RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 JPH4Q96JJ6 628 aa28.62■■■□□ 2.17
SDHB-203ENST00000466613 TRHP20396 242 aaPredicted RBP28.61■■■□□ 2.17
SDHB-203ENST00000466613 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
SDHB-203ENST00000466613 KIAA0586Q9BVV6 1533 aa28.59■■■□□ 2.17
SDHB-203ENST00000466613 RAPGEF2Q9Y4G8 1499 aa28.41■■■□□ 2.14
SDHB-203ENST00000466613 IQGAP2Q13576 1575 aa28.41■■■□□ 2.14
SDHB-203ENST00000466613 ADCY10Q96PN6 1610 aa28.31■■■□□ 2.12
SDHB-203ENST00000466613 CARMIL2Q6F5E8 1435 aa28.29■■■□□ 2.12
SDHB-203ENST00000466613 CTTNBP2Q8WZ74 1663 aa28.26■■■□□ 2.11
SDHB-203ENST00000466613 KIF13AQ9H1H9 1805 aa28.24■■■□□ 2.11
SDHB-203ENST00000466613 PTPRGP23470 1445 aa28.23■■■□□ 2.11
SDHB-203ENST00000466613 TNIKQ9UKE5 1360 aa28.23■■■□□ 2.11
SDHB-203ENST00000466613 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
SDHB-203ENST00000466613 DISP1Q96F81 1524 aa28.22■■■□□ 2.11
SDHB-203ENST00000466613 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
SDHB-203ENST00000466613 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
SDHB-203ENST00000466613 NPM1P06748 294 aaKnown RBP eCLIP28.2■■■□□ 2.1
SDHB-203ENST00000466613 KIAA0556O60303 1618 aa28.15■■■□□ 2.1
SDHB-203ENST00000466613 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
SDHB-203ENST00000466613 ABCC10Q5T3U5 1492 aa28.11■■■□□ 2.09
SDHB-203ENST00000466613 DIP2BQ9P265 1576 aa28.09■■■□□ 2.09
SDHB-203ENST00000466613 UHRF1BP1LA0JNW5 1464 aa28.07■■■□□ 2.08
SDHB-203ENST00000466613 ABCC2Q92887 1545 aa28.07■■■□□ 2.08
SDHB-203ENST00000466613 EEA1Q15075 1411 aa28.05■■■□□ 2.08
SDHB-203ENST00000466613 UACAQ9BZF9 1416 aa28.05■■■□□ 2.08
SDHB-203ENST00000466613 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
SDHB-203ENST00000466613 GOLGA3Q08378 1498 aa28.02■■■□□ 2.08
SDHB-203ENST00000466613 FAM69CQ0P6D2 419 aa28.02■■■□□ 2.08
SDHB-203ENST00000466613 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
SDHB-203ENST00000466613 ZCCHC11Q5TAX3 1644 aaKnown RBP27.92■■■□□ 2.06
SDHB-203ENST00000466613 PLB1Q6P1J6 1458 aa27.91■■■□□ 2.06
SDHB-203ENST00000466613 ASXL2Q76L83 1435 aa27.91■■■□□ 2.06
SDHB-203ENST00000466613 TSPOAP1O95153 1857 aa27.89■■■□□ 2.05
SDHB-203ENST00000466613 ABCA8O94911 1581 aa27.86■■■□□ 2.05
SDHB-203ENST00000466613 GLI2P10070 1586 aa27.85■■■□□ 2.05
SDHB-203ENST00000466613 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
SDHB-203ENST00000466613 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
SDHB-203ENST00000466613 SAMD9Q5K651 1589 aa27.84■■■□□ 2.05
SDHB-203ENST00000466613 KIF21BO75037 1637 aa27.84■■■□□ 2.05
SDHB-203ENST00000466613 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
SDHB-203ENST00000466613 PPRC1Q5VV67 1664 aaKnown RBP27.75■■■□□ 2.03
SDHB-203ENST00000466613 KDM6BO15054 1643 aa27.74■■■□□ 2.03
SDHB-203ENST00000466613 P3H3Q8IVL6 736 aa27.73■■■□□ 2.03
SDHB-203ENST00000466613 WDR7Q9Y4E6 1490 aa27.72■■■□□ 2.03
SDHB-203ENST00000466613 MAP3K4Q9Y6R4 1608 aa27.72■■■□□ 2.03
SDHB-203ENST00000466613 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
SDHB-203ENST00000466613 EFCAB5A4FU69 1503 aa27.62■■■□□ 2.01
SDHB-203ENST00000466613 RANGAP1P46060 587 aaPredicted RBP27.61■■■□□ 2.01
SDHB-203ENST00000466613 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
SDHB-203ENST00000466613 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
SDHB-203ENST00000466613 ATP10BO94823 1461 aa27.58■■■□□ 2.01
SDHB-203ENST00000466613 TEX14Q8IWB6 1497 aa27.58■■■□□ 2.01
SDHB-203ENST00000466613 ARID3CA6NKF2 412 aa27.53■■■□□ 2
SDHB-203ENST00000466613 KCNH8Q96L42 1107 aa27.52■■■□□ 2
SDHB-203ENST00000466613 NUP153P49790 1475 aaKnown RBP27.51■■■□□ 2
SDHB-203ENST00000466613 UBTFP17480 764 aaKnown RBP27.51■■□□□ 1.99
SDHB-203ENST00000466613 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
SDHB-203ENST00000466613 CD109Q6YHK3 1445 aa27.49■■□□□ 1.99
SDHB-203ENST00000466613 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
SDHB-203ENST00000466613 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
SDHB-203ENST00000466613 COL17A1Q9UMD9 1497 aaPredicted RBP27.45■■□□□ 1.99
SDHB-203ENST00000466613 ABCA9Q8IUA7 1624 aa27.43■■□□□ 1.98
SDHB-203ENST00000466613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.41■■□□□ 1.98
SDHB-203ENST00000466613 HNRNPUL2Q1KMD3 747 aaKnown RBP27.41■■□□□ 1.98
SDHB-203ENST00000466613 ARHGAP35Q9NRY4 1499 aa27.39■■□□□ 1.98
SDHB-203ENST00000466613 FMN1Q68DA7 1419 aa27.33■■□□□ 1.97
SDHB-203ENST00000466613 HECW1Q76N89 1606 aa27.3■■□□□ 1.96
SDHB-203ENST00000466613 PLEKHD1A6NEE1 506 aa27.28■■□□□ 1.96
SDHB-203ENST00000466613 CDK13Q14004 1512 aaKnown RBP27.27■■□□□ 1.96
SDHB-203ENST00000466613 ARAP3Q8WWN8 1544 aa27.26■■□□□ 1.95
SDHB-203ENST00000466613 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
SDHB-203ENST00000466613 NEO1Q92859 1461 aa27.22■■□□□ 1.95
SDHB-203ENST00000466613 KDM4FA0A1W2PPD8 638 aa27.22■■□□□ 1.95
SDHB-203ENST00000466613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.21■■□□□ 1.95
SDHB-203ENST00000466613 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
SDHB-203ENST00000466613 LRRIQ1Q96JM4 1722 aa27.17■■□□□ 1.94
SDHB-203ENST00000466613 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
SDHB-203ENST00000466613 ADGRL1O94910 1474 aa27.14■■□□□ 1.94
SDHB-203ENST00000466613 CFAP74Q9C0B2 1584 aa27.14■■□□□ 1.93
SDHB-203ENST00000466613 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
SDHB-203ENST00000466613 FRMPD1Q5SYB0 1578 aa27.09■■□□□ 1.93
SDHB-203ENST00000466613 FANCAO15360 1455 aa27.08■■□□□ 1.93
SDHB-203ENST00000466613 CDK11AQ9UQ88 783 aaPredicted RBP27.08■■□□□ 1.93
SDHB-203ENST00000466613 CLIP1P30622 1438 aa27.07■■□□□ 1.92
SDHB-203ENST00000466613 CASKIN1Q8WXD9 1431 aa27.07■■□□□ 1.92
SDHB-203ENST00000466613 KIF14Q15058 1648 aa27.05■■□□□ 1.92
SDHB-203ENST00000466613 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
SDHB-203ENST00000466613 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
SDHB-203ENST00000466613 RAPGEF3O95398 923 aa27.04■■□□□ 1.92
SDHB-203ENST00000466613 TROQ12816 1431 aaPredicted RBP27.04■■□□□ 1.92
SDHB-203ENST00000466613 CCDC18Q5T9S5 1454 aa27.04■■□□□ 1.92
SDHB-203ENST00000466613 RICTORQ6R327 1708 aa27.04■■□□□ 1.92
SDHB-203ENST00000466613 PLCH2O75038 1416 aa27.01■■□□□ 1.91
SDHB-203ENST00000466613 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
SDHB-203ENST00000466613 FYCO1Q9BQS8 1478 aa27■■□□□ 1.91
SDHB-203ENST00000466613 ARHGEF40Q8TER5 1519 aa26.93■■□□□ 1.9
SDHB-203ENST00000466613 ZMYM4Q5VZL5 1548 aa26.92■■□□□ 1.9
SDHB-203ENST00000466613 CDC42BPBQ9Y5S2 1711 aa26.88■■□□□ 1.89
SDHB-203ENST00000466613 EFCAB2Q5VUJ9 269 aa26.88■■□□□ 1.89
SDHB-203ENST00000466613 ARHGAP5Q13017 1502 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms