RNA–Protein interactions for RNA: ENST00000466490.6

SRPRB-201, Transcript of SRP receptor subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRPRB, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-201ENST00000466490 SETD5Q9C0A6 1442 aa18.97■□□□□ 0.63
SRPRB-201ENST00000466490 ANP32CO43423 234 aa18.96■□□□□ 0.63
SRPRB-201ENST00000466490 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
SRPRB-201ENST00000466490 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
SRPRB-201ENST00000466490 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
SRPRB-201ENST00000466490 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
SRPRB-201ENST00000466490 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
SRPRB-201ENST00000466490 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
SRPRB-201ENST00000466490 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
SRPRB-201ENST00000466490 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
SRPRB-201ENST00000466490 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
SRPRB-201ENST00000466490 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
SRPRB-201ENST00000466490 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
SRPRB-201ENST00000466490 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
SRPRB-201ENST00000466490 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
SRPRB-201ENST00000466490 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
SRPRB-201ENST00000466490 CUX1P39880 1505 aa18.75■□□□□ 0.59
SRPRB-201ENST00000466490 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
SRPRB-201ENST00000466490 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
SRPRB-201ENST00000466490 PPP4R2Q9NY27 417 aa18.69■□□□□ 0.58
SRPRB-201ENST00000466490 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
SRPRB-201ENST00000466490 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
SRPRB-201ENST00000466490 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
SRPRB-201ENST00000466490 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
SRPRB-201ENST00000466490 DEKP35659 375 aaKnown RBP18.67■□□□□ 0.58
SRPRB-201ENST00000466490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.66■□□□□ 0.58
SRPRB-201ENST00000466490 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
SRPRB-201ENST00000466490 IGF1RP08069 1367 aa18.57■□□□□ 0.56
SRPRB-201ENST00000466490 PCF11O94913 1555 aaKnown RBP18.56■□□□□ 0.56
SRPRB-201ENST00000466490 UACAQ9BZF9 1416 aa18.55■□□□□ 0.56
SRPRB-201ENST00000466490 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
SRPRB-201ENST00000466490 CCDC18Q5T9S5 1454 aa18.54■□□□□ 0.56
SRPRB-201ENST00000466490 PRKCSHP14314 528 aaPredicted RBP18.53■□□□□ 0.56
SRPRB-201ENST00000466490 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
SRPRB-201ENST00000466490 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
SRPRB-201ENST00000466490 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
SRPRB-201ENST00000466490 CFTRP13569 1480 aa18.5■□□□□ 0.55
SRPRB-201ENST00000466490 HFM1A2PYH4 1435 aa18.49■□□□□ 0.55
SRPRB-201ENST00000466490 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
SRPRB-201ENST00000466490 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
SRPRB-201ENST00000466490 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
SRPRB-201ENST00000466490 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
SRPRB-201ENST00000466490 PTPN23Q9H3S7 1636 aa18.47■□□□□ 0.55
SRPRB-201ENST00000466490 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
SRPRB-201ENST00000466490 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
SRPRB-201ENST00000466490 CNTLNQ9NXG0 1405 aa18.46■□□□□ 0.55
SRPRB-201ENST00000466490 AQRO60306 1485 aaKnown RBP eCLIP18.45■□□□□ 0.543e-7■■■■■ 30.5
SRPRB-201ENST00000466490 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
SRPRB-201ENST00000466490 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
SRPRB-201ENST00000466490 CASKIN1Q8WXD9 1431 aa18.43■□□□□ 0.54
SRPRB-201ENST00000466490 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
SRPRB-201ENST00000466490 NBR1Q14596 966 aa18.43■□□□□ 0.54
SRPRB-201ENST00000466490 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
SRPRB-201ENST00000466490 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
SRPRB-201ENST00000466490 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
SRPRB-201ENST00000466490 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
SRPRB-201ENST00000466490 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
SRPRB-201ENST00000466490 NAIPQ13075 1403 aa18.39■□□□□ 0.54
SRPRB-201ENST00000466490 PTPRKQ15262 1439 aa18.39■□□□□ 0.54
SRPRB-201ENST00000466490 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
SRPRB-201ENST00000466490 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.53
SRPRB-201ENST00000466490 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
SRPRB-201ENST00000466490 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
SRPRB-201ENST00000466490 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
SRPRB-201ENST00000466490 FAM9BQ8IZU0 186 aa18.37■□□□□ 0.53
SRPRB-201ENST00000466490 IPO9Q96P70 1041 aaKnown RBP18.37■□□□□ 0.53
SRPRB-201ENST00000466490 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
SRPRB-201ENST00000466490 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
SRPRB-201ENST00000466490 MRS2Q9HD23 443 aa18.36■□□□□ 0.53
SRPRB-201ENST00000466490 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
SRPRB-201ENST00000466490 NCOA1Q15788 1441 aa18.33■□□□□ 0.53
SRPRB-201ENST00000466490 CCDC7Q96M83 1385 aa18.32■□□□□ 0.52
SRPRB-201ENST00000466490 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
SRPRB-201ENST00000466490 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
SRPRB-201ENST00000466490 HECW1Q76N89 1606 aa18.29■□□□□ 0.52
SRPRB-201ENST00000466490 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
SRPRB-201ENST00000466490 RNF123Q5XPI4 1314 aa18.28■□□□□ 0.52
SRPRB-201ENST00000466490 MYOM3Q5VTT5 1437 aa18.28■□□□□ 0.52
SRPRB-201ENST00000466490 ANO8Q9HCE9 1232 aaPredicted RBP18.27■□□□□ 0.52
SRPRB-201ENST00000466490 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.51
SRPRB-201ENST00000466490 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
SRPRB-201ENST00000466490 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
SRPRB-201ENST00000466490 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
SRPRB-201ENST00000466490 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
SRPRB-201ENST00000466490 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
SRPRB-201ENST00000466490 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
SRPRB-201ENST00000466490 AKNAQ7Z591 1439 aa18.24■□□□□ 0.51
SRPRB-201ENST00000466490 CTTNBP2Q8WZ74 1663 aa18.24■□□□□ 0.51
SRPRB-201ENST00000466490 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
SRPRB-201ENST00000466490 SUPT6HQ7KZ85 1726 aaKnown RBP18.22■□□□□ 0.51
SRPRB-201ENST00000466490 L3MBTL2Q969R5 705 aa18.19■□□□□ 0.5
SRPRB-201ENST00000466490 LRRIQ1Q96JM4 1722 aa18.19■□□□□ 0.5
SRPRB-201ENST00000466490 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
SRPRB-201ENST00000466490 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
SRPRB-201ENST00000466490 KIF7Q2M1P5 1343 aa18.17■□□□□ 0.5
SRPRB-201ENST00000466490 CUL7Q14999 1698 aa18.17■□□□□ 0.5
SRPRB-201ENST00000466490 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
SRPRB-201ENST00000466490 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
SRPRB-201ENST00000466490 SPATA31E1Q6ZUB1 1445 aa18.16■□□□□ 0.5
SRPRB-201ENST00000466490 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms