RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 IGF1RP08069 1367 aa28.2■■■□□ 2.1
LETM1-202ENST00000466175 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
LETM1-202ENST00000466175 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.09
LETM1-202ENST00000466175 SYNJ2O15056 1496 aa28.11■■■□□ 2.09
LETM1-202ENST00000466175 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
LETM1-202ENST00000466175 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
LETM1-202ENST00000466175 APLP2Q06481 763 aa28.07■■■□□ 2.08
LETM1-202ENST00000466175 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
LETM1-202ENST00000466175 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
LETM1-202ENST00000466175 CUL7Q14999 1698 aa28■■■□□ 2.07
LETM1-202ENST00000466175 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
LETM1-202ENST00000466175 ARHGAP35Q9NRY4 1499 aa27.92■■■□□ 2.06
LETM1-202ENST00000466175 RANGAP1P46060 587 aaPredicted RBP27.92■■■□□ 2.06
LETM1-202ENST00000466175 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
LETM1-202ENST00000466175 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
LETM1-202ENST00000466175 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
LETM1-202ENST00000466175 NUP160Q12769 1436 aa27.8■■■□□ 2.04
LETM1-202ENST00000466175 RIMBP3CA6NJZ7 1639 aa27.77■■■□□ 2.04
LETM1-202ENST00000466175 RIMBP3BA6NNM3 1639 aa27.77■■■□□ 2.04
LETM1-202ENST00000466175 RIMBP3Q9UFD9 1639 aa27.77■■■□□ 2.04
LETM1-202ENST00000466175 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
LETM1-202ENST00000466175 MAP3K1Q13233 1512 aa27.75■■■□□ 2.03
LETM1-202ENST00000466175 CTTNBP2Q8WZ74 1663 aa27.75■■■□□ 2.03
LETM1-202ENST00000466175 EFCAB5A4FU69 1503 aa27.74■■■□□ 2.03
LETM1-202ENST00000466175 CCER1Q8TC90 406 aaPredicted RBP27.74■■■□□ 2.03
LETM1-202ENST00000466175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.68■■■□□ 2.02
LETM1-202ENST00000466175 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
LETM1-202ENST00000466175 TIAM1Q13009 1591 aa27.59■■■□□ 2.01
LETM1-202ENST00000466175 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
LETM1-202ENST00000466175 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
LETM1-202ENST00000466175 KANK4Q5T7N3 995 aaPredicted RBP27.57■■■□□ 2
LETM1-202ENST00000466175 JPH4Q96JJ6 628 aa27.57■■■□□ 2
LETM1-202ENST00000466175 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
LETM1-202ENST00000466175 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
LETM1-202ENST00000466175 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
LETM1-202ENST00000466175 FYCO1Q9BQS8 1478 aa27.52■■■□□ 2
LETM1-202ENST00000466175 CFAP43Q8NDM7 1665 aa27.52■■■□□ 2
LETM1-202ENST00000466175 HNRNPUL2Q1KMD3 747 aaKnown RBP27.49■■□□□ 1.99
LETM1-202ENST00000466175 PCF11O94913 1555 aaKnown RBP27.49■■□□□ 1.99
LETM1-202ENST00000466175 FMN1Q68DA7 1419 aa27.48■■□□□ 1.99
LETM1-202ENST00000466175 IQGAP2Q13576 1575 aa27.48■■□□□ 1.99
LETM1-202ENST00000466175 SAMD9Q5K651 1589 aa27.48■■□□□ 1.99
LETM1-202ENST00000466175 CASKIN1Q8WXD9 1431 aa27.48■■□□□ 1.99
LETM1-202ENST00000466175 LRRC9Q6ZRR7 1453 aa27.45■■□□□ 1.99
LETM1-202ENST00000466175 FHOD3Q2V2M9 1422 aa27.45■■□□□ 1.98
LETM1-202ENST00000466175 CCNB3Q8WWL7 1395 aa27.4■■□□□ 1.98
LETM1-202ENST00000466175 P3H3Q8IVL6 736 aa27.36■■□□□ 1.97
LETM1-202ENST00000466175 UGGT2Q9NYU1 1516 aa27.3■■□□□ 1.96
LETM1-202ENST00000466175 DISP1Q96F81 1524 aa27.28■■□□□ 1.96
LETM1-202ENST00000466175 CLSPNQ9HAW4 1339 aa27.28■■□□□ 1.96
LETM1-202ENST00000466175 CARMIL2Q6F5E8 1435 aa27.27■■□□□ 1.96
LETM1-202ENST00000466175 KIAA0556O60303 1618 aa27.22■■□□□ 1.95
LETM1-202ENST00000466175 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
LETM1-202ENST00000466175 PTPRGP23470 1445 aa27.19■■□□□ 1.94
LETM1-202ENST00000466175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.19■■□□□ 1.94
LETM1-202ENST00000466175 PHLDB1Q86UU1 1377 aa27.18■■□□□ 1.94
LETM1-202ENST00000466175 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
LETM1-202ENST00000466175 HECW1Q76N89 1606 aa27.12■■□□□ 1.93
LETM1-202ENST00000466175 LRRIQ1Q96JM4 1722 aa27.11■■□□□ 1.93
LETM1-202ENST00000466175 ADCY10Q96PN6 1610 aa27.1■■□□□ 1.93
LETM1-202ENST00000466175 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
LETM1-202ENST00000466175 DHX57Q6P158 1386 aaKnown RBP27.09■■□□□ 1.93
LETM1-202ENST00000466175 EHBP1L1Q8N3D4 1523 aa27.09■■□□□ 1.93
LETM1-202ENST00000466175 SUPT6HQ7KZ85 1726 aaKnown RBP27.05■■□□□ 1.92
LETM1-202ENST00000466175 FGD6Q6ZV73 1430 aa27.01■■□□□ 1.91
LETM1-202ENST00000466175 SETD5Q9C0A6 1442 aa27■■□□□ 1.91
LETM1-202ENST00000466175 UACAQ9BZF9 1416 aa26.99■■□□□ 1.91
LETM1-202ENST00000466175 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
LETM1-202ENST00000466175 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
LETM1-202ENST00000466175 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
LETM1-202ENST00000466175 NCOA2Q15596 1464 aa26.97■■□□□ 1.91
LETM1-202ENST00000466175 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
LETM1-202ENST00000466175 ITGAEP38570 1179 aa26.96■■□□□ 1.91
LETM1-202ENST00000466175 EPRSP07814 1512 aaKnown RBP26.95■■□□□ 1.91
LETM1-202ENST00000466175 RAB3GAP2Q9H2M9 1393 aa26.95■■□□□ 1.9
LETM1-202ENST00000466175 MYOM3Q5VTT5 1437 aa26.94■■□□□ 1.9
LETM1-202ENST00000466175 ABCC2Q92887 1545 aa26.94■■□□□ 1.9
LETM1-202ENST00000466175 UHRF1BP1LA0JNW5 1464 aa26.91■■□□□ 1.9
LETM1-202ENST00000466175 ZNF316A6NFI3 1004 aaPredicted RBP26.9■■□□□ 1.9
LETM1-202ENST00000466175 ABCA8O94911 1581 aa26.9■■□□□ 1.9
LETM1-202ENST00000466175 ARID3CA6NKF2 412 aa26.87■■□□□ 1.89
LETM1-202ENST00000466175 MAGI3Q5TCQ9 1506 aa26.86■■□□□ 1.89
LETM1-202ENST00000466175 RAPGEF6Q8TEU7 1601 aa26.84■■□□□ 1.89
LETM1-202ENST00000466175 ZCCHC11Q5TAX3 1644 aaKnown RBP26.83■■□□□ 1.89
LETM1-202ENST00000466175 MAPKBP1O60336 1514 aa26.82■■□□□ 1.88
LETM1-202ENST00000466175 PTPN23Q9H3S7 1636 aa26.81■■□□□ 1.88
LETM1-202ENST00000466175 KDM5BQ9UGL1 1544 aa26.81■■□□□ 1.88
LETM1-202ENST00000466175 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
LETM1-202ENST00000466175 DIEXFQ68CQ4 756 aaKnown RBP26.8■■□□□ 1.88
LETM1-202ENST00000466175 CDK13Q14004 1512 aaKnown RBP26.78■■□□□ 1.88
LETM1-202ENST00000466175 MIA2Q96PC5 1412 aa26.78■■□□□ 1.88
LETM1-202ENST00000466175 ASXL2Q76L83 1435 aa26.76■■□□□ 1.87
LETM1-202ENST00000466175 NUP153P49790 1475 aaKnown RBP26.76■■□□□ 1.87
LETM1-202ENST00000466175 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
LETM1-202ENST00000466175 HFM1A2PYH4 1435 aa26.74■■□□□ 1.87
LETM1-202ENST00000466175 CDK11AQ9UQ88 783 aaPredicted RBP26.74■■□□□ 1.87
LETM1-202ENST00000466175 FAM69CQ0P6D2 419 aa26.71■■□□□ 1.87
LETM1-202ENST00000466175 ATP10BO94823 1461 aa26.7■■□□□ 1.87
LETM1-202ENST00000466175 ABCC10Q5T3U5 1492 aa26.7■■□□□ 1.86
LETM1-202ENST00000466175 DIP2BQ9P265 1576 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms