RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
UBA3-209ENST00000466763 ARHGEF11O15085 1522 aa23■■□□□ 1.27
UBA3-209ENST00000466763 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
UBA3-209ENST00000466763 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
UBA3-209ENST00000466763 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
UBA3-209ENST00000466763 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
UBA3-209ENST00000466763 POTEDQ86YR6 584 aa22.96■■□□□ 1.27
UBA3-209ENST00000466763 JPH4Q96JJ6 628 aa22.95■■□□□ 1.26
UBA3-209ENST00000466763 KIAA0586Q9BVV6 1533 aa22.94■■□□□ 1.26
UBA3-209ENST00000466763 EHMT2Q96KQ7 1210 aa22.93■■□□□ 1.26
UBA3-209ENST00000466763 MSH5O43196 834 aa22.9■■□□□ 1.26
UBA3-209ENST00000466763 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
UBA3-209ENST00000466763 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
UBA3-209ENST00000466763 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
UBA3-209ENST00000466763 IQGAP2Q13576 1575 aa22.84■■□□□ 1.25
UBA3-209ENST00000466763 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
UBA3-209ENST00000466763 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
UBA3-209ENST00000466763 CTTNBP2Q8WZ74 1663 aa22.81■■□□□ 1.24
UBA3-209ENST00000466763 KIF21BO75037 1637 aa22.79■■□□□ 1.24
UBA3-209ENST00000466763 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
UBA3-209ENST00000466763 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
UBA3-209ENST00000466763 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
UBA3-209ENST00000466763 CARMIL2Q6F5E8 1435 aa22.74■■□□□ 1.23
UBA3-209ENST00000466763 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
UBA3-209ENST00000466763 UGGT2Q9NYU1 1516 aa22.69■■□□□ 1.22
UBA3-209ENST00000466763 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
UBA3-209ENST00000466763 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
UBA3-209ENST00000466763 TNIKQ9UKE5 1360 aa22.64■■□□□ 1.22
UBA3-209ENST00000466763 PTPRGP23470 1445 aa22.64■■□□□ 1.21
UBA3-209ENST00000466763 PIAS4Q8N2W9 510 aaPredicted RBP22.63■■□□□ 1.21
UBA3-209ENST00000466763 KIAA0556O60303 1618 aa22.61■■□□□ 1.21
UBA3-209ENST00000466763 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
UBA3-209ENST00000466763 NPM1P06748 294 aaKnown RBP eCLIP22.51■■□□□ 1.19
UBA3-209ENST00000466763 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
UBA3-209ENST00000466763 SAMD9Q5K651 1589 aa22.49■■□□□ 1.19
UBA3-209ENST00000466763 UACAQ9BZF9 1416 aa22.47■■□□□ 1.19
UBA3-209ENST00000466763 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
UBA3-209ENST00000466763 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
UBA3-209ENST00000466763 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
UBA3-209ENST00000466763 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
UBA3-209ENST00000466763 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
UBA3-209ENST00000466763 ABCC2Q92887 1545 aa22.38■■□□□ 1.17
UBA3-209ENST00000466763 ARHGAP35Q9NRY4 1499 aa22.38■■□□□ 1.17
UBA3-209ENST00000466763 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
UBA3-209ENST00000466763 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
UBA3-209ENST00000466763 CLIP1P30622 1438 aa22.35■■□□□ 1.17
UBA3-209ENST00000466763 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
UBA3-209ENST00000466763 ABCA8O94911 1581 aa22.34■■□□□ 1.17
UBA3-209ENST00000466763 ATP1B4Q9UN42 357 aaPredicted RBP22.32■■□□□ 1.16
UBA3-209ENST00000466763 RAPGEF6Q8TEU7 1601 aa22.29■■□□□ 1.16
UBA3-209ENST00000466763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
UBA3-209ENST00000466763 ADRA2BP18089 450 aa22.29■■□□□ 1.16
UBA3-209ENST00000466763 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
UBA3-209ENST00000466763 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
UBA3-209ENST00000466763 KDM5BQ9UGL1 1544 aa22.27■■□□□ 1.16
UBA3-209ENST00000466763 FMN1Q68DA7 1419 aa22.27■■□□□ 1.16
UBA3-209ENST00000466763 ZCCHC11Q5TAX3 1644 aaKnown RBP22.27■■□□□ 1.16
UBA3-209ENST00000466763 MAPKBP1O60336 1514 aa22.25■■□□□ 1.15
UBA3-209ENST00000466763 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
UBA3-209ENST00000466763 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
UBA3-209ENST00000466763 ATP10BO94823 1461 aa22.2■■□□□ 1.14
UBA3-209ENST00000466763 NUP153P49790 1475 aaKnown RBP22.19■■□□□ 1.14
UBA3-209ENST00000466763 KCNH8Q96L42 1107 aa22.17■■□□□ 1.14
UBA3-209ENST00000466763 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
UBA3-209ENST00000466763 HECW1Q76N89 1606 aa22.14■■□□□ 1.14
UBA3-209ENST00000466763 KIF13AQ9H1H9 1805 aa22.13■■□□□ 1.13
UBA3-209ENST00000466763 WDR7Q9Y4E6 1490 aa22.12■■□□□ 1.13
UBA3-209ENST00000466763 DIP2BQ9P265 1576 aa22.12■■□□□ 1.13
UBA3-209ENST00000466763 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
UBA3-209ENST00000466763 PCF11O94913 1555 aaKnown RBP22.11■■□□□ 1.13
UBA3-209ENST00000466763 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
UBA3-209ENST00000466763 CASKIN1Q8WXD9 1431 aa22.1■■□□□ 1.13
UBA3-209ENST00000466763 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
UBA3-209ENST00000466763 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
UBA3-209ENST00000466763 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
UBA3-209ENST00000466763 FYCO1Q9BQS8 1478 aa22.04■■□□□ 1.12
UBA3-209ENST00000466763 LRRIQ1Q96JM4 1722 aa22.01■■□□□ 1.11
UBA3-209ENST00000466763 GLI2P10070 1586 aa22.01■■□□□ 1.11
UBA3-209ENST00000466763 CCDC18Q5T9S5 1454 aa22■■□□□ 1.11
UBA3-209ENST00000466763 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
UBA3-209ENST00000466763 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
UBA3-209ENST00000466763 MAP3K4Q9Y6R4 1608 aa21.92■■□□□ 1.1
UBA3-209ENST00000466763 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
UBA3-209ENST00000466763 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
UBA3-209ENST00000466763 ABCA9Q8IUA7 1624 aa21.88■■□□□ 1.09
UBA3-209ENST00000466763 APLP2Q06481 763 aa21.87■■□□□ 1.09
UBA3-209ENST00000466763 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
UBA3-209ENST00000466763 PPRC1Q5VV67 1664 aaKnown RBP21.86■■□□□ 1.09
UBA3-209ENST00000466763 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
UBA3-209ENST00000466763 MAGI3Q5TCQ9 1506 aa21.85■■□□□ 1.09
UBA3-209ENST00000466763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
UBA3-209ENST00000466763 KIF14Q15058 1648 aa21.84■■□□□ 1.09
UBA3-209ENST00000466763 TTC37Q6PGP7 1564 aa21.82■■□□□ 1.08
UBA3-209ENST00000466763 TIAM1Q13009 1591 aa21.79■■□□□ 1.08
UBA3-209ENST00000466763 KDM6BO15054 1643 aa21.77■■□□□ 1.07
UBA3-209ENST00000466763 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
UBA3-209ENST00000466763 MYO5CQ9NQX4 1742 aa21.74■■□□□ 1.07
UBA3-209ENST00000466763 PLCH2O75038 1416 aa21.73■■□□□ 1.07
UBA3-209ENST00000466763 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
UBA3-209ENST00000466763 EFCAB2Q5VUJ9 269 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms