RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 JPH4Q96JJ6 628 aa17.72■□□□□ 0.43
NPHP3-203ENST00000465756 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
NPHP3-203ENST00000465756 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.42
NPHP3-203ENST00000465756 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.41
NPHP3-203ENST00000465756 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
NPHP3-203ENST00000465756 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
NPHP3-203ENST00000465756 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
NPHP3-203ENST00000465756 IQGAP2Q13576 1575 aa17.58■□□□□ 0.4
NPHP3-203ENST00000465756 ARAP1Q96P48 1450 aa17.58■□□□□ 0.4
NPHP3-203ENST00000465756 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
NPHP3-203ENST00000465756 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
NPHP3-203ENST00000465756 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
NPHP3-203ENST00000465756 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
NPHP3-203ENST00000465756 PTPRGP23470 1445 aa17.53■□□□□ 0.4
NPHP3-203ENST00000465756 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
NPHP3-203ENST00000465756 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.39
NPHP3-203ENST00000465756 TTBK1Q5TCY1 1321 aaPredicted RBP17.46■□□□□ 0.39
NPHP3-203ENST00000465756 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
NPHP3-203ENST00000465756 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
NPHP3-203ENST00000465756 KIF21BO75037 1637 aa17.42■□□□□ 0.38
NPHP3-203ENST00000465756 UACAQ9BZF9 1416 aa17.36■□□□□ 0.37
NPHP3-203ENST00000465756 KIAA0556O60303 1618 aa17.34■□□□□ 0.37
NPHP3-203ENST00000465756 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.36
NPHP3-203ENST00000465756 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.36
NPHP3-203ENST00000465756 UHRF1BP1LA0JNW5 1464 aa17.32■□□□□ 0.36
NPHP3-203ENST00000465756 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
NPHP3-203ENST00000465756 PLB1Q6P1J6 1458 aa17.3■□□□□ 0.36
NPHP3-203ENST00000465756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
NPHP3-203ENST00000465756 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
NPHP3-203ENST00000465756 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
NPHP3-203ENST00000465756 ABCC2Q92887 1545 aa17.27■□□□□ 0.36
NPHP3-203ENST00000465756 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
NPHP3-203ENST00000465756 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
NPHP3-203ENST00000465756 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
NPHP3-203ENST00000465756 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
NPHP3-203ENST00000465756 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
NPHP3-203ENST00000465756 MAPKBP1O60336 1514 aa17.24■□□□□ 0.35
NPHP3-203ENST00000465756 ATP1B4Q9UN42 357 aaPredicted RBP17.2■□□□□ 0.34
NPHP3-203ENST00000465756 PLEKHD1A6NEE1 506 aa17.18■□□□□ 0.34
NPHP3-203ENST00000465756 ADCY10Q96PN6 1610 aa17.17■□□□□ 0.34
NPHP3-203ENST00000465756 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
NPHP3-203ENST00000465756 SAMD9Q5K651 1589 aa17.16■□□□□ 0.34
NPHP3-203ENST00000465756 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
NPHP3-203ENST00000465756 ASXL2Q76L83 1435 aa17.15■□□□□ 0.34
NPHP3-203ENST00000465756 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
NPHP3-203ENST00000465756 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
NPHP3-203ENST00000465756 ABCA8O94911 1581 aa17.12■□□□□ 0.33
NPHP3-203ENST00000465756 CLIP1P30622 1438 aa17.11■□□□□ 0.33
NPHP3-203ENST00000465756 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
NPHP3-203ENST00000465756 WDR7Q9Y4E6 1490 aa17.1■□□□□ 0.33
NPHP3-203ENST00000465756 KCNH8Q96L42 1107 aa17.08■□□□□ 0.33
NPHP3-203ENST00000465756 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
NPHP3-203ENST00000465756 APLP2Q06481 763 aa17.06■□□□□ 0.32
NPHP3-203ENST00000465756 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
NPHP3-203ENST00000465756 GLI2P10070 1586 aa17.06■□□□□ 0.32
NPHP3-203ENST00000465756 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
NPHP3-203ENST00000465756 DIP2BQ9P265 1576 aa17.04■□□□□ 0.32
NPHP3-203ENST00000465756 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
NPHP3-203ENST00000465756 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
NPHP3-203ENST00000465756 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
NPHP3-203ENST00000465756 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
NPHP3-203ENST00000465756 ATP10BO94823 1461 aa16.99■□□□□ 0.31
NPHP3-203ENST00000465756 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
NPHP3-203ENST00000465756 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
NPHP3-203ENST00000465756 NUP153P49790 1475 aaKnown RBP16.95■□□□□ 0.3
NPHP3-203ENST00000465756 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
NPHP3-203ENST00000465756 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
NPHP3-203ENST00000465756 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
NPHP3-203ENST00000465756 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
NPHP3-203ENST00000465756 KDM6BO15054 1643 aa16.92■□□□□ 0.3
NPHP3-203ENST00000465756 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
NPHP3-203ENST00000465756 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
NPHP3-203ENST00000465756 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
NPHP3-203ENST00000465756 TROQ12816 1431 aaPredicted RBP16.89■□□□□ 0.29
NPHP3-203ENST00000465756 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
NPHP3-203ENST00000465756 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
NPHP3-203ENST00000465756 NEO1Q92859 1461 aa16.87■□□□□ 0.29
NPHP3-203ENST00000465756 KIF14Q15058 1648 aa16.85■□□□□ 0.29
NPHP3-203ENST00000465756 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
NPHP3-203ENST00000465756 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
NPHP3-203ENST00000465756 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
NPHP3-203ENST00000465756 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.28
NPHP3-203ENST00000465756 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
NPHP3-203ENST00000465756 PCF11O94913 1555 aaKnown RBP16.8■□□□□ 0.28
NPHP3-203ENST00000465756 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
NPHP3-203ENST00000465756 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
NPHP3-203ENST00000465756 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
NPHP3-203ENST00000465756 DENND4BO75064 1496 aaPredicted RBP16.77■□□□□ 0.28
NPHP3-203ENST00000465756 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
NPHP3-203ENST00000465756 FANCAO15360 1455 aa16.76■□□□□ 0.27
NPHP3-203ENST00000465756 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
NPHP3-203ENST00000465756 PLCH2O75038 1416 aa16.75■□□□□ 0.27
NPHP3-203ENST00000465756 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
NPHP3-203ENST00000465756 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
NPHP3-203ENST00000465756 AKNAQ7Z591 1439 aa16.74■□□□□ 0.27
NPHP3-203ENST00000465756 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
NPHP3-203ENST00000465756 POGZQ7Z3K3 1410 aa16.71■□□□□ 0.27
NPHP3-203ENST00000465756 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.26
NPHP3-203ENST00000465756 ADGRL1O94910 1474 aa16.7■□□□□ 0.26
NPHP3-203ENST00000465756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms