00000466950 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
SEC22A-203ENST00000466950 CASKIN1Q8WXD9 1431 aa20.99■□□□□ 0.95
SEC22A-203ENST00000466950 LRRIQ1Q96JM4 1722 aa20.98■□□□□ 0.95
SEC22A-203ENST00000466950 PTPRGP23470 1445 aa20.98■□□□□ 0.95
SEC22A-203ENST00000466950 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
SEC22A-203ENST00000466950 CFAP43Q8NDM7 1665 aa20.96■□□□□ 0.95
SEC22A-203ENST00000466950 ABCC2Q92887 1545 aa20.94■□□□□ 0.94
SEC22A-203ENST00000466950 UHRF1BP1LA0JNW5 1464 aa20.94■□□□□ 0.94
SEC22A-203ENST00000466950 PLB1Q6P1J6 1458 aa20.93■□□□□ 0.94
SEC22A-203ENST00000466950 MAP3K1Q13233 1512 aa20.91■□□□□ 0.94
SEC22A-203ENST00000466950 UACAQ9BZF9 1416 aa20.91■□□□□ 0.94
SEC22A-203ENST00000466950 ADCY10Q96PN6 1610 aa20.9■□□□□ 0.94
SEC22A-203ENST00000466950 CCDC18Q5T9S5 1454 aa20.9■□□□□ 0.94
SEC22A-203ENST00000466950 NUP153P49790 1475 aaKnown RBP20.89■□□□□ 0.94
SEC22A-203ENST00000466950 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
SEC22A-203ENST00000466950 EPRSP07814 1512 aaKnown RBP20.85■□□□□ 0.93
SEC22A-203ENST00000466950 ZCCHC11Q5TAX3 1644 aaKnown RBP20.82■□□□□ 0.92
SEC22A-203ENST00000466950 KDM5BQ9UGL1 1544 aa20.82■□□□□ 0.92
SEC22A-203ENST00000466950 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
SEC22A-203ENST00000466950 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
SEC22A-203ENST00000466950 ATP10BO94823 1461 aa20.75■□□□□ 0.91
SEC22A-203ENST00000466950 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
SEC22A-203ENST00000466950 EHBP1L1Q8N3D4 1523 aa20.74■□□□□ 0.91
SEC22A-203ENST00000466950 LRRC9Q6ZRR7 1453 aa20.71■□□□□ 0.91
SEC22A-203ENST00000466950 APLP2Q06481 763 aa20.7■□□□□ 0.9
SEC22A-203ENST00000466950 MAGI3Q5TCQ9 1506 aa20.69■□□□□ 0.9
SEC22A-203ENST00000466950 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
SEC22A-203ENST00000466950 SUPT6HQ7KZ85 1726 aaKnown RBP20.68■□□□□ 0.9
SEC22A-203ENST00000466950 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
SEC22A-203ENST00000466950 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
SEC22A-203ENST00000466950 TROQ12816 1431 aaPredicted RBP20.65■□□□□ 0.9
SEC22A-203ENST00000466950 KIF14Q15058 1648 aa20.64■□□□□ 0.9
SEC22A-203ENST00000466950 CDK11AQ9UQ88 783 aaPredicted RBP20.63■□□□□ 0.89
SEC22A-203ENST00000466950 WDR7Q9Y4E6 1490 aa20.62■□□□□ 0.89
SEC22A-203ENST00000466950 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
SEC22A-203ENST00000466950 ASXL2Q76L83 1435 aa20.58■□□□□ 0.88
SEC22A-203ENST00000466950 ARID3CA6NKF2 412 aa20.57■□□□□ 0.88
SEC22A-203ENST00000466950 NPM1P06748 294 aaKnown RBP eCLIP20.57■□□□□ 0.88
SEC22A-203ENST00000466950 ITSN2Q9NZM3 1697 aa20.56■□□□□ 0.88
SEC22A-203ENST00000466950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.55■□□□□ 0.88
SEC22A-203ENST00000466950 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
SEC22A-203ENST00000466950 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
SEC22A-203ENST00000466950 ABCA9Q8IUA7 1624 aa20.54■□□□□ 0.88
SEC22A-203ENST00000466950 PLEKHD1A6NEE1 506 aa20.54■□□□□ 0.88
SEC22A-203ENST00000466950 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
SEC22A-203ENST00000466950 NCOA2Q15596 1464 aa20.53■□□□□ 0.88
SEC22A-203ENST00000466950 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
SEC22A-203ENST00000466950 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
SEC22A-203ENST00000466950 ABCC10Q5T3U5 1492 aa20.51■□□□□ 0.87
SEC22A-203ENST00000466950 GLI2P10070 1586 aa20.51■□□□□ 0.87
SEC22A-203ENST00000466950 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
SEC22A-203ENST00000466950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.5■□□□□ 0.87
SEC22A-203ENST00000466950 DIP2BQ9P265 1576 aa20.5■□□□□ 0.87
SEC22A-203ENST00000466950 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
SEC22A-203ENST00000466950 CDC42BPBQ9Y5S2 1711 aa20.46■□□□□ 0.87
SEC22A-203ENST00000466950 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
SEC22A-203ENST00000466950 MAP3K4Q9Y6R4 1608 aa20.45■□□□□ 0.87
SEC22A-203ENST00000466950 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
SEC22A-203ENST00000466950 PHLDB1Q86UU1 1377 aa20.41■□□□□ 0.86
SEC22A-203ENST00000466950 GPATCH8Q9UKJ3 1502 aaKnown RBP20.4■□□□□ 0.86
SEC22A-203ENST00000466950 CFAP74Q9C0B2 1584 aa20.39■□□□□ 0.85
SEC22A-203ENST00000466950 MIA2Q96PC5 1412 aa20.39■□□□□ 0.85
SEC22A-203ENST00000466950 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
SEC22A-203ENST00000466950 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
SEC22A-203ENST00000466950 PPARGC1BQ86YN6 1023 aaKnown RBP20.38■□□□□ 0.85
SEC22A-203ENST00000466950 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
SEC22A-203ENST00000466950 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms