RNA–Protein interactions for RNA: ENST00000465864.1

KDM1A-203, Transcript of lysine demethylase 1A, humanhuman

TSL 5

Gene KDM1A, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-203ENST00000465864 ERCC6L2Q5T890 1561 aa13.91□□□□□ -0.18
KDM1A-203ENST00000465864 PRXQ9BXM0 1461 aa13.89□□□□□ -0.19
KDM1A-203ENST00000465864 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
KDM1A-203ENST00000465864 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
KDM1A-203ENST00000465864 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
KDM1A-203ENST00000465864 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
KDM1A-203ENST00000465864 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
KDM1A-203ENST00000465864 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
KDM1A-203ENST00000465864 EEA1Q15075 1411 aa13.81□□□□□ -0.2
KDM1A-203ENST00000465864 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
KDM1A-203ENST00000465864 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
KDM1A-203ENST00000465864 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
KDM1A-203ENST00000465864 IQGAP2Q13576 1575 aa13.77□□□□□ -0.21
KDM1A-203ENST00000465864 KIF21BO75037 1637 aa13.75□□□□□ -0.21
KDM1A-203ENST00000465864 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
KDM1A-203ENST00000465864 UGGT2Q9NYU1 1516 aa13.71□□□□□ -0.21
KDM1A-203ENST00000465864 TTBK1Q5TCY1 1321 aaPredicted RBP13.68□□□□□ -0.22
KDM1A-203ENST00000465864 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
KDM1A-203ENST00000465864 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
KDM1A-203ENST00000465864 KIAA0556O60303 1618 aa13.65□□□□□ -0.22
KDM1A-203ENST00000465864 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
KDM1A-203ENST00000465864 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
KDM1A-203ENST00000465864 TNIKQ9UKE5 1360 aa13.63□□□□□ -0.23
KDM1A-203ENST00000465864 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
KDM1A-203ENST00000465864 PTPRGP23470 1445 aa13.63□□□□□ -0.23
KDM1A-203ENST00000465864 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
KDM1A-203ENST00000465864 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
KDM1A-203ENST00000465864 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
KDM1A-203ENST00000465864 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
KDM1A-203ENST00000465864 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
KDM1A-203ENST00000465864 UACAQ9BZF9 1416 aa13.54□□□□□ -0.24
KDM1A-203ENST00000465864 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
KDM1A-203ENST00000465864 ABCA8O94911 1581 aa13.53□□□□□ -0.24
KDM1A-203ENST00000465864 ABCC2Q92887 1545 aa13.5□□□□□ -0.25
KDM1A-203ENST00000465864 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
KDM1A-203ENST00000465864 EFCAB5A4FU69 1503 aa13.48□□□□□ -0.25
KDM1A-203ENST00000465864 ZCCHC11Q5TAX3 1644 aaKnown RBP13.47□□□□□ -0.25
KDM1A-203ENST00000465864 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
KDM1A-203ENST00000465864 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
KDM1A-203ENST00000465864 KIF13AQ9H1H9 1805 aa13.47□□□□□ -0.25
KDM1A-203ENST00000465864 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
KDM1A-203ENST00000465864 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
KDM1A-203ENST00000465864 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
KDM1A-203ENST00000465864 ATP10BO94823 1461 aa13.44□□□□□ -0.26
KDM1A-203ENST00000465864 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
KDM1A-203ENST00000465864 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
KDM1A-203ENST00000465864 LRRIQ1Q96JM4 1722 aa13.42□□□□□ -0.26
KDM1A-203ENST00000465864 CLIP1P30622 1438 aa13.42□□□□□ -0.26
KDM1A-203ENST00000465864 ASXL2Q76L83 1435 aa13.42□□□□□ -0.26
KDM1A-203ENST00000465864 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
KDM1A-203ENST00000465864 ABCC10Q5T3U5 1492 aa13.39□□□□□ -0.27
KDM1A-203ENST00000465864 DIP2BQ9P265 1576 aa13.39□□□□□ -0.27
KDM1A-203ENST00000465864 FAM69CQ0P6D2 419 aa13.38□□□□□ -0.27
KDM1A-203ENST00000465864 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
KDM1A-203ENST00000465864 TSPOAP1O95153 1857 aa13.36□□□□□ -0.27
KDM1A-203ENST00000465864 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
KDM1A-203ENST00000465864 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
KDM1A-203ENST00000465864 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
KDM1A-203ENST00000465864 PCF11O94913 1555 aaKnown RBP13.35□□□□□ -0.27
KDM1A-203ENST00000465864 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
KDM1A-203ENST00000465864 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.28
KDM1A-203ENST00000465864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
KDM1A-203ENST00000465864 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
KDM1A-203ENST00000465864 PPRC1Q5VV67 1664 aaKnown RBP13.31□□□□□ -0.28
KDM1A-203ENST00000465864 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
KDM1A-203ENST00000465864 GLI2P10070 1586 aa13.3□□□□□ -0.28
KDM1A-203ENST00000465864 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
KDM1A-203ENST00000465864 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
KDM1A-203ENST00000465864 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
KDM1A-203ENST00000465864 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
KDM1A-203ENST00000465864 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
KDM1A-203ENST00000465864 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
KDM1A-203ENST00000465864 KIF14Q15058 1648 aa13.23□□□□□ -0.29
KDM1A-203ENST00000465864 ABCA9Q8IUA7 1624 aa13.23□□□□□ -0.29
KDM1A-203ENST00000465864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
KDM1A-203ENST00000465864 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
KDM1A-203ENST00000465864 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
KDM1A-203ENST00000465864 COL17A1Q9UMD9 1497 aaPredicted RBP13.21□□□□□ -0.3
KDM1A-203ENST00000465864 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
KDM1A-203ENST00000465864 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
KDM1A-203ENST00000465864 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
KDM1A-203ENST00000465864 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
KDM1A-203ENST00000465864 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
KDM1A-203ENST00000465864 CDC42BPBQ9Y5S2 1711 aa13.14□□□□□ -0.31
KDM1A-203ENST00000465864 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
KDM1A-203ENST00000465864 CDC42BPAQ5VT25 1732 aa13.12□□□□□ -0.31
KDM1A-203ENST00000465864 KDM6BO15054 1643 aa13.12□□□□□ -0.31
KDM1A-203ENST00000465864 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
KDM1A-203ENST00000465864 PLCH2O75038 1416 aa13.11□□□□□ -0.31
KDM1A-203ENST00000465864 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
KDM1A-203ENST00000465864 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
KDM1A-203ENST00000465864 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
KDM1A-203ENST00000465864 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
KDM1A-203ENST00000465864 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
KDM1A-203ENST00000465864 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
KDM1A-203ENST00000465864 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
KDM1A-203ENST00000465864 FANCAO15360 1455 aa13.07□□□□□ -0.32
KDM1A-203ENST00000465864 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
KDM1A-203ENST00000465864 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
KDM1A-203ENST00000465864 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms