RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 SHROOM2Q13796 1616 aa13.15□□□□□ -0.3
COPS7B-218ENST00000466901 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
COPS7B-218ENST00000466901 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
COPS7B-218ENST00000466901 CHIC1Q5VXU3 224 aa13.12□□□□□ -0.31
COPS7B-218ENST00000466901 PRG4Q92954 1404 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-218ENST00000466901 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
COPS7B-218ENST00000466901 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
COPS7B-218ENST00000466901 EEA1Q15075 1411 aa13.07□□□□□ -0.32
COPS7B-218ENST00000466901 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
COPS7B-218ENST00000466901 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
COPS7B-218ENST00000466901 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-218ENST00000466901 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
COPS7B-218ENST00000466901 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
COPS7B-218ENST00000466901 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
COPS7B-218ENST00000466901 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
COPS7B-218ENST00000466901 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
COPS7B-218ENST00000466901 PTPRGP23470 1445 aa12.96□□□□□ -0.33
COPS7B-218ENST00000466901 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
COPS7B-218ENST00000466901 DISP1Q96F81 1524 aa12.95□□□□□ -0.34
COPS7B-218ENST00000466901 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
COPS7B-218ENST00000466901 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
COPS7B-218ENST00000466901 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
COPS7B-218ENST00000466901 KIF21BO75037 1637 aa12.91□□□□□ -0.34
COPS7B-218ENST00000466901 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
COPS7B-218ENST00000466901 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
COPS7B-218ENST00000466901 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
COPS7B-218ENST00000466901 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
COPS7B-218ENST00000466901 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-218ENST00000466901 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
COPS7B-218ENST00000466901 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
COPS7B-218ENST00000466901 MAPKBP1O60336 1514 aa12.83□□□□□ -0.35
COPS7B-218ENST00000466901 ABCC2Q92887 1545 aa12.83□□□□□ -0.35
COPS7B-218ENST00000466901 SAMD9Q5K651 1589 aa12.82□□□□□ -0.36
COPS7B-218ENST00000466901 PLB1Q6P1J6 1458 aa12.8□□□□□ -0.36
COPS7B-218ENST00000466901 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
COPS7B-218ENST00000466901 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
COPS7B-218ENST00000466901 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
COPS7B-218ENST00000466901 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
COPS7B-218ENST00000466901 ABCA8O94911 1581 aa12.77□□□□□ -0.36
COPS7B-218ENST00000466901 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
COPS7B-218ENST00000466901 EFCAB5A4FU69 1503 aa12.77□□□□□ -0.37
COPS7B-218ENST00000466901 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
COPS7B-218ENST00000466901 ZCCHC11Q5TAX3 1644 aaKnown RBP12.76□□□□□ -0.37
COPS7B-218ENST00000466901 DIP2BQ9P265 1576 aa12.75□□□□□ -0.37
COPS7B-218ENST00000466901 RAPGEF6Q8TEU7 1601 aa12.72□□□□□ -0.37
COPS7B-218ENST00000466901 ARID3CA6NKF2 412 aa12.71□□□□□ -0.37
COPS7B-218ENST00000466901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-218ENST00000466901 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
COPS7B-218ENST00000466901 ATP10BO94823 1461 aa12.69□□□□□ -0.38
COPS7B-218ENST00000466901 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
COPS7B-218ENST00000466901 WDR7Q9Y4E6 1490 aa12.69□□□□□ -0.38
COPS7B-218ENST00000466901 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
COPS7B-218ENST00000466901 EPRSP07814 1512 aaKnown RBP12.68□□□□□ -0.38
COPS7B-218ENST00000466901 GLI2P10070 1586 aa12.68□□□□□ -0.38
COPS7B-218ENST00000466901 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
COPS7B-218ENST00000466901 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
COPS7B-218ENST00000466901 NUP153P49790 1475 aaKnown RBP12.66□□□□□ -0.38
COPS7B-218ENST00000466901 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
COPS7B-218ENST00000466901 CLIP1P30622 1438 aa12.62□□□□□ -0.39
COPS7B-218ENST00000466901 PLEKHD1A6NEE1 506 aa12.62□□□□□ -0.39
COPS7B-218ENST00000466901 MAP3K4Q9Y6R4 1608 aa12.62□□□□□ -0.39
COPS7B-218ENST00000466901 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
COPS7B-218ENST00000466901 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
COPS7B-218ENST00000466901 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
COPS7B-218ENST00000466901 CFAP43Q8NDM7 1665 aa12.6□□□□□ -0.39
COPS7B-218ENST00000466901 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
COPS7B-218ENST00000466901 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
COPS7B-218ENST00000466901 CDK11AQ9UQ88 783 aaPredicted RBP12.57□□□□□ -0.4
COPS7B-218ENST00000466901 KDM6BO15054 1643 aa12.57□□□□□ -0.4
COPS7B-218ENST00000466901 CDK13Q14004 1512 aaKnown RBP12.57□□□□□ -0.4
COPS7B-218ENST00000466901 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
COPS7B-218ENST00000466901 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
COPS7B-218ENST00000466901 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
COPS7B-218ENST00000466901 ABCA9Q8IUA7 1624 aa12.55□□□□□ -0.4
COPS7B-218ENST00000466901 PCF11O94913 1555 aaKnown RBP12.53□□□□□ -0.4
COPS7B-218ENST00000466901 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.41
COPS7B-218ENST00000466901 FYCO1Q9BQS8 1478 aa12.52□□□□□ -0.41
COPS7B-218ENST00000466901 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
COPS7B-218ENST00000466901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.41
COPS7B-218ENST00000466901 COL17A1Q9UMD9 1497 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-218ENST00000466901 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
COPS7B-218ENST00000466901 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
COPS7B-218ENST00000466901 TTC37Q6PGP7 1564 aa12.47□□□□□ -0.41
COPS7B-218ENST00000466901 NEO1Q92859 1461 aa12.46□□□□□ -0.41
COPS7B-218ENST00000466901 KIF14Q15058 1648 aa12.45□□□□□ -0.42
COPS7B-218ENST00000466901 ARAP3Q8WWN8 1544 aa12.45□□□□□ -0.42
COPS7B-218ENST00000466901 FANCAO15360 1455 aa12.43□□□□□ -0.42
COPS7B-218ENST00000466901 PLCH2O75038 1416 aa12.43□□□□□ -0.42
COPS7B-218ENST00000466901 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
COPS7B-218ENST00000466901 MYO5CQ9NQX4 1742 aa12.42□□□□□ -0.42
COPS7B-218ENST00000466901 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
COPS7B-218ENST00000466901 RAPGEF3O95398 923 aa12.41□□□□□ -0.42
COPS7B-218ENST00000466901 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
COPS7B-218ENST00000466901 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
COPS7B-218ENST00000466901 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
COPS7B-218ENST00000466901 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-218ENST00000466901 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
COPS7B-218ENST00000466901 ADGRL1O94910 1474 aa12.37□□□□□ -0.43
COPS7B-218ENST00000466901 CDC42BPBQ9Y5S2 1711 aa12.36□□□□□ -0.43
COPS7B-218ENST00000466901 SCAPERQ9BY12 1400 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms