RNA–Protein interactions for RNA: ENST00000466382.2

ARID1A-206, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 2

Gene ARID1A, Length 2,699 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-206ENST00000466382 CUL7Q14999 1698 aa18.82■□□□□ 0.6
ARID1A-206ENST00000466382 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
ARID1A-206ENST00000466382 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
ARID1A-206ENST00000466382 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
ARID1A-206ENST00000466382 WDR62O43379 1518 aa18.73■□□□□ 0.59
ARID1A-206ENST00000466382 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
ARID1A-206ENST00000466382 THOC2Q8NI27 1593 aaKnown RBP18.69■□□□□ 0.58
ARID1A-206ENST00000466382 MYT1Q01538 1121 aa18.68■□□□□ 0.58
ARID1A-206ENST00000466382 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
ARID1A-206ENST00000466382 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
ARID1A-206ENST00000466382 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
ARID1A-206ENST00000466382 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
ARID1A-206ENST00000466382 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.57
ARID1A-206ENST00000466382 TIAM1Q13009 1591 aa18.64■□□□□ 0.57
ARID1A-206ENST00000466382 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
ARID1A-206ENST00000466382 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
ARID1A-206ENST00000466382 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
ARID1A-206ENST00000466382 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
ARID1A-206ENST00000466382 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
ARID1A-206ENST00000466382 ADAMTS12P58397 1594 aa18.6■□□□□ 0.57
ARID1A-206ENST00000466382 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
ARID1A-206ENST00000466382 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
ARID1A-206ENST00000466382 SAMD9Q5K651 1589 aa18.57■□□□□ 0.56
ARID1A-206ENST00000466382 FMN1Q68DA7 1419 aa18.56■□□□□ 0.56
ARID1A-206ENST00000466382 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
ARID1A-206ENST00000466382 FYCO1Q9BQS8 1478 aa18.55■□□□□ 0.56
ARID1A-206ENST00000466382 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
ARID1A-206ENST00000466382 ITGAEP38570 1179 aa18.54■□□□□ 0.56
ARID1A-206ENST00000466382 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.56
ARID1A-206ENST00000466382 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
ARID1A-206ENST00000466382 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
ARID1A-206ENST00000466382 FBLN2P98095 1184 aa18.46■□□□□ 0.54
ARID1A-206ENST00000466382 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
ARID1A-206ENST00000466382 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
ARID1A-206ENST00000466382 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
ARID1A-206ENST00000466382 KIAA0586Q9BVV6 1533 aa18.43■□□□□ 0.54
ARID1A-206ENST00000466382 LRRIQ1Q96JM4 1722 aa18.41■□□□□ 0.54
ARID1A-206ENST00000466382 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
ARID1A-206ENST00000466382 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
ARID1A-206ENST00000466382 UGGT2Q9NYU1 1516 aa18.4■□□□□ 0.54
ARID1A-206ENST00000466382 DHX57Q6P158 1386 aaKnown RBP18.39■□□□□ 0.54
ARID1A-206ENST00000466382 ARID3CA6NKF2 412 aa18.39■□□□□ 0.54
ARID1A-206ENST00000466382 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
ARID1A-206ENST00000466382 DISP1Q96F81 1524 aa18.38■□□□□ 0.53
ARID1A-206ENST00000466382 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
ARID1A-206ENST00000466382 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
ARID1A-206ENST00000466382 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
ARID1A-206ENST00000466382 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
ARID1A-206ENST00000466382 EPRSP07814 1512 aaKnown RBP18.31■□□□□ 0.52
ARID1A-206ENST00000466382 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
ARID1A-206ENST00000466382 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
ARID1A-206ENST00000466382 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
ARID1A-206ENST00000466382 KIAA0556O60303 1618 aa18.29■□□□□ 0.52
ARID1A-206ENST00000466382 NUP160Q12769 1436 aa18.29■□□□□ 0.52
ARID1A-206ENST00000466382 SETD5Q9C0A6 1442 aa18.27■□□□□ 0.52
ARID1A-206ENST00000466382 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
ARID1A-206ENST00000466382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
ARID1A-206ENST00000466382 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
ARID1A-206ENST00000466382 CLSPNQ9HAW4 1339 aa18.25■□□□□ 0.51
ARID1A-206ENST00000466382 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
ARID1A-206ENST00000466382 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
ARID1A-206ENST00000466382 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
ARID1A-206ENST00000466382 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
ARID1A-206ENST00000466382 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
ARID1A-206ENST00000466382 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
ARID1A-206ENST00000466382 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
ARID1A-206ENST00000466382 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
ARID1A-206ENST00000466382 CARMIL2Q6F5E8 1435 aa18.15■□□□□ 0.5
ARID1A-206ENST00000466382 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
ARID1A-206ENST00000466382 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
ARID1A-206ENST00000466382 MAPKBP1O60336 1514 aa18.14■□□□□ 0.5
ARID1A-206ENST00000466382 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
ARID1A-206ENST00000466382 PTPN23Q9H3S7 1636 aa18.12■□□□□ 0.49
ARID1A-206ENST00000466382 CHIC2Q9UKJ5 165 aa18.11■□□□□ 0.49
ARID1A-206ENST00000466382 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
ARID1A-206ENST00000466382 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
ARID1A-206ENST00000466382 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
ARID1A-206ENST00000466382 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
ARID1A-206ENST00000466382 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
ARID1A-206ENST00000466382 HFM1A2PYH4 1435 aa18.08■□□□□ 0.49
ARID1A-206ENST00000466382 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
ARID1A-206ENST00000466382 NAIPQ13075 1403 aa18.07■□□□□ 0.48
ARID1A-206ENST00000466382 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
ARID1A-206ENST00000466382 CHD1O14646 1710 aa18.04■□□□□ 0.48
ARID1A-206ENST00000466382 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
ARID1A-206ENST00000466382 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
ARID1A-206ENST00000466382 PTPRGP23470 1445 aa18.02■□□□□ 0.48
ARID1A-206ENST00000466382 ATP10BO94823 1461 aa18.02■□□□□ 0.47
ARID1A-206ENST00000466382 ABCA8O94911 1581 aa18.02■□□□□ 0.47
ARID1A-206ENST00000466382 PLEKHD1A6NEE1 506 aa17.98■□□□□ 0.47
ARID1A-206ENST00000466382 CFDP1Q9UEE9 299 aaPredicted RBP17.97■□□□□ 0.47
ARID1A-206ENST00000466382 KIF14Q15058 1648 aa17.97■□□□□ 0.47
ARID1A-206ENST00000466382 GPATCH8Q9UKJ3 1502 aaKnown RBP17.96■□□□□ 0.47
ARID1A-206ENST00000466382 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
ARID1A-206ENST00000466382 ABCC5O15440 1437 aa17.96■□□□□ 0.47
ARID1A-206ENST00000466382 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
ARID1A-206ENST00000466382 ZNF777Q9ULD5 760 aaPredicted RBP17.95■□□□□ 0.46
ARID1A-206ENST00000466382 DAPK1P53355 1430 aa17.94■□□□□ 0.46
ARID1A-206ENST00000466382 KDM6BO15054 1643 aa17.93■□□□□ 0.46
ARID1A-206ENST00000466382 SHROOM2Q13796 1616 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms