RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
APP-214ENST00000466453 NUP160Q12769 1436 aa15.42■□□□□ 0.06
APP-214ENST00000466453 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
APP-214ENST00000466453 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
APP-214ENST00000466453 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
APP-214ENST00000466453 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
APP-214ENST00000466453 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
APP-214ENST00000466453 PPRC1Q5VV67 1664 aaKnown RBP15.34■□□□□ 0.05
APP-214ENST00000466453 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
APP-214ENST00000466453 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
APP-214ENST00000466453 COL17A1Q9UMD9 1497 aaPredicted RBP15.28■□□□□ 0.04
APP-214ENST00000466453 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
APP-214ENST00000466453 CUX1P39880 1505 aa15.22■□□□□ 0.03
APP-214ENST00000466453 GLI2P10070 1586 aa15.21■□□□□ 0.03
APP-214ENST00000466453 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
APP-214ENST00000466453 CERKQ8TCT0 537 aa15.19■□□□□ 0.02
APP-214ENST00000466453 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
APP-214ENST00000466453 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
APP-214ENST00000466453 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
APP-214ENST00000466453 PTPRMP28827 1452 aa15.1■□□□□ 0.01
APP-214ENST00000466453 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
APP-214ENST00000466453 PLB1Q6P1J6 1458 aa15.09■□□□□ 0.01
APP-214ENST00000466453 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
APP-214ENST00000466453 MAP3K4Q9Y6R4 1608 aa15.09■□□□□ 0.01
APP-214ENST00000466453 KIF21BO75037 1637 aa15.07■□□□□ 0
APP-214ENST00000466453 ASXL2Q76L83 1435 aa15.07■□□□□ 0
APP-214ENST00000466453 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
APP-214ENST00000466453 ABCC2Q92887 1545 aa15.03■□□□□ -0
APP-214ENST00000466453 EPRSP07814 1512 aaKnown RBP14.99□□□□□ -0.01
APP-214ENST00000466453 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
APP-214ENST00000466453 KIAA0586Q9BVV6 1533 aa14.99□□□□□ -0.01
APP-214ENST00000466453 CUL7Q14999 1698 aa14.96□□□□□ -0.01
APP-214ENST00000466453 HSPA2P54652 639 aa14.92□□□□□ -0.02
APP-214ENST00000466453 PTPRGP23470 1445 aa14.91□□□□□ -0.02
APP-214ENST00000466453 MADDQ8WXG6 1647 aa14.9□□□□□ -0.02
APP-214ENST00000466453 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
APP-214ENST00000466453 BCORL1Q5H9F3 1711 aa14.87□□□□□ -0.03
APP-214ENST00000466453 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
APP-214ENST00000466453 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
APP-214ENST00000466453 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
APP-214ENST00000466453 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
APP-214ENST00000466453 TNIKQ9UKE5 1360 aa14.79□□□□□ -0.04
APP-214ENST00000466453 CFAP43Q8NDM7 1665 aa14.78□□□□□ -0.04
APP-214ENST00000466453 ZCCHC11Q5TAX3 1644 aaKnown RBP14.77□□□□□ -0.04
APP-214ENST00000466453 UACAQ9BZF9 1416 aa14.77□□□□□ -0.04
APP-214ENST00000466453 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
APP-214ENST00000466453 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
APP-214ENST00000466453 CD109Q6YHK3 1445 aa14.75□□□□□ -0.05
APP-214ENST00000466453 WDR7Q9Y4E6 1490 aa14.75□□□□□ -0.05
APP-214ENST00000466453 TTBK1Q5TCY1 1321 aaPredicted RBP14.74□□□□□ -0.05
APP-214ENST00000466453 STRCQ7RTU9 1775 aa14.71□□□□□ -0.05
APP-214ENST00000466453 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
APP-214ENST00000466453 YEATS2Q9ULM3 1422 aa14.71□□□□□ -0.05
APP-214ENST00000466453 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
APP-214ENST00000466453 MED1Q15648 1581 aaPredicted RBP14.7□□□□□ -0.06
APP-214ENST00000466453 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
APP-214ENST00000466453 LTBP4Q8N2S1 1624 aa14.67□□□□□ -0.06
APP-214ENST00000466453 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
APP-214ENST00000466453 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
APP-214ENST00000466453 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
APP-214ENST00000466453 PTPRTO14522 1441 aa14.6□□□□□ -0.07
APP-214ENST00000466453 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
APP-214ENST00000466453 ARHGEF40Q8TER5 1519 aa14.59□□□□□ -0.07
APP-214ENST00000466453 TTC37Q6PGP7 1564 aa14.59□□□□□ -0.07
APP-214ENST00000466453 PHLDB1Q86UU1 1377 aa14.59□□□□□ -0.07
APP-214ENST00000466453 FRMPD1Q5SYB0 1578 aa14.58□□□□□ -0.08
APP-214ENST00000466453 DISP1Q96F81 1524 aa14.57□□□□□ -0.08
APP-214ENST00000466453 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
APP-214ENST00000466453 IQGAP2Q13576 1575 aa14.55□□□□□ -0.08
APP-214ENST00000466453 FER1L4A9Z1Z3 1794 aa14.55□□□□□ -0.08
APP-214ENST00000466453 POGZQ7Z3K3 1410 aa14.54□□□□□ -0.08
APP-214ENST00000466453 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
APP-214ENST00000466453 UBAP1LF5GYI3 381 aa14.52□□□□□ -0.09
APP-214ENST00000466453 FANCAO15360 1455 aa14.51□□□□□ -0.09
APP-214ENST00000466453 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
APP-214ENST00000466453 SETD1BQ9UPS6 1966 aaKnown RBP14.5□□□□□ -0.09
APP-214ENST00000466453 NEO1Q92859 1461 aa14.49□□□□□ -0.09
APP-214ENST00000466453 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
APP-214ENST00000466453 UHRF1BP1Q6BDS2 1440 aa14.47□□□□□ -0.09
APP-214ENST00000466453 IGF1RP08069 1367 aa14.47□□□□□ -0.09
APP-214ENST00000466453 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
APP-214ENST00000466453 HSPA1LP34931 641 aa14.44□□□□□ -0.1
APP-214ENST00000466453 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
APP-214ENST00000466453 AKNAQ7Z591 1439 aa14.42□□□□□ -0.1
APP-214ENST00000466453 UGGT2Q9NYU1 1516 aa14.42□□□□□ -0.1
APP-214ENST00000466453 RICTORQ6R327 1708 aa14.42□□□□□ -0.1
APP-214ENST00000466453 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
APP-214ENST00000466453 ABCA8O94911 1581 aa14.39□□□□□ -0.11
APP-214ENST00000466453 NCOA1Q15788 1441 aa14.38□□□□□ -0.11
APP-214ENST00000466453 ZMYM4Q5VZL5 1548 aa14.37□□□□□ -0.11
APP-214ENST00000466453 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
APP-214ENST00000466453 MLECQ14165 292 aa14.36□□□□□ -0.11
APP-214ENST00000466453 EFCAB5A4FU69 1503 aa14.36□□□□□ -0.11
APP-214ENST00000466453 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
APP-214ENST00000466453 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
APP-214ENST00000466453 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
APP-214ENST00000466453 ZNF335Q9H4Z2 1342 aaPredicted RBP14.34□□□□□ -0.11
APP-214ENST00000466453 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
APP-214ENST00000466453 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
APP-214ENST00000466453 RGS17Q9UGC6 210 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms