RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 EEA1Q15075 1411 aa20.64■□□□□ 0.89
CHPF2-202ENST00000465601 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
CHPF2-202ENST00000465601 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
CHPF2-202ENST00000465601 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
CHPF2-202ENST00000465601 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
CHPF2-202ENST00000465601 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
CHPF2-202ENST00000465601 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
CHPF2-202ENST00000465601 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.88
CHPF2-202ENST00000465601 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
CHPF2-202ENST00000465601 IQGAP2Q13576 1575 aa20.5■□□□□ 0.87
CHPF2-202ENST00000465601 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
CHPF2-202ENST00000465601 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
CHPF2-202ENST00000465601 KIF21BO75037 1637 aa20.42■□□□□ 0.86
CHPF2-202ENST00000465601 CARMIL2Q6F5E8 1435 aa20.4■□□□□ 0.86
CHPF2-202ENST00000465601 UGGT2Q9NYU1 1516 aa20.39■□□□□ 0.85
CHPF2-202ENST00000465601 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
CHPF2-202ENST00000465601 DISP1Q96F81 1524 aa20.37■□□□□ 0.85
CHPF2-202ENST00000465601 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
CHPF2-202ENST00000465601 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
CHPF2-202ENST00000465601 PTPRGP23470 1445 aa20.33■□□□□ 0.84
CHPF2-202ENST00000465601 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
CHPF2-202ENST00000465601 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
CHPF2-202ENST00000465601 KIAA0556O60303 1618 aa20.3■□□□□ 0.84
CHPF2-202ENST00000465601 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
CHPF2-202ENST00000465601 ADCY10Q96PN6 1610 aa20.2■□□□□ 0.82
CHPF2-202ENST00000465601 NPM1P06748 294 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHPF2-202ENST00000465601 SAMD9Q5K651 1589 aa20.19■□□□□ 0.82
CHPF2-202ENST00000465601 UACAQ9BZF9 1416 aa20.18■□□□□ 0.82
CHPF2-202ENST00000465601 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
CHPF2-202ENST00000465601 PLB1Q6P1J6 1458 aa20.13■□□□□ 0.81
CHPF2-202ENST00000465601 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
CHPF2-202ENST00000465601 UHRF1BP1LA0JNW5 1464 aa20.12■□□□□ 0.81
CHPF2-202ENST00000465601 ABCC2Q92887 1545 aa20.12■□□□□ 0.81
CHPF2-202ENST00000465601 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
CHPF2-202ENST00000465601 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
CHPF2-202ENST00000465601 ABCA8O94911 1581 aa20.08■□□□□ 0.81
CHPF2-202ENST00000465601 ARHGAP35Q9NRY4 1499 aa20.06■□□□□ 0.8
CHPF2-202ENST00000465601 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
CHPF2-202ENST00000465601 KDM5BQ9UGL1 1544 aa20.03■□□□□ 0.8
CHPF2-202ENST00000465601 ARID3CA6NKF2 412 aa20.03■□□□□ 0.8
CHPF2-202ENST00000465601 ZCCHC11Q5TAX3 1644 aaKnown RBP20.01■□□□□ 0.79
CHPF2-202ENST00000465601 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
CHPF2-202ENST00000465601 FAM69CQ0P6D2 419 aa19.98■□□□□ 0.79
CHPF2-202ENST00000465601 CLIP1P30622 1438 aa19.98■□□□□ 0.79
CHPF2-202ENST00000465601 ASXL2Q76L83 1435 aa19.98■□□□□ 0.79
CHPF2-202ENST00000465601 KIF13AQ9H1H9 1805 aa19.97■□□□□ 0.79
CHPF2-202ENST00000465601 ABCC10Q5T3U5 1492 aa19.96■□□□□ 0.79
CHPF2-202ENST00000465601 ATP10BO94823 1461 aa19.95■□□□□ 0.78
CHPF2-202ENST00000465601 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
CHPF2-202ENST00000465601 ATP1B4Q9UN42 357 aaPredicted RBP19.94■□□□□ 0.78
CHPF2-202ENST00000465601 NUP153P49790 1475 aaKnown RBP19.93■□□□□ 0.78
CHPF2-202ENST00000465601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
CHPF2-202ENST00000465601 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
CHPF2-202ENST00000465601 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
CHPF2-202ENST00000465601 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
CHPF2-202ENST00000465601 KCNH8Q96L42 1107 aa19.89■□□□□ 0.77
CHPF2-202ENST00000465601 WDR7Q9Y4E6 1490 aa19.87■□□□□ 0.77
CHPF2-202ENST00000465601 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
CHPF2-202ENST00000465601 TSPOAP1O95153 1857 aa19.85■□□□□ 0.77
CHPF2-202ENST00000465601 HECW1Q76N89 1606 aa19.83■□□□□ 0.76
CHPF2-202ENST00000465601 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
CHPF2-202ENST00000465601 GLI2P10070 1586 aa19.82■□□□□ 0.76
CHPF2-202ENST00000465601 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
CHPF2-202ENST00000465601 CASKIN1Q8WXD9 1431 aa19.81■□□□□ 0.76
CHPF2-202ENST00000465601 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
CHPF2-202ENST00000465601 LRRIQ1Q96JM4 1722 aa19.78■□□□□ 0.76
CHPF2-202ENST00000465601 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
CHPF2-202ENST00000465601 MAP3K4Q9Y6R4 1608 aa19.73■□□□□ 0.75
CHPF2-202ENST00000465601 CDK11AQ9UQ88 783 aaPredicted RBP19.73■□□□□ 0.75
CHPF2-202ENST00000465601 CD109Q6YHK3 1445 aa19.72■□□□□ 0.75
CHPF2-202ENST00000465601 PPRC1Q5VV67 1664 aaKnown RBP19.71■□□□□ 0.75
CHPF2-202ENST00000465601 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
CHPF2-202ENST00000465601 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
CHPF2-202ENST00000465601 ABCA9Q8IUA7 1624 aa19.68■□□□□ 0.74
CHPF2-202ENST00000465601 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
CHPF2-202ENST00000465601 TROQ12816 1431 aaPredicted RBP19.65■□□□□ 0.74
CHPF2-202ENST00000465601 TEX14Q8IWB6 1497 aa19.64■□□□□ 0.73
CHPF2-202ENST00000465601 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
CHPF2-202ENST00000465601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHPF2-202ENST00000465601 KIF14Q15058 1648 aa19.6■□□□□ 0.73
CHPF2-202ENST00000465601 TTC37Q6PGP7 1564 aa19.6■□□□□ 0.73
CHPF2-202ENST00000465601 KDM6BO15054 1643 aa19.58■□□□□ 0.73
CHPF2-202ENST00000465601 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
CHPF2-202ENST00000465601 COL17A1Q9UMD9 1497 aaPredicted RBP19.55■□□□□ 0.72
CHPF2-202ENST00000465601 PLCH2O75038 1416 aa19.52■□□□□ 0.72
CHPF2-202ENST00000465601 MYO5CQ9NQX4 1742 aa19.51■□□□□ 0.71
CHPF2-202ENST00000465601 TIAM1Q13009 1591 aa19.5■□□□□ 0.71
CHPF2-202ENST00000465601 NEO1Q92859 1461 aa19.5■□□□□ 0.71
CHPF2-202ENST00000465601 FANCAO15360 1455 aa19.49■□□□□ 0.71
CHPF2-202ENST00000465601 PHLDB1Q86UU1 1377 aa19.49■□□□□ 0.71
CHPF2-202ENST00000465601 APLP2Q06481 763 aa19.48■□□□□ 0.71
CHPF2-202ENST00000465601 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
CHPF2-202ENST00000465601 AKNAQ7Z591 1439 aa19.48■□□□□ 0.71
CHPF2-202ENST00000465601 EHBP1L1Q8N3D4 1523 aa19.47■□□□□ 0.71
CHPF2-202ENST00000465601 KANK4Q5T7N3 995 aaPredicted RBP19.47■□□□□ 0.71
CHPF2-202ENST00000465601 ARAP3Q8WWN8 1544 aa19.46■□□□□ 0.71
CHPF2-202ENST00000465601 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
CHPF2-202ENST00000465601 RAPGEF3O95398 923 aa19.45■□□□□ 0.7
CHPF2-202ENST00000465601 ARHGAP5Q13017 1502 aa19.45■□□□□ 0.7
CHPF2-202ENST00000465601 MAP3K1Q13233 1512 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms